; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0012301 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0012301
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr01:8295812..8297868
RNA-Seq ExpressionCmc01g0012301
SyntenyCmc01g0012301
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0090.16Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQ+GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

KAA0042295.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0093.54Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI DLFDQLRGA LFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAKGVSVDPQK
        DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTLLSAKGVSVDPQK
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAKGVSVDPQK

Query:  VEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQN
        VEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVT PILALPVTGKD VIYC+ASRLGLGCVLMQ+
Subjt:  VEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQN

Query:  GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRL
        GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRL
Subjt:  GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRL

Query:  PKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        PKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  PKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0090.16Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQ+GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

TYK00844.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0090.3Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]0.0e+0090.16Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSE+SNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase0.0e+0090.16Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQ+GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

A0A5A7TLH7 Reverse transcriptase0.0e+0093.54Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI DLFDQLRGA LFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAKGVSVDPQK
        DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTLLSAKGVSVDPQK
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAKGVSVDPQK

Query:  VEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQN
        VEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVT PILALPVTGKD VIYC+ASRLGLGCVLMQ+
Subjt:  VEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQN

Query:  GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRL
        GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRL
Subjt:  GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRL

Query:  PKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        PKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  PKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

A0A5A7U2V7 Reverse transcriptase0.0e+0090.16Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQ+GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

A0A5D3BHI1 Reverse transcriptase0.0e+0090.16Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQ+GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

A0A5D3BS67 Reverse transcriptase0.0e+0090.3Show/hide
Query:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------
        MTQQE EDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAI+TPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ      
Subjt:  MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ------

Query:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE
                       RKEVVFRKPGFAEVVFRG+RKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFP+DLSGLPPDREIE
Subjt:  ---------------RKEVVFRKPGFAEVVFRGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIE

Query:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI
        FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSV PWG PVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPL RI+DLFDQLRGAALFSKI
Subjt:  FTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKI

Query:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------
        DLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRE HEEHLRIVLQTL            
Subjt:  DLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL------------

Query:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL
                     +SAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ+LKKRLVTAPILAL
Subjt:  -------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILAL

Query:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD
        PVTGKDYVIYC+ASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW      EKCHIFTDH SLKYIFDQKELNLRQRRWLELIKD
Subjt:  PVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKD

Query:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
        YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL
Subjt:  YDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.69.8e-7034.74Show/hide
Query:  KELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT
        +E++ Q+Q+++++G IR S  P+  P+  V KK         R+ IDYR+LN++T+ +++P+  ++++  +L     F+ IDL  G+HQ+++    ++KT
Subjt:  KELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT

Query:  TFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL-------------------------LSAKGV
         F T++GHYE+  MPFGL NAPA F   MN I    L+K  +V++DDI+V+S   + H + L +V + L                         L+  G+
Subjt:  TFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTL-------------------------LSAKGV

Query:  SVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSD-KCEQSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGL
          +P+K+EA+  +  P    E+++FLGL GYYR+FI +F+ +A P+T   +KN+K + ++ + + +F++LK  +   PIL +P   K + +  +AS + L
Subjt:  SVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSD-KCEQSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGL

Query:  GCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALK------IWEKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA
        G VL Q+G+ ++Y SR L EHE NY T + EL A+V A K      +     I +DH  L +++  K+ N +  RW   + ++D  I+Y  GK N VADA
Subjt:  GCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALK------IWEKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADA

Query:  LSR
        LSR
Subjt:  LSR

P20825 Retrovirus-related Pol polyprotein from transposon 2975.2e-7136.04Show/hide
Query:  APISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKIDLRS
        +PI    Y +A +   E++ Q+QE++++G IR S  P+  P   V KK         R+ IDYR+LN++TI ++YP+  ++++  +L     F+ IDL  
Subjt:  APISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKIDLRS

Query:  GYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAK------------
        G+HQ+++ E  I+KT F T+ GHYE+  MPFGL NAPA F   MN I    L+K  +V++DDI+++S     H   +++V   L  A             
Subjt:  GYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAK------------

Query:  -------------GVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCE--QSFQQLKKRLVTAPILALPV
                     G+  +P KV+A+V++  P    E+R+FLGL GYYR+FI +++ +A P+T+  +K  K + + K E  ++F++LK  ++  PIL LP 
Subjt:  -------------GVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCE--QSFQQLKKRLVTAPILALPV

Query:  TGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALK------IWEKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYD
          K +V+  +AS L LG VL QNG+ I++ SR L +HE NY   + EL A+V A K      +  +  I +DH  L+++ + KE   +  RW   + +Y 
Subjt:  TGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALK------IWEKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYD

Query:  CTIEYHPGKANVVADALSR
          I+Y  GK N VADALSR
Subjt:  CTIEYHPGKANVVADALSR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein3.5e-6735.18Show/hide
Query:  KEFLDVFPNDLSGLPPDRE---IEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIR
        +++ ++  NDL   P D     ++  IE+ PG       PY +     +E+   +Q+L+D  +I PS  P   PV+ V KKDGT RLC+DYR LNK TI 
Subjt:  KEFLDVFPNDLSGLPPDRE---IEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIR

Query:  NKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREF
        + +PL RI++L  ++  A +F+ +DL SGYHQ+ +   D  KT F T  G YE+ VMPFGL NAP+ F   M   F     +FV V++DDIL++S   E 
Subjt:  NKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREF

Query:  HEEHLRIVLQTLLSAK------------------GVSVDPQKV-------EAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFE
        H +HL  VL+ L +                    G S+  QK+        A+ ++  P +  + + FLG+  YYRRFI + S++A P+        K +
Subjt:  HEEHLRIVLQTLLSAK------------------GVSVDPQKV-------EAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFE

Query:  WSDKCEQSFQQLKKRLVTAPILALPVTGK-DYVIYCNASRLGLGCVLMQNGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKC
        W++K +++ ++LK  L  +P+L +P   K +Y +  +AS+ G+G VL +  N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +      +  
Subjt:  WSDKCEQSFQQLKKRLVTAPILALPVTGK-DYVIYCNASRLGLGCVLMQNGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKC

Query:  HIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR
         + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR
Subjt:  HIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus4.0e-7135.64Show/hide
Query:  EFLDVFPNDLSGLPPDREIEFTIELLPGTA-PISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKK-----DGTLRLCIDYRQLNKVT
        EF  +F   LSG+  +  ++   E+   T  PI    Y    +   E++ Q+ EL+  G IRPS  P+  P+  V KK     +   R+ +D+++LN VT
Subjt:  EFLDVFPNDLSGLPPDREIEFTIELLPGTA-PISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKK-----DGTLRLCIDYRQLNKVT

Query:  IRNKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDR
        I + YP+  IN     L  A  F+ +DL SG+HQ+ ++ESDI KT F T  G YEF  +PFGL NAPA+F  +++ I   ++ K   V+IDDI+V+S D 
Subjt:  IRNKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDR

Query:  EFHEEHLRIVLQTL-------------------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR---K
        + H ++LR+VL +L                         ++A G+  DP+KV A+     P S  E++ FLG+  YYR+FI+D++++A PLT LTR    
Subjt:  EFHEEHLRIVLQTL-------------------------LSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTR---K

Query:  NVKFEWSDKCE--------QSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQN----GNVIAYASRQLKEHECNYPTHDLELAAVVLALKI
        N+K   S K          QSF  LK  L ++ ILA P   K + +  +AS   +G VL Q+       IAY SR L + E NY T + E+ A++ +L  
Subjt:  NVKFEWSDKCE--------QSFQQLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQN----GNVIAYASRQLKEHECNYPTHDLELAAVVLALKI

Query:  WE-------KCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR
                    ++TDH  L +    +  N + +RW   I++Y+C + Y PGK+NVVADALSR
Subjt:  WE-------KCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR

Q99315 Transposon Ty3-G Gag-Pol polyprotein6.0e-6735.18Show/hide
Query:  KEFLDVFPNDLSGLPPDRE---IEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIR
        +++ ++  NDL   P D     ++  IE+ PG       PY +     +E+   +Q+L+D  +I PS  P   PV+ V KKDGT RLC+DYR LNK TI 
Subjt:  KEFLDVFPNDLSGLPPDRE---IEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIR

Query:  NKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREF
        + +PL RI++L  ++  A +F+ +DL SGYHQ+ +   D  KT F T  G YE+ VMPFGL NAP+ F   M   F     +FV V++DDIL++S   E 
Subjt:  NKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDREF

Query:  HEEHLRIVLQTLLSAK------------------GVSVDPQKV-------EAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFE
        H +HL  VL+ L +                    G S+  QK+        A+ ++  P +  + + FLG+  YYRRFI + S++A P+        K +
Subjt:  HEEHLRIVLQTLLSAK------------------GVSVDPQKV-------EAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFE

Query:  WSDKCEQSFQQLKKRLVTAPILALPVTGK-DYVIYCNASRLGLGCVLMQNGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKC
        W++K +++  +LK  L  +P+L +P   K +Y +  +AS+ G+G VL +  N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +      +  
Subjt:  WSDKCEQSFQQLKKRLVTAPILALPVTGK-DYVIYCNASRLGLGCVLMQNGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIW------EKC

Query:  HIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR
         + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR
Subjt:  HIFTDHNSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein4.8e-1946.07Show/hide
Query:  LLSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILALP
        ++S +GVS DP K+EA+V W  P + TE+R FLGL GYYRRF++++ ++  PLT L +KN   +W++    +F+ LK  + T P+LALP
Subjt:  LLSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQQLKKRLVTAPILALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAACAAGAAGCGGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGT
TTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATACACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTA
ATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGAAAGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTT
AGAGGTGTGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAG
AGAAAAGCTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAAATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAAT
TATTACCAGGAACAGCACCTATTTCACAGGCCCCGTATAGAATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGG
CCTAGTGTTTTGCCATGGGGAGTACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAA
GTATCCTTTACTACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAG
ATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATC
TTCCATCGGTATTTAGATAAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAATTTCATGAGGAACATCTGAGGATTGTTCTACAGACTCT
ACTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGAT
ACTATAGGCGTTTTATTGAGGACTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAG
CAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTAATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTAT
GCAAAATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCT
GGGAAAAGTGCCATATTTTCACAGATCATAATAGTCTGAAGTATATTTTTGATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGAT
TGTACTATAGAGTATCATCCAGGTAAGGCCAATGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAA
TGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAATCAG
AAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCAACAAGAAGCGGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGT
TTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATACACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTA
ATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGAAAGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTT
AGAGGTGTGAGGAAGGCCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAG
AGAAAAGCTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAAATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAAT
TATTACCAGGAACAGCACCTATTTCACAGGCCCCGTATAGAATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGG
CCTAGTGTTTTGCCATGGGGAGTACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAA
GTATCCTTTACTACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAG
ATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATC
TTCCATCGGTATTTAGATAAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAATTTCATGAGGAACATCTGAGGATTGTTCTACAGACTCT
ACTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGAT
ACTATAGGCGTTTTATTGAGGACTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAG
CAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTAATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTAT
GCAAAATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCT
GGGAAAAGTGCCATATTTTCACAGATCATAATAGTCTGAAGTATATTTTTGATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGAT
TGTACTATAGAGTATCATCCAGGTAAGGCCAATGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAA
TGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAATCAG
AAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTATAG
Protein sequenceShow/hide protein sequence
MTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIHTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQRKEVVFRKPGFAEVVF
RGVRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPNDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIR
PSVLPWGVPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLLRINDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRI
FHRYLDKFVIVFIDDILVYSVDREFHEEHLRIVLQTLLSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQ
QLKKRLVTAPILALPVTGKDYVIYCNASRLGLGCVLMQNGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWEKCHIFTDHNSLKYIFDQKELNLRQRRWLELIKDYD
CTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGL