| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0057168.1 pol protein [Cucumis melo var. makuwa] | 3.0e-102 | 91.26 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
M LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGY QLRIRDSDIPKT FC RYGHYEFI+MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHLRQVLETLRAN+LYAKFSKCEFWLKKV+FLGHVVSSEGVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.0e-102 | 91.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRDSDIPKTAF RYGHYEFI+MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSS+GVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| KAA0066264.1 pol protein [Cucumis melo var. makuwa] | 6.1e-103 | 91.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRD DIPKTAF RYGHYEF++MSFGLTNA AVFMDLMN VFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IAIPLT
Subjt: IAIPLT
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 1.0e-102 | 92.23 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRDSDIPKTAF RYGHYEFI+MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| TYK05193.1 pol protein [Cucumis melo var. makuwa] | 1.8e-102 | 91.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRD DIPKTAF RYGHYEF++MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPTKIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UPX4 Pol protein | 1.5e-102 | 91.26 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
M LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGY QLRIRDSDIPKT FC RYGHYEFI+MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHLRQVLETLRAN+LYAKFSKCEFWLKKV+FLGHVVSSEGVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| A0A5A7VG30 Reverse transcriptase | 3.0e-103 | 91.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRD DIPKTAF RYGHYEF++MSFGLTNA AVFMDLMN VFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IAIPLT
Subjt: IAIPLT
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| A0A5A7VK60 Reverse transcriptase | 1.5e-102 | 91.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRDSDIPKTAF RYGHYEFI+MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSS+GVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| A0A5D3BSV9 Reverse transcriptase | 5.0e-103 | 92.23 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRDSDIPKTAF RYGHYEFI+MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP KIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| A0A5D3BZN1 Reverse transcriptase | 8.6e-103 | 91.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL SGY QLRIRD DIPKTAF RYGHYEF++MSFGLTNA AVFMDLMN VFKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFV
Query: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
IVFIDDILIYSKTEAEHEEHL QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPTKIE+VT WPRPSTVSE+RSFLGLAGYYRRFV+DFSR
Subjt: IVFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSR
Query: IAIPLT
IA PLT
Subjt: IAIPLT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.2e-45 | 40.49 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+ Q+ + + KTAF ++GHYE++ M FGL NA A F MN++ + L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
Query: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
V++DDI+++S + EH + L V E L L + KCEF ++ TFLGHV++ +G+ +P KIE++ +P P+ E+++FLGL GYYR+F+ +F+ I
Subjt: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
Query: AIPLT
A P+T
Subjt: AIPLT
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 3.1e-41 | 39.51 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
RL ID+R+LN+ T+ +RYP+P I + L A F+ +DL SGY Q+ + + D KT+F G YEF + FGL NA ++F +++V ++ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
Query: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
V++DD++I+S+ E++H H+ VL+ L + K F+ + V +LG +VS +G DP K++++ +P P V +VRSFLGLA YYR F+KDF+ I
Subjt: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
Query: AIPLT
A P+T
Subjt: AIPLT
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 9.3e-46 | 40 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+ Q+ + + I KTAF + GHYE++ M FGL NA A F MNN+ + L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
Query: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
V++DDI+I+S + EH ++ V L L + KCEF K+ FLGH+V+ +G+ +P K++++ ++P P+ E+R+FLGL GYYR+F+ +++ I
Subjt: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
Query: AIPLT
A P+T
Subjt: AIPLT
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.6e-42 | 37.56 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+ Q+ +++SDIPKTAF G YEF+ + FGL NA A+F +++++ ++ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
Query: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
V+IDDI+++S+ H ++LR VL +L L K F +V FLG++V+++G+ DP K+ +++ P P++V E++ FLG+ YYR+F++D++++
Subjt: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
Query: AIPLT
A PLT
Subjt: AIPLT
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 5.3e-41 | 41.67 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGY Q+ + D KTAF G YE+ +M FGL NA + F M + F+D FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYDQLRIRDSDIPKTAFCFRYGHYEFIMMSFGLTNAHAVFMDLMNNVFKDFLDMFVI
Query: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
V++DDILI+S++ EH +HL VLE L+ L K KC+F ++ FLG+ + + ++ K ++ +P P TV + + FLG+ YYRRF+ + S+I
Subjt: VFIDDILIYSKTEAEHEEHLRQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIESVTTWPRPSTVSEVRSFLGLAGYYRRFVKDFSRI
Query: AIPL
A P+
Subjt: AIPL
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