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Cmc01g0014311 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0014311
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr01:11230002..11231095
RNA-Seq ExpressionCmc01g0014311
SyntenyCmc01g0014311
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]7.9e-6175.46Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTCRVWDLDEIPCAH LAVL                           +  
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKK HSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

KAA0059897.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]7.9e-6175.46Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTCRVWDLDEIPCAH LAVL                           +  
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKK HSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

KAA0065296.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.4e-6075.46Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTC VWDLDEIPCAH LAVL R                            
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKR+AGRPRKQRILSIGEKKSHSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.6e-6176.07Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTCRVWDLDEIPCAH LAVL                           +  
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

XP_008467000.1 PREDICTED: uncharacterized protein LOC103504407, partial [Cucumis melo]2.2e-6388.49Show/hide
Query:  VNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHLVENHANWKSIGIENNILPPTFKRR
        VNAINDVEFQVI GRKQFIV LDCKSCTCRVWDLD+IPCAH LAVL  R+MNTYSFVSKYFLSSTLISTYTGSV  V NHANWKSIGIENNILPPTFKRR
Subjt:  VNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHLVENHANWKSIGIENNILPPTFKRR

Query:  AGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        AG+ +KQRILSIGEKKSHSRC HCHRAGHNRRNCKF  F
Subjt:  AGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044071.1e-6388.49Show/hide
Query:  VNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHLVENHANWKSIGIENNILPPTFKRR
        VNAINDVEFQVI GRKQFIV LDCKSCTCRVWDLD+IPCAH LAVL  R+MNTYSFVSKYFLSSTLISTYTGSV  V NHANWKSIGIENNILPPTFKRR
Subjt:  VNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHLVENHANWKSIGIENNILPPTFKRR

Query:  AGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        AG+ +KQRILSIGEKKSHSRC HCHRAGHNRRNCKF  F
Subjt:  AGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like3.8e-6175.46Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTCRVWDLDEIPCAH LAVL                           +  
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKK HSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like3.8e-6175.46Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTCRVWDLDEIPCAH LAVL                           +  
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKK HSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like6.6e-6175.46Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTC VWDLDEIPCAH LAVL R                            
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKR+AGRPRKQRILSIGEKKSHSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like7.7e-6276.07Show/hide
Query:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL
        MR VLT WAEGELRIQHQNSRSFTVNAINDVEFQVI+GRKQFIV LDCKSCTCRVWDLDEIPCAH LAVL                           +  
Subjt:  MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHL

Query:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF
        V NHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRC HCHRAGHNRRNCKF  F
Subjt:  VENHANWKSIGIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATTGTTTTAACTTGTTGGGCTGAGGGAGAATTACGAATACAACATCAAAACTCAAGAAGCTTCACAGTTAATGCTATTAATGATGTTGAATTTCAAGTGATTAA
TGGAAGAAAACAATTTATTGTATGGTTAGATTGCAAATCATGTACTTGTCGCGTTTGGGATCTTGATGAAATTCCATGCGCCCACGTTCTTGCTGTTCTTTGTCGGCGTA
ATATGAATACTTACTCTTTTGTTTCCAAGTATTTTTTGTCAAGTACTTTGATTTCAACTTATACTGGATCAGTTCATCTGGTTGAGAACCATGCTAATTGGAAGTCTATT
GGGATTGAGAATAACATACTACCTCCAACTTTCAAGCGTCGAGCAGGACGACCGCGAAAACAAAGAATACTATCAATTGGCGAGAAGAAAAGTCACTCAAGATGCATTCA
TTGTCATCGTGCTGGTCACAATCGTAGAAATTGCAAATTTACCATTTTTAGAGTGACGTGA
mRNA sequenceShow/hide mRNA sequence
TGGTAATATCTTATCGACATTTAAGTATCCCAAAAAGTGTTCATAATGTTTTTTCAAATACTTAATATTGCGTTTGTTTGCAACACCTTCTAAAAATTTGAAGTTCATAT
ATAAGGACCCTATAATTGATAAGCTCTTTTTTAGATGTGGAAAAACATATACAGTTGTTGATTTTGAGACTAATATGAGATGGATGAAGTCTATGTATCCTAGTATACGA
GACTATCTTAGTAAGGTTAGTTTTGAAAAGTGGGCTCGAGCATACTGTACATGGAAAAGATATCAAATGATGACTACAAAAATTTTAGAAAGCTTAAATGCAGTTCTAAA
AGAATCTAGAGATTTTCTTGTTGCAGCATTACTCGATTCTATCAGACAAATACTTCAAAATTGGTTTTATGATCGGAGATAAGTTGAATGTTGTATGAGAATTGTTTTAA
CTTGTTGGGCTGAGGGAGAATTACGAATACAACATCAAAACTCAAGAAGCTTCACAGTTAATGCTATTAATGATGTTGAATTTCAAGTGATTAATGGAAGAAAACAATTT
ATTGTATGGTTAGATTGCAAATCATGTACTTGTCGCGTTTGGGATCTTGATGAAATTCCATGCGCCCACGTTCTTGCTGTTCTTTGTCGGCGTAATATGAATACTTACTC
TTTTGTTTCCAAGTATTTTTTGTCAAGTACTTTGATTTCAACTTATACTGGATCAGTTCATCTGGTTGAGAACCATGCTAATTGGAAGTCTATTGGGATTGAGAATAACA
TACTACCTCCAACTTTCAAGCGTCGAGCAGGACGACCGCGAAAACAAAGAATACTATCAATTGGCGAGAAGAAAAGTCACTCAAGATGCATTCATTGTCATCGTGCTGGT
CACAATCGTAGAAATTGCAAATTTACCATTTTTAGAGTGACGTGA
Protein sequenceShow/hide protein sequence
MRIVLTCWAEGELRIQHQNSRSFTVNAINDVEFQVINGRKQFIVWLDCKSCTCRVWDLDEIPCAHVLAVLCRRNMNTYSFVSKYFLSSTLISTYTGSVHLVENHANWKSI
GIENNILPPTFKRRAGRPRKQRILSIGEKKSHSRCIHCHRAGHNRRNCKFTIFRVT