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Cmc01g0015421 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0015421
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like
Genome locationCMiso1.1chr01:12984222..12984651
RNA-Seq ExpressionCmc01g0015421
SyntenyCmc01g0015421
Gene Ontology termsGO:0006431 - methionyl-tRNA aminoacylation (biological process)
GO:0009089 - lysine biosynthetic process via diaminopimelate (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0019877 - diaminopimelate biosynthetic process (biological process)
GO:0048608 - reproductive structure development (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0004825 - methionine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase (molecular function)
GO:0070402 - NADPH binding (molecular function)
InterPro domainsIPR023940 - Dihydrodipicolinate reductase
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23125.1 4-hydroxy-tetrahydrodipicolinate reductase 2 [Cucumis melo var. makuwa]3.8e-3197.26Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

XP_008447745.1 PREDICTED: 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like [Cucumis melo]3.8e-3197.26Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

XP_011658970.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Cucumis sativus]3.8e-3197.26Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

XP_038897258.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic isoform X1 [Benincasa hispida]5.0e-3195.89Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVG+PFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

XP_038897260.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic isoform X2 [Benincasa hispida]5.0e-3195.89Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVG+PFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

TrEMBL top hitse value%identityAlignment
A0A0A0K8P0 Uncharacterized protein9.8e-3393.59Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEVTVNGT
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV  +GT
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEVTVNGT

A0A1S3BI41 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like1.9e-3197.26Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

A0A5D3DHR7 4-hydroxy-tetrahydrodipicolinate reductase 21.9e-3197.26Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

A0A6J1EVG5 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like4.1e-3195.89Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIM+EQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

A0A6J1I660 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like1.2e-3094.52Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V +NAELYCKVGVPFVMGTTGGDRDRLYKTVDDS+VYAVISPQMGKQVVAFLAAMEIM+EQFPGAFSGYSLEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

SwissProt top hitse value%identityAlignment
O80574 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic5.7e-3077.78Show/hide
Query:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  ++   V +NAELY KVGVPFVMGTTGGDR++LY+TV+++K+YAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSL+V
Subjt:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

Q10P67 Probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic5.4e-2883.56Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  NAELYCK+G+PFVMGTTGGDR  LYK+V DS  YA+ISPQMGKQVVAFLAAMEIMAEQFPGAFSGY LEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

Q67W29 Probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic1.8e-2883.56Show/hide
Query:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  NAELYCK+G+PFVMGTTGG+R  L+KTV+D+ VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGY LEV
Subjt:  VQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

Q8LB01 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic2.6e-3080.25Show/hide
Query:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  ++   V +NAELY KVGVPFVMGTTGGDR RLYKTV++SK+YAVISPQMGKQVVAFLAAMEIM+EQFPGAF+GYSLEV
Subjt:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

Arabidopsis top hitse value%identityAlignment
AT2G44040.1 Dihydrodipicolinate reductase, bacterial/plant4.1e-3177.78Show/hide
Query:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  ++   V +NAELY KVGVPFVMGTTGGDR++LY+TV+++K+YAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSL+V
Subjt:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

AT3G59890.1 Dihydrodipicolinate reductase, bacterial/plant1.8e-3180.25Show/hide
Query:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  ++   V +NAELY KVGVPFVMGTTGGDR RLYKTV++SK+YAVISPQMGKQVVAFLAAMEIM+EQFPGAF+GYSLEV
Subjt:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV

AT3G59890.2 Dihydrodipicolinate reductase, bacterial/plant1.8e-3180.25Show/hide
Query:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV
        V  ++   V +NAELY KVGVPFVMGTTGGDR RLYKTV++SK+YAVISPQMGKQVVAFLAAMEIM+EQFPGAF+GYSLEV
Subjt:  VQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAAGGAAAACACATTGCTTTGTCCAAACAAGCTTAGATTACCTTGTCCAGAATAATGCAGAGCTTTACTGCAAAGTTGGAGTTCCCTTTGTGATGGGAACAAC
CGGTGGAGATAGAGATCGGTTGTATAAAACGGTGGATGACTCAAAGGTTTATGCTGTAATCTCCCCACAAATGGGCAAGCAGGTCGTTGCCTTCCTTGCAGCTATGGAAA
TAATGGCTGAGCAGTTTCCTGGGGCCTTCTCTGGTTACTCTCTGGAGGTAACTGTCAATGGCACCATCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAAGGAAAACACATTGCTTTGTCCAAACAAGCTTAGATTACCTTGTCCAGAATAATGCAGAGCTTTACTGCAAAGTTGGAGTTCCCTTTGTGATGGGAACAAC
CGGTGGAGATAGAGATCGGTTGTATAAAACGGTGGATGACTCAAAGGTTTATGCTGTAATCTCCCCACAAATGGGCAAGCAGGTCGTTGCCTTCCTTGCAGCTATGGAAA
TAATGGCTGAGCAGTTTCCTGGGGCCTTCTCTGGTTACTCTCTGGAGGTAACTGTCAATGGCACCATCTCTTAA
Protein sequenceShow/hide protein sequence
MGKRKTHCFVQTSLDYLVQNNAELYCKVGVPFVMGTTGGDRDRLYKTVDDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLEVTVNGTIS