; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0014601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0014601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationCMiso1.1chr01:11605289..11606987
RNA-Seq ExpressionCmc01g0014601
SyntenyCmc01g0014601
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02449.1 F15O4.13 [Cucumis melo var. makuwa]1.0e-27686.42Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+RELLVKEAHGGGLMGHFGEFKTYS+LCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDDATNIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNRAIHSTTHCSPFEVVYG N LTPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT
        R ERFPDQRKSKLQQ+GDGPFQVLERINNNAYKLDLRGKYN   T
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT

TYK04936.1 F15O4.13 [Cucumis melo var. makuwa]5.2e-26584.67Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+REL VKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAK KTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDD  NIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQT+GQTEV+NRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNR IH+TTHCSPFEVVYG N LTPLDLSPL  NMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRK+LIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLD
        R ERFPDQRKSKLQQRGD PFQVLERINNNAYK D
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLD

TYK08102.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.7e-28292.56Show/hide
Query:  MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESL
        MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNG QLNY TCDKELHALVRALKVWQHYLWPKEFVIHTDHESL
Subjt:  MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESL

Query:  KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGK----------------DNMVVDALSRRKGKLCIPKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEH
        KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGK                D +V D +  RKGKLCIPKCS+RELLVKEAHGGGLMGHFGEFKTYSMLCEH
Subjt:  KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGK----------------DNMVVDALSRRKGKLCIPKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEH

Query:  FYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRL
        FYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVV+DRFSKMAHFIPCNKTDDATNIANLFFREVVRL
Subjt:  FYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRL

Query:  HDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHL
        H IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQ DGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYG N L
Subjt:  HDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHL

Query:  TPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKL
        TPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHLR ERFPDQRKSKLQQRGDGPFQVLERINNNAYKL
Subjt:  TPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKL

Query:  DLRGKYNAMKT
        DLRGKYN   T
Subjt:  DLRGKYNAMKT

TYK22420.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.2e-27786.79Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+RELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDDATNIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNRAIHSTTHCSPFEVVYG N LTPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT
        R ERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYN   T
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT

TYK26105.1 F15O4.13 [Cucumis melo var. makuwa]1.6e-27486.99Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+RELLVKEAHGGGLMGHFGEFKTYS+LCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDDATNIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNRAIHSTTHCSPFEVVYG N LTPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG
        R ERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG

TrEMBL top hitse value%identityAlignment
A0A5D3BWE8 F15O4.134.8e-27786.42Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+RELLVKEAHGGGLMGHFGEFKTYS+LCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDDATNIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNRAIHSTTHCSPFEVVYG N LTPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT
        R ERFPDQRKSKLQQ+GDGPFQVLERINNNAYKLDLRGKYN   T
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT

A0A5D3C3D3 F15O4.132.5e-26584.67Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+REL VKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAK KTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDD  NIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQT+GQTEV+NRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNR IH+TTHCSPFEVVYG N LTPLDLSPL  NMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRK+LIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLD
        R ERFPDQRKSKLQQRGD PFQVLERINNNAYK D
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLD

A0A5D3C9X5 Transposon Ty3-I Gag-Pol polyprotein1.3e-28292.56Show/hide
Query:  MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESL
        MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNG QLNY TCDKELHALVRALKVWQHYLWPKEFVIHTDHESL
Subjt:  MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESL

Query:  KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGK----------------DNMVVDALSRRKGKLCIPKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEH
        KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGK                D +V D +  RKGKLCIPKCS+RELLVKEAHGGGLMGHFGEFKTYSMLCEH
Subjt:  KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGK----------------DNMVVDALSRRKGKLCIPKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEH

Query:  FYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRL
        FYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVV+DRFSKMAHFIPCNKTDDATNIANLFFREVVRL
Subjt:  FYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRL

Query:  HDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHL
        H IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQ DGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYG N L
Subjt:  HDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHL

Query:  TPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKL
        TPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHLR ERFPDQRKSKLQQRGDGPFQVLERINNNAYKL
Subjt:  TPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKL

Query:  DLRGKYNAMKT
        DLRGKYN   T
Subjt:  DLRGKYNAMKT

A0A5D3DGA7 Transposon Ty3-I Gag-Pol polyprotein5.7e-27886.79Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+RELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDDATNIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNRAIHSTTHCSPFEVVYG N LTPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT
        R ERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYN   T
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKT

A0A5D3DRJ1 F15O4.137.7e-27586.99Show/hide
Query:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL
        +NAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGI AVLMQEKQPIMFFSEKLNG QLNY T DKELHALVRALKVWQHYLWPKEFVIHTDHESLK+L
Subjt:  KNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYL

Query:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI
        KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMV DALSR                                                     RKGKLCI
Subjt:  KGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------RKGKLCI

Query:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
        PKCS+RELLVKEAHGGGLMGHFGEFKTYS+LCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV
Subjt:  PKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPLDVPNEPWVDISMDFVLGLPKTRRHHDSIFV

Query:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
        V+DRFSKMAHFIPCNKTDDATNIANLFFREVVRLH IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS
Subjt:  VIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGALLRSLISKNLKS

Query:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL
        WEETLPFVEFAYNRAIHSTTHCSPFEVVYG N LTPLDLSPLPPNMFTSDAASSR EYIKTLHKEIKERIEKKNQKLVT KNQGRKELIFKP DWVWVHL
Subjt:  WEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIFKPRDWVWVHL

Query:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG
        R ERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG
Subjt:  RNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRG

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein9.1e-6329.82Show/hide
Query:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQ-----PIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWP--KEFVIHTDHE
        A   +K+ L+  P L   +F K   +E DAS + + AVL Q+       P+ ++S K++  QLNY   DKE+ A++++LK W+HYL    + F I TDH 
Subjt:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQ-----PIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWP--KEFVIHTDHE

Query:  SL--KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------
        +L  +        NKR A+W  F++ F + I+Y+ G  N + DALSR                                                     
Subjt:  SL--KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------

Query:  --------------RKGKLCIPK-CSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKT-QPHGLYTPLDVPNEPW
                       K ++ +P    +   ++K+ H  G + H G     +++   F W  +RK + +  + C  C+  KS+  +P+G   P+     PW
Subjt:  --------------RKGKLCIPK-CSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKT-QPHGLYTPLDVPNEPW

Query:  VDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDG
          +SMDF+  LP++   ++++FVV+DRFSKMA  +PC K+  A   A +F + V+     PK I++D D  F S  WK    K    + FS    PQTDG
Subjt:  VDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDG

Query:  QTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKL
        QTE  N+T+  LLR + S +  +W + +  V+ +YN AIHS T  +PFE+V    H     LSPL    F SD     ++    + + +KE +   N K+
Subjt:  QTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKL

Query:  VTCKNQGRKEL-IFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL
            +   +E+  F+P D V V      F   + +KL     GPF VL++   N Y+LDL
Subjt:  VTCKNQGRKEL-IFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL

P0CT41 Transposon Tf2-12 polyprotein9.1e-6329.82Show/hide
Query:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQ-----PIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWP--KEFVIHTDHE
        A   +K+ L+  P L   +F K   +E DAS + + AVL Q+       P+ ++S K++  QLNY   DKE+ A++++LK W+HYL    + F I TDH 
Subjt:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQ-----PIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWP--KEFVIHTDHE

Query:  SL--KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------
        +L  +        NKR A+W  F++ F + I+Y+ G  N + DALSR                                                     
Subjt:  SL--KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------

Query:  --------------RKGKLCIPK-CSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKT-QPHGLYTPLDVPNEPW
                       K ++ +P    +   ++K+ H  G + H G     +++   F W  +RK + +  + C  C+  KS+  +P+G   P+     PW
Subjt:  --------------RKGKLCIPK-CSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKT-QPHGLYTPLDVPNEPW

Query:  VDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDG
          +SMDF+  LP++   ++++FVV+DRFSKMA  +PC K+  A   A +F + V+     PK I++D D  F S  WK    K    + FS    PQTDG
Subjt:  VDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDG

Query:  QTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKL
        QTE  N+T+  LLR + S +  +W + +  V+ +YN AIHS T  +PFE+V    H     LSPL    F SD     ++    + + +KE +   N K+
Subjt:  QTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKL

Query:  VTCKNQGRKEL-IFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL
            +   +E+  F+P D V V      F   + +KL     GPF VL++   N Y+LDL
Subjt:  VTCKNQGRKEL-IFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein6.9e-7132.8Show/hide
Query:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVL--MQEKQPIM----FFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHES
        A  +LK  L  +P L   N   ++ +  DAS  GI AVL  +  K  ++    +FS+ L   Q NYP  + EL  +++AL  +++ L  K F + TDH S
Subjt:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVL--MQEKQPIM----FFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHES

Query:  LKYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR------------------RKGKLCIPKCS-----MREL------------------
        L  L+ + +  +R  +W++ + T+ + + Y  G  N+V DA+SR                  +      P CS     M+EL                  
Subjt:  LKYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR------------------RKGKLCIPKCS-----MREL------------------

Query:  ----------------------------------LVKEAHGGGLM-GHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKS-KTQPHGLYTPLDV
                                          +++  H   L  GHFG   T + +   +YW K++  + +  + C +C+  KS + + HGL  PL +
Subjt:  ----------------------------------LVKEAHGGGLM-GHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKS-KTQPHGLYTPLDV

Query:  PNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCH
            W+DISMDFV GLP T  + + I VV+DRFSK AHFI   KT DAT + +L FR +   H  P+TI SDRDV+  +  ++ L  +LG K   S+  H
Subjt:  PNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCH

Query:  PQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEK
        PQTDGQ+E   +TL  LLR+ +S N+++W   LP +EF YN     T   SPFE+  G    TP   S    N   S  A   A+++K L  + KE++E 
Subjt:  PQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEK

Query:  KNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL
           ++ T  NQ RK L+    D V VH R+  F      K+QQ   GPF+V+++IN+NAY+LDL
Subjt:  KNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL

Q99315 Transposon Ty3-G Gag-Pol polyprotein6.9e-7132.8Show/hide
Query:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVL--MQEKQPIM----FFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHES
        A ++LK+ L  +P L   N   ++ +  DAS  GI AVL  +  K  ++    +FS+ L   Q NYP  + EL  +++AL  +++ L  K F + TDH S
Subjt:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVL--MQEKQPIM----FFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHES

Query:  LKYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR------------------RKGKLCIPKCS-----MREL------------------
        L  L+ + +  +R  +W++ + T+ + + Y  G  N+V DA+SR                  +      P CS     M+EL                  
Subjt:  LKYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR------------------RKGKLCIPKCS-----MREL------------------

Query:  ----------------------------------LVKEAHGGGLM-GHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKS-KTQPHGLYTPLDV
                                          +++  H   L  GHFG   T + +   +YW K++  + +  + C +C+  KS + + HGL  PL +
Subjt:  ----------------------------------LVKEAHGGGLM-GHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKS-KTQPHGLYTPLDV

Query:  PNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCH
            W+DISMDFV GLP T  + + I VV+DRFSK AHFI   KT DAT + +L FR +   H  P+TI SDRDV+  +  ++ L  +LG K   S+  H
Subjt:  PNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCH

Query:  PQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEK
        PQTDGQ+E   +TL  LLR+  S N+++W   LP +EF YN     T   SPFE+  G    TP   S    N   S  A   A+++K L  + KE++E 
Subjt:  PQTDGQTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEK

Query:  KNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL
           ++ T  NQ RK L+    D V VH R+  F      K+QQ   GPF+V+++IN+NAY+LDL
Subjt:  KNQKLVTCKNQGRKELIFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL

Q9UR07 Transposon Tf2-11 polyprotein9.1e-6329.82Show/hide
Query:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQ-----PIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWP--KEFVIHTDHE
        A   +K+ L+  P L   +F K   +E DAS + + AVL Q+       P+ ++S K++  QLNY   DKE+ A++++LK W+HYL    + F I TDH 
Subjt:  AFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQ-----PIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWP--KEFVIHTDHE

Query:  SL--KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------
        +L  +        NKR A+W  F++ F + I+Y+ G  N + DALSR                                                     
Subjt:  SL--KYLKGQTKLNKRHAKWVEFIETFPYVIHYKKGKDNMVVDALSR-----------------------------------------------------

Query:  --------------RKGKLCIPK-CSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKT-QPHGLYTPLDVPNEPW
                       K ++ +P    +   ++K+ H  G + H G     +++   F W  +RK + +  + C  C+  KS+  +P+G   P+     PW
Subjt:  --------------RKGKLCIPK-CSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKT-QPHGLYTPLDVPNEPW

Query:  VDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDG
          +SMDF+  LP++   ++++FVV+DRFSKMA  +PC K+  A   A +F + V+     PK I++D D  F S  WK    K    + FS    PQTDG
Subjt:  VDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDG

Query:  QTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKL
        QTE  N+T+  LLR + S +  +W + +  V+ +YN AIHS T  +PFE+V    H     LSPL    F SD     ++    + + +KE +   N K+
Subjt:  QTEVVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKL

Query:  VTCKNQGRKEL-IFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL
            +   +E+  F+P D V V      F   + +KL     GPF VL++   N Y+LDL
Subjt:  VTCKNQGRKEL-IFKPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCAAAAAATGCATTCAATGAGCTTAAAGAAAAATTGATCAAAGCACCTTGTCTTGCTTTACCTAATTTTGATAAATCTTTTGAGATAGAATGTGATGCAAGTGG
GATAGGTATAGAGGCTGTTTTGATGCAAGAAAAGCAACCAATCATGTTCTTTAGTGAAAAACTAAATGGAGTTCAACTCAACTACCCGACCTGTGACAAGGAGCTACATG
CGCTTGTGAGGGCTTTGAAAGTTTGGCAACATTACTTATGGCCAAAAGAGTTTGTTATCCACACAGACCATGAAAGCTTGAAGTATCTCAAAGGTCAAACTAAACTTAAC
AAGAGGCATGCGAAATGGGTGGAATTCATTGAGACATTTCCTTATGTCATCCATTACAAAAAGGGTAAGGACAATATGGTGGTCGATGCATTATCAAGAAGGAAAGGAAA
GCTTTGTATTCCTAAGTGTTCCATGAGAGAATTACTTGTGAAGGAAGCTCATGGGGGAGGACTTATGGGACATTTTGGAGAATTTAAAACATATAGCATGTTGTGTGAAC
ACTTTTATTGGCTTAAAATGAGGAAAGATGTGAACAAAGTGTGCAAGCAATGTTTCAAGTGTAAGGAGGCTAAGTCTAAGACACAACCACATGGCCTTTACACACCATTA
GATGTTCCTAATGAACCATGGGTAGACATTAGCATGGATTTTGTTCTAGGATTACCAAAGACTAGAAGACATCATGATAGTATTTTTGTGGTGATTGATAGGTTTAGTAA
GATGGCTCATTTCATTCCATGTAACAAAACCGATGATGCTACCAACATAGCTAATCTCTTCTTTAGAGAAGTGGTTAGATTGCATGACATTCCCAAAACTATTGTTAGTG
ATAGGGATGTTAAATTTTTAAGTCATTTTTGGAAAGTTTTGTGGGGAAAATTGGGAACTAAGCTTCTATTTTCTACAACTTGTCACCCACAAACGGATGGGCAAACTGAG
GTGGTTAATAGAACTTTGGGGGCCTTGCTTAGATCACTAATTTCTAAAAATCTTAAGTCTTGGGAAGAGACCCTACCTTTTGTGGAGTTTGCATACAATAGGGCAATTCA
TAGCACAACTCATTGTTCACCTTTTGAGGTTGTGTATGGTATTAACCATTTGACTCCTTTAGATTTATCACCTTTGCCGCCTAATATGTTTACTAGTGATGCAGCTTCTT
CTAGGGCTGAATACATCAAAACTTTGCACAAAGAAATCAAAGAAAGGATTGAAAAGAAGAATCAAAAGCTAGTCACTTGCAAGAACCAAGGAAGAAAGGAATTGATTTTT
AAACCGAGAGATTGGGTTTGGGTTCATCTAAGAAATGAAAGGTTTCCGGATCAAAGGAAGTCAAAACTTCAACAACGAGGCGATGGCCCTTTTCAAGTGCTTGAACGGAT
CAATAACAATGCATACAAGTTAGATCTACGAGGTAAGTACAATGCAATGAAGACCTTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTCAAAAAATGCATTCAATGAGCTTAAAGAAAAATTGATCAAAGCACCTTGTCTTGCTTTACCTAATTTTGATAAATCTTTTGAGATAGAATGTGATGCAAGTGG
GATAGGTATAGAGGCTGTTTTGATGCAAGAAAAGCAACCAATCATGTTCTTTAGTGAAAAACTAAATGGAGTTCAACTCAACTACCCGACCTGTGACAAGGAGCTACATG
CGCTTGTGAGGGCTTTGAAAGTTTGGCAACATTACTTATGGCCAAAAGAGTTTGTTATCCACACAGACCATGAAAGCTTGAAGTATCTCAAAGGTCAAACTAAACTTAAC
AAGAGGCATGCGAAATGGGTGGAATTCATTGAGACATTTCCTTATGTCATCCATTACAAAAAGGGTAAGGACAATATGGTGGTCGATGCATTATCAAGAAGGAAAGGAAA
GCTTTGTATTCCTAAGTGTTCCATGAGAGAATTACTTGTGAAGGAAGCTCATGGGGGAGGACTTATGGGACATTTTGGAGAATTTAAAACATATAGCATGTTGTGTGAAC
ACTTTTATTGGCTTAAAATGAGGAAAGATGTGAACAAAGTGTGCAAGCAATGTTTCAAGTGTAAGGAGGCTAAGTCTAAGACACAACCACATGGCCTTTACACACCATTA
GATGTTCCTAATGAACCATGGGTAGACATTAGCATGGATTTTGTTCTAGGATTACCAAAGACTAGAAGACATCATGATAGTATTTTTGTGGTGATTGATAGGTTTAGTAA
GATGGCTCATTTCATTCCATGTAACAAAACCGATGATGCTACCAACATAGCTAATCTCTTCTTTAGAGAAGTGGTTAGATTGCATGACATTCCCAAAACTATTGTTAGTG
ATAGGGATGTTAAATTTTTAAGTCATTTTTGGAAAGTTTTGTGGGGAAAATTGGGAACTAAGCTTCTATTTTCTACAACTTGTCACCCACAAACGGATGGGCAAACTGAG
GTGGTTAATAGAACTTTGGGGGCCTTGCTTAGATCACTAATTTCTAAAAATCTTAAGTCTTGGGAAGAGACCCTACCTTTTGTGGAGTTTGCATACAATAGGGCAATTCA
TAGCACAACTCATTGTTCACCTTTTGAGGTTGTGTATGGTATTAACCATTTGACTCCTTTAGATTTATCACCTTTGCCGCCTAATATGTTTACTAGTGATGCAGCTTCTT
CTAGGGCTGAATACATCAAAACTTTGCACAAAGAAATCAAAGAAAGGATTGAAAAGAAGAATCAAAAGCTAGTCACTTGCAAGAACCAAGGAAGAAAGGAATTGATTTTT
AAACCGAGAGATTGGGTTTGGGTTCATCTAAGAAATGAAAGGTTTCCGGATCAAAGGAAGTCAAAACTTCAACAACGAGGCGATGGCCCTTTTCAAGTGCTTGAACGGAT
CAATAACAATGCATACAAGTTAGATCTACGAGGTAAGTACAATGCAATGAAGACCTTGATTTGA
Protein sequenceShow/hide protein sequence
MHSKNAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIEAVLMQEKQPIMFFSEKLNGVQLNYPTCDKELHALVRALKVWQHYLWPKEFVIHTDHESLKYLKGQTKLN
KRHAKWVEFIETFPYVIHYKKGKDNMVVDALSRRKGKLCIPKCSMRELLVKEAHGGGLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYTPL
DVPNEPWVDISMDFVLGLPKTRRHHDSIFVVIDRFSKMAHFIPCNKTDDATNIANLFFREVVRLHDIPKTIVSDRDVKFLSHFWKVLWGKLGTKLLFSTTCHPQTDGQTE
VVNRTLGALLRSLISKNLKSWEETLPFVEFAYNRAIHSTTHCSPFEVVYGINHLTPLDLSPLPPNMFTSDAASSRAEYIKTLHKEIKERIEKKNQKLVTCKNQGRKELIF
KPRDWVWVHLRNERFPDQRKSKLQQRGDGPFQVLERINNNAYKLDLRGKYNAMKTLI