; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0014101 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0014101
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr01:10995864..11001919
RNA-Seq ExpressionCmc01g0014101
SyntenyCmc01g0014101
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]6.1e-7696.64Show/hide
Query:  QTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAE
        +TARD EEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIA WQREKMEIESSLHKRLY +
Subjt:  QTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAE

Query:  LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
        LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
Subjt:  LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-7695.39Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        + SQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAG  RPSKKRR YSGDLMDTFRASMRETSKEIGKIA WQREKMEIESSLHKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
        Y ELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-6190.51Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        M  Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMAHD GSS+PSKKRRSYS DLMDTFRASMRETSKEI KIA WQREKMEIESS+HKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA
        YAELQTIPGMDVDDCLIV ESLLPDP MLH FLDYPA
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]1.6e-6899.26Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSM HDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP
        YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]1.1e-6190.51Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        M  Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMAHD GSS+PSKKRRSYS DLMDTFRASMRETSKEI KIA WQREKMEIESS+HKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA
        YAELQTIPGMDVDDCLIV ESLLPDP MLH FLDYPA
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992485.4e-6290.51Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        M  Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMAHD GSS+PSKKRRSYS DLMDTFRASMRETSKEI KIA WQREKMEIESS+HKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA
        YAELQTIPGMDVDDCLIV ESLLPDP MLH FLDYPA
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA

A0A5A7U7F7 Retrotransposon protein3.0e-7696.64Show/hide
Query:  QTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAE
        +TARD EEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIA WQREKMEIESSLHKRLY +
Subjt:  QTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAE

Query:  LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
        LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
Subjt:  LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP

A0A5A7VG45 Retrotransposon protein1.7e-7695.39Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        + SQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAG  RPSKKRR YSGDLMDTFRASMRETSKEIGKIA WQREKMEIESSLHKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
        Y ELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP

A0A5A7VGQ0 Retrotransposon protein5.4e-6290.51Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        M  Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMAHD GSS+PSKKRRSYS DLMDTFRASMRETSKEI KIA WQREKMEIESS+HKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA
        YAELQTIPGMDVDDCLIV ESLLPDP MLH FLDYPA
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPA

A0A5D3C7T4 Uncharacterized protein7.8e-6999.26Show/hide
Query:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
        MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSM HDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL
Subjt:  MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRL

Query:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP
        YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP
Subjt:  YAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCACAGACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACAT
GCCATCTACTCCAACAAGTATGGCGCATGATGCGGGATCATCTAGGCCAAGTAAGAAAAGACGATCATATTCAGGAGACCTTATGGACACGTTTCGCGCAAGTATGCGAG
AAACTTCCAAGGAAATTGGAAAGATTGCTACATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGCTGAATTACAGACTATTCCTGGAATG
GACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTACCTGATCCCACGATGTTGCACGCATTCCTTGACTACCCAGCAGAATGGAAGTATAGAAAATGCATGCGTAT
TTTAGGAAGGCAACCATAA
mRNA sequenceShow/hide mRNA sequence
GTTTATCCTCTATGTTAATGTCAAGCCCACGTTTGGCTCACGGTCTAAAACAATGGGATTAAGAGAGGGGGTAAATAGGCGGTTTAATTTTTTTACAAAAAAAAAAAAGA
AAAAAACCTTTCTCCTCCTAATTTCTTCTCAATCTTTCATAGTCTCTCTCATCTCTTCTTCTTCGCGCATCAAACCCTAGTCGCTCTTGATCTCCTTGCGTCTTCATCTC
TTCTAATTTCTCTTCTGTCTCTTTTTCTTTTTCTCATACAAAGAAGCAAGATGTCAAGAACAAGGATTTATGGAAGTTCCTACGGTATCTACTCCAAGAAAGAGAAGTTG
GAGCTTGAAGGTGATCAATACAAGTGTTTGTCTTAGCCTTGCCTTGCATAGTCACACCATCACATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCAT
TGAGGATGAGGTGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTATAAGTACAAAAACTAA
TGAAAGAAAAAATTCCTGGAAGCAACATACAAGTGACTCCAAATTTAGAGTCGAGAGTAAAAATTTTAAAGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCT
TGTAGTGGGTTTGGCTGAAATGAGGGACAAAAGTGCATTGAGGCAGAGAAACCCGTGTTCGATGATTGGGTTAAGGGACACCCCAATGCTCAAGGCCTACTAAATAAACC
ATTTCCTTACTTCTATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTGTTGAAATGAGCTCACAGACTGCAAGAGATACTGAGG
AAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCCATCTACTCCAACAAGTATGGCGCATGAT
GCGGGATCATCTAGGCCAAGTAAGAAAAGACGATCATATTCAGGAGACCTTATGGACACGTTTCGCGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTAC
ATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGCTGAATTACAGACTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGT
CTCTATTACCTGATCCCACGATGTTGCACGCATTCCTTGACTACCCAGCAGAATGGAAGTATAGAAAATGCATGCGTATTTTAGGAAGGCAACCATAA
Protein sequenceShow/hide protein sequence
MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGM
DVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP