CuGenDBv2

Gene ID	Cmc01g0015151
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:12548913..12551136
RNA-Seq Expression	Cmc01g0015151
Synteny	Cmc01g0015151
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0000502 - proteasome complex (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025848.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

KAA0031437.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

TYK28368.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

TYK28422.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ2 Reverse transcriptase

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5A7TSL0 Reverse transcriptase

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5A7UBS1 Reverse transcriptase

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5D3CQB5 Reverse transcriptase

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5D3DY07 Reverse transcriptase

0.0e+00

98.33

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELK+KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPL VPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

5.3e-104

32.02

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L +K   + W+P   ++ + +K+ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR

Query:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM
        D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +   ++ + H     +
Subjt:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM

Query:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT
        HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T
Subjt:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT
        A +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  + 
Subjt:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT

Query:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV
          M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F 
Subjt:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV

Query:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT35 Transposon Tf2-2 polyprotein

5.3e-104

32.02

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L +K   + W+P   ++ + +K+ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR

Query:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM
        D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +   ++ + H     +
Subjt:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM

Query:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT
        HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T
Subjt:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT
        A +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  + 
Subjt:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT

Query:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV
          M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F 
Subjt:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV

Query:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT36 Transposon Tf2-3 polyprotein

5.3e-104

32.02

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L +K   + W+P   ++ + +K+ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR

Query:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM
        D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +   ++ + H     +
Subjt:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM

Query:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT
        HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T
Subjt:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT
        A +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  + 
Subjt:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT

Query:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV
          M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F 
Subjt:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV

Query:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT37 Transposon Tf2-4 polyprotein

5.3e-104

32.02

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L +K   + W+P   ++ + +K+ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR

Query:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM
        D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +   ++ + H     +
Subjt:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM

Query:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT
        HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T
Subjt:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT
        A +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  + 
Subjt:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT

Query:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV
          M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F 
Subjt:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV

Query:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT41 Transposon Tf2-12 polyprotein

5.3e-104

32.02

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L +K   + W+P   ++ + +K+ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR

Query:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM
        D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +   ++ + H     +
Subjt:  DFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISFDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTM

Query:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT
        HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T
Subjt:  HPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT
        A +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  + 
Subjt:  ASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQAT

Query:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV
          M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F 
Subjt:  IGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFKVGDMVFLKVAPMKGVLRFAKKGKLSPRFV

Query:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  GPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.0e-25

43.2

Show/hide

Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACERSFQELKRKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKRKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTT
ACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGG
GAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTC
GTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGTCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACGGAA
GCTAGTGACGGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTTCTGATGCAGCAGGGTAAGG
TAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGACACTATCTG
TACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTA
CGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCA
GGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTG
AATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTTTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCC
GGAAGACAGCGCAGTTAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGT
GGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGGGTGTG
CCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGC
CCACTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAG
ACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTG
AACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTAC
TATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACGA
CCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTAAAGTGGGAGATATG
GTCTTTCTGAAGGTAGCGCCTATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTTGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGT
GGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRF
VEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKRKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYL
YGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL
NDPYLAEKRRVVETEQGEGFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLGV
PGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERL
NQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDM
VFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSHCRLARI

Cmc01g0015151 (gene) of Melon (Charmono) v1.1 genome