| GenBank top hits | e value | %identity | Alignment |
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| KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-47 | 80.51 | Show/hide |
Query: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
+KDLG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFDS DVS +RT +DASKHLKKNK DS+SQPEYAKIIGSVMYLMNYTRP+IAY +SRLSRYTHNP
Subjt: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
Query: YRYHWNALHHLLKYLKGT
RYHW+AL HLL+YLKGT
Subjt: YRYHWNALHHLLKYLKGT
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| KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-52 | 77.61 | Show/hide |
Query: MELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRP
MEL+ DTK FLS HFE+KDLG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFD DVS +RT +DASKHL KNK DS+SQPEYAKIIGSVMYLMNYTRP
Subjt: MELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRP
Query: EIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
+IAY +SRLSRYTHNP RYHW+ L HLL+YLKGT
Subjt: EIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| KAA0056672.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.7e-47 | 79.66 | Show/hide |
Query: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
I+ LG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFDS DVS +RT +DASKHLKKNK DS+SQPEYAKIIGSVMYLMNYTRP+IAY +SRLSRYTHNP
Subjt: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
Query: YRYHWNALHHLLKYLKGT
RYHW+ LHHLL+YLKGT
Subjt: YRYHWNALHHLLKYLKGT
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| KAD6453934.1 hypothetical protein E3N88_08640 [Mikania micrantha] | 9.4e-48 | 63.09 | Show/hide |
Query: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
+YVDDML FG +M IN TK FLS FE+KDLG+AD+ILGVK ++ NG+SLCQ HY+E+MLKKFD +++ ++T YD S LKKN +S+SQ EYAKII
Subjt: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
Query: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGTKKI
GSVM+LMNYTRP+IAY +SRLSRYTHNP + HW+A+H L++YL+GT ++
Subjt: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGTKKI
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 7.4e-61 | 80.82 | Show/hide |
Query: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
+YVDDML FGTNMELI DTK FLS HFE+KDLG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFDS DVS +RT +DASKHLKKNK DS+SQPEYAKII
Subjt: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
Query: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
GSVMYLMNYTRP+IAY +SRLSRYTHNP RYHW+AL HLL+YLKGT
Subjt: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-47 | 80.51 | Show/hide |
Query: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
+KDLG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFDS DVS +RT +DASKHLKKNK DS+SQPEYAKIIGSVMYLMNYTRP+IAY +SRLSRYTHNP
Subjt: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
Query: YRYHWNALHHLLKYLKGT
RYHW+AL HLL+YLKGT
Subjt: YRYHWNALHHLLKYLKGT
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.0e-53 | 77.61 | Show/hide |
Query: MELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRP
MEL+ DTK FLS HFE+KDLG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFD DVS +RT +DASKHL KNK DS+SQPEYAKIIGSVMYLMNYTRP
Subjt: MELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRP
Query: EIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
+IAY +SRLSRYTHNP RYHW+ L HLL+YLKGT
Subjt: EIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| A0A5A7ULG5 Ty1-copia retrotransposon protein | 1.3e-47 | 79.66 | Show/hide |
Query: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
I+ LG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFDS DVS +RT +DASKHLKKNK DS+SQPEYAKIIGSVMYLMNYTRP+IAY +SRLSRYTHNP
Subjt: IKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNP
Query: YRYHWNALHHLLKYLKGT
RYHW+ LHHLL+YLKGT
Subjt: YRYHWNALHHLLKYLKGT
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 3.6e-61 | 80.82 | Show/hide |
Query: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
+YVDDML FGTNMELI DTK FLS HFE+KDLG+AD+ILGVK RKN+ LSLCQ HYVEK+LKKFDS DVS +RT +DASKHLKKNK DS+SQPEYAKII
Subjt: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
Query: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
GSVMYLMNYTRP+IAY +SRLSRYTHNP RYHW+AL HLL+YLKGT
Subjt: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| A0A5N6PGV2 Reverse transcriptase Ty1/copia-type domain-containing protein | 4.5e-48 | 63.09 | Show/hide |
Query: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
+YVDDML FG +M IN TK FLS FE+KDLG+AD+ILGVK ++ NG+SLCQ HY+E+MLKKFD +++ ++T YD S LKKN +S+SQ EYAKII
Subjt: IYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAKII
Query: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGTKKI
GSVM+LMNYTRP+IAY +SRLSRYTHNP + HW+A+H L++YL+GT ++
Subjt: GSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGTKKI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-12 | 29.03 | Show/hide |
Query: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAK
+ +YVDD++ +M +N+ K +L F + DL + +G++ E+ + L Q YV+K+L KF+ + +++ T + + + D
Subjt: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAK
Query: IIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT--KKILF
+IG +MY+M TRP++ ++ LSRY+ W L +L+YLKGT K++F
Subjt: IIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT--KKILF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.6e-19 | 36.48 | Show/hide |
Query: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVK--TRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNK---------
+ +YVDDML G + LI K LS F++KDLG A ILG+K + L L Q Y+E++L++F+ + + T + HLK +K
Subjt: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVK--TRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNK---------
Query: EDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
+ +M++ Y+ +GS+MY M TRP+IA+ + +SR+ NP + HW A+ +L+YL+GT
Subjt: EDSMSQPEYAKIIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.3e-12 | 29.73 | Show/hide |
Query: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAK
+ +YVDD+L G++ L+N LS F +KDLG LG++ + + +GL L Q Y E++L LD + T + + ++
Subjt: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQPEYAK
Query: IIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
I+G++ YL TRP+I+Y ++ + + H P ++ L +L+Y+KGT
Subjt: IIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-16 | 34.23 | Show/hide |
Query: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQP-EYA
M +YVDD+L G + L+++T LS F +KD + LG++ ++ GL L Q Y+ +L + + + + T S L ++ P EY
Subjt: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQP-EYA
Query: KIIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
I+GS+ YL +TRP+I+Y ++RLS++ H P H AL +L+YL GT
Subjt: KIIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-17 | 35.57 | Show/hide |
Query: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQP-EYA
M +YVDD+L G + L+ T LS F +K+ LG++ ++ GL L Q Y +L + + L + T S L + + P EY
Subjt: MFIYVDDMLNFGTNMELINDTKLFLSLHFEIKDLGKADIILGVKTRKNENGLSLCQFHYVEKMLKKFDSLDVSSIRTFYDASKHLKKNKEDSMSQP-EYA
Query: KIIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
I+GS+ YL +TRP+++Y ++RLS+Y H P HWNAL +L+YL GT
Subjt: KIIGSVMYLMNYTRPEIAYVISRLSRYTHNPYRYHWNALHHLLKYLKGT
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