CuGenDBv2

Gene ID	Cmc01g0015411
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like
Genome location	CMiso1.1chr01:12982436..12982690
RNA-Seq Expression	Cmc01g0015411
Synteny	Cmc01g0015411
Gene Ontology terms	GO:0006431 - methionyl-tRNA aminoacylation (biological process) GO:0009089 - lysine biosynthetic process via diaminopimelate (biological process) GO:0009791 - post-embryonic development (biological process) GO:0019877 - diaminopimelate biosynthetic process (biological process) GO:0048608 - reproductive structure development (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0000049 - tRNA binding (molecular function) GO:0004825 - methionine-tRNA ligase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase (molecular function) GO:0070402 - NADPH binding (molecular function)
InterPro domains	IPR023940 - Dihydrodipicolinate reductase

Homology

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GenBank top hits

e value

%identity

Alignment

TYK23125.1 4-hydroxy-tetrahydrodipicolinate reductase 2 [Cucumis melo var. makuwa]

6.8e-31

98.65

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

XP_008447745.1 PREDICTED: 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like [Cucumis melo]

6.8e-31

98.65

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

XP_011658970.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Cucumis sativus]

1.5e-30

97.3

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MGQAVIKAADSAG+NVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

XP_038897258.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic isoform X1 [Benincasa hispida]

1.4e-28

93.24

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAG+NVVPVSFGSLEESG TIQASGKDILVHGP DRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

XP_038897260.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic isoform X2 [Benincasa hispida]

1.4e-28

93.24

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAG+NVVPVSFGSLEESG TIQASGKDILVHGP DRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8P0 Uncharacterized protein

7.3e-31

97.3

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MGQAVIKAADSAG+NVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

A0A1S3BI41 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like

3.3e-31

98.65

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

A0A5D3DHR7 4-hydroxy-tetrahydrodipicolinate reductase 2

3.3e-31

98.65

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

A0A6J1EVG5 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like

4.9e-27

89.19

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAG+NVVPVSFGSLEESG TIQASGKDILVHGP +R +VLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

A0A6J1I660 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like

4.9e-27

89.19

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAG+NVVPVSFGSLEESG TIQASGKDILVHGP +R +VLASVFDEYPNLIVVDYTVPSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

SwissProt top hits

e value

%identity

Alignment

O80574 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic

1.4e-23

68.92

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAGVN+VP+SFGS  E GQ ++  GK+I VHGP +RE VL+SVF+++P LIVVDYT+PSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

Q10P67 Probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic

1.7e-13

44.59

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG +V +A  S+G+++VP+SF S +   +T++    D+ ++GP  RE+VL+SV DE+P+++VVDYT P +VN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

Q67W29 Probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic

1.5e-12

45.95

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AV +AA SAG+ +VPVSF ++E     ++   ++I +  P + E++L S+  +YP++IVVDYTVP AVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

Q8LB01 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic

3.1e-26

74.32

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAGVN+VP SFGS+EE+GQT++  GK+ILVHGP +RE VL+SVF++YP LIVVDYT+PSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

Arabidopsis top hits

e value

%identity

Alignment

AT2G44040.1 Dihydrodipicolinate reductase, bacterial/plant

1.0e-24

68.92

Show/hide

Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAGVN+VP+SFGS  E GQ ++  GK+I VHGP +RE VL+SVF+++P LIVVDYT+PSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

AT3G59890.1 Dihydrodipicolinate reductase, bacterial/plant

2.2e-27

74.32

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAGVN+VP SFGS+EE+GQT++  GK+ILVHGP +RE VL+SVF++YP LIVVDYT+PSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

AT3G59890.2 Dihydrodipicolinate reductase, bacterial/plant

2.2e-27

74.32

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Query:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN
        MG+AVIKAADSAGVN+VP SFGS+EE+GQT++  GK+ILVHGP +RE VL+SVF++YP LIVVDYT+PSAVN N
Subjt:  MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGN

Sequences

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CDS sequence

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ATGGGACAGGCTGTTATCAAAGCTGCTGACTCTGCTGGCGTCAATGTTGTGCCAGTGTCATTTGGTTCCTTGGAGGAATCTGGACAAACTATACAAGCATCTGGA
AAGGATATTTTGGTTCATGGCCCTTTAGACAGGGAAAATGTACTTGCATCAGTTTTTGATGAATATCCAAATTTGATCGTGGTGGACTATACTGTGCCTTCTGCT
GTGAATGGTAATGACAATGCTTGA

mRNA sequence

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GTAAATGGATGCTCTGGAAAGATGGGACAGGCTGTTATCAAAGCTGCTGACTCTGCTGGCGTCAATGTTGTGCCAGTGTCATTTGGTTCCTTGGAGGAATCTGGA
CAAACTATACAAGCATCTGGAAAGGATATTTTGGTTCATGGCCCTTTAGACAGGGAAAATGTACTTGCATCAGTTTTTGATGAATATCCAAATTTGATCGTGGTG
GACTATACTGTGCCTTCTGCTGTGAATGGTAATGACAATGCTTGA

Protein sequence

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MGQAVIKAADSAGVNVVPVSFGSLEESGQTIQASGKDILVHGPLDRENVLASVFDEYPNLIVVDYTVPSAVNGNDNA

Cmc01g0015411 (gene) of Melon (Charmono) v1.1 genome