| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031895.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.0e-122 | 83.81 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR---------V
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR V
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR---------V
Query: SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSF
SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+ TPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSF
Subjt: SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSF
Query: VIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLLRK
VIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKS +K
Subjt: VIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLLRK
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| KAA0036553.1 pol protein [Cucumis melo var. makuwa] | 2.3e-117 | 76.49 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRIKD D+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+ TPLTQLTRKGAPFVWSKACED
Subjt: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
Query: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
SFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS
Subjt: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
Query: RK
+K
Subjt: RK
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 2.3e-117 | 72 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+
Subjt: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
Query: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
TPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Query: RHYLYGEKIQIFTDHKSFNTSLLRK
RHYLYGEKIQIFTDHKS +K
Subjt: RHYLYGEKIQIFTDHKSFNTSLLRK
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| KAA0051368.1 pol protein [Cucumis melo var. makuwa] | 7.2e-119 | 76.82 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSK DLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+ TPLTQLTRKGAPFVWSKACED
Subjt: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
Query: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
SFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS
Subjt: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
Query: RK
+K
Subjt: RK
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 6.1e-118 | 72.31 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+
Subjt: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
Query: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Query: RHYLYGEKIQIFTDHKSFNTSLLRK
RHYLYGEKIQIFTDHKS +K
Subjt: RHYLYGEKIQIFTDHKSFNTSLLRK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRV9 Reverse transcriptase | 3.4e-122 | 83.81 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR---------V
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR V
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR---------V
Query: SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSF
SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+ TPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSF
Subjt: SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSF
Query: VIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLLRK
VIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKS +K
Subjt: VIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLLRK
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| A0A5A7T0Y9 Reverse transcriptase | 1.1e-117 | 76.49 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRIKD D+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+ TPLTQLTRKGAPFVWSKACED
Subjt: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
Query: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
SFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS
Subjt: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
Query: RK
+K
Subjt: RK
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| A0A5A7T190 Reverse transcriptase | 1.1e-117 | 72 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+
Subjt: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
Query: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
TPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Query: RHYLYGEKIQIFTDHKSFNTSLLRK
RHYLYGEKIQIFTDHKS +K
Subjt: RHYLYGEKIQIFTDHKSFNTSLLRK
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| A0A5A7U7V9 Reverse transcriptase | 3.5e-119 | 76.82 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSK DLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+ TPLTQLTRKGAPFVWSKACED
Subjt: -----------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT-----------------------TPLTQLTRKGAPFVWSKACED
Query: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
SFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS
Subjt: SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSFNTSLL
Query: RK
+K
Subjt: RK
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| A0A5D3BPI1 Reverse transcriptase | 3.0e-118 | 72.31 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNR
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNR----------
Query: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV+
Subjt: ----------------------------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVT---------------------
Query: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt: --TPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Query: RHYLYGEKIQIFTDHKSFNTSLLRK
RHYLYGEKIQIFTDHKS +K
Subjt: RHYLYGEKIQIFTDHKSFNTSLLRK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.9e-37 | 31.65 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRV----------
R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + E + KTAF +++GHYE++ M FGL NA A F MN +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRV----------
Query: ----------------------------------------------SFLGHVVSKAGVSVDPAKIEAV------------------TGWTRP-----STV
+FLGHV++ G+ +P KIEA+ TG+ R + +
Subjt: ----------------------------------------------SFLGHVVSKAGVSVDPAKIEAV------------------TGWTRP-----STV
Query: TTPLTQLTRKGAPFVWSKACEDS-FQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
P+T+ +K + DS F+ LK + P+L VPD + F + +DAS LG VL Q G ++Y SR L HE NY T + EL A+V+A K +
Subjt: TTPLTQLTRKGAPFVWSKACEDS-FQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Query: RHYLYGEKIQIFTDHK
RHYL G +I +DH+
Subjt: RHYLYGEKIQIFTDHK
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.2e-31 | 29.78 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNA-------------------LA
RL IDYR++NK + +++PLPRIDD+ DQL A FS +DL SG+HQ+ + + T+F + G Y F + FGL A
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNA-------------------LA
Query: VFMD-------------------------------------LMNRVSFLGHVVSKAGVSVDPAKIEAVTGWTRP-----------------------STV
++MD M+ V+FLGH + G+ D K + + + P +
Subjt: VFMD-------------------------------------LMNRVSFLGHVVSKAGVSVDPAKIEAVTGWTRP-----------------------STV
Query: TTPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ-----QGVVAYASRQLKSHEQNYPTHDLELAAVVFAL
+ +T+L +K PF W+ C+ +F LK +L+ +L PD S F I +DASK+ G VL Q Q VAYASR E N T + ELAA+ +A+
Subjt: TTPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ-----QGVVAYASRQLKSHEQNYPTHDLELAAVVFAL
Query: KIWRHYLYGEKIQIFTDHK
+R Y+YG+ + TDH+
Subjt: KIWRHYLYGEKIQIFTDHK
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 7.7e-31 | 29.29 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVF-----------------
RL ID+R+LN+ T+ +RYP+P I + L A F+ +DL+SGYHQ+ + + D KT+F G YEF + FGL NA ++F
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVF-----------------
Query: ---------------------------MDLMNRVS------------FLGHVVSKAGVSVDPAKIEAVTGWTRP-----------------------STV
+D RVS +LG +VSK G DP K++A+ + P + +
Subjt: ---------------------------MDLMNRVS------------FLGHVVSKAGVSVDPAKIEAVTGWTRP-----------------------STV
Query: TTPLTQLTR-----------KGAPFVWSKACEDSFQTLKQKLVTAPV-LTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLE
P+T + + K P +++ ++FQ L+ L + V L PD F + +DAS G+G VL Q+G + SR LK EQNY T++ E
Subjt: TTPLTQLTR-----------KGAPFVWSKACEDSFQTLKQKLVTAPV-LTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLE
Query: LAAVVFALKIWRHYLYGEK-IQIFTDHKSFNTSLLRKN
L A+V+AL +++LYG + I IFTDH+ ++ +N
Subjt: LAAVVFALKIWRHYLYGEK-IQIFTDHKSFNTSLLRKN
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.2e-37 | 29.75 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRV----------
R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + +E I KTAF ++ GHYE++ M FGL NA A F MN +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRV----------
Query: ----------------------------------------------SFLGHVVSKAGVSVDPAKIEAVTGWTRP-----------------------STV
+FLGH+V+ G+ +P K++A+ + P + +
Subjt: ----------------------------------------------SFLGHVVSKAGVSVDPAKIEAVTGWTRP-----------------------STV
Query: TTPLTQLTRKGAPFVWSK-ACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
P+T +K K ++F+ LK ++ P+L +PD FV+ +DAS LG VL Q G +++ SR L HE NY + EL A+V+A K +
Subjt: TTPLTQLTRKGAPFVWSK-ACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-VVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Query: RHYLYGEKIQIFTDHK
RHYL G + I +DH+
Subjt: RHYLYGEKIQIFTDHK
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 7.0e-32 | 28.45 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMN------------
R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +K+ DIPKTAF + G YEF+ + FGL NA A+F +++
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMN------------
Query: --------------------------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST-----------------------V
+V FLG++V+ G+ DP K+ A++ P++ V
Subjt: --------------------------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST-----------------------V
Query: TTPLTQLTR-----------KGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ--QG---VVAYASRQLKSHEQNYPTH
PLT LTR P + SF LK L ++ +L P + F + +DAS +G VL Q QG +AY SR L E+NY T
Subjt: TTPLTQLTR-----------KGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ--QG---VVAYASRQLKSHEQNYPTH
Query: DLELAAVVFALKIWRHYLYGE-KIQIFTDHKSFNTSLLRKN
+ E+ A++++L R YLYG I+++TDH+ +L +N
Subjt: DLELAAVVFALKIWRHYLYGE-KIQIFTDHKSFNTSLLRKN
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