| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 1.8e-206 | 54.38 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+R GT TLYE+WKGRK +VK+FHIFGS CYILADRE +K D KS+ G+FLGYS N RAYRVFN+RT VME+INVVVDD +
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
K+ +E+ S + +A + E+++ E + N KR+ S+ +QK HP IIGDP+ G+ R ++ ++++++ C+ S IE
Subjt: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
Query: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
P +V EL QFKR VW LVP+ + N+IGTKWIFKNKT+E G + RNKARLVAQGY Q+EGVDFDETFAPVA+LE+IRLLL ++C
Subjt: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
Query: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
FKLYQMDVKSAFLNGYLNEEVY ++Y+L KALYGLKQAPRAWYE LT +L ++GY + DKTLF+ + + +L++AQIYVDDI+F
Subjt: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
Query: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
GG ++ +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ +YAKNIVK FG++ + +KRTP TH K+++D G +VD LYRSMIGSLLYLT
Subjt: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
Query: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
ASRPDI YAVG+CA RKSTSGGCF+LGNNL+SWFSKK+NC+SLSTAEA
Subjt: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
Query: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
EYI AG +QL+WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+L+++K+ITL+H Q+AD FTK LDA FE L
Subjt: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 3.1e-206 | 54.38 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+R GT TLYE+WKGRK +VK+FHIFGS CYILADRE +K D KS+ G+FLGYS N RAYRVFN+RT VME+INVVVDD +
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
K+ +E+ S + +A + E+++ E + N KR+ S+ +QK HP IIGDP+ G+ R ++ ++++++ C+ S IE
Subjt: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
Query: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
P +V EL QFKR VW LVP+ + N+IGTKWIFKNKT+E G + RNKARLVAQGY Q+EGVDFDETFAPVA+LE+IRLLL ++C
Subjt: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
Query: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
FKLYQMDVKSAFLNGYLNEEVY ++Y+L KALYGLKQAPRAWYE LT +L ++GY + DKTLF+ + + +L++AQIYVDDI+F
Subjt: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
Query: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
GG ++ +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ +YAKNIVK FG++ + +KRTP TH K+++D G +VD K YRSMIGSLLYLT
Subjt: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
Query: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
ASRPDI YAVG+CA RKSTSGGCF+LGNNL+SWFSKK+NC+SLSTAEA
Subjt: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
Query: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
EYI AG +QL+WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+L+++K+ITL+H Q+AD FTK LDA FE L
Subjt: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 8.1e-207 | 54.66 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+R GT TLYE+WKGRK VK+FHIFGS CYILADRE +K D KS+ G+FLGYS N RAYRVFN+RT VME+INVVVDD
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
K+ +E+ S + +A T+ E+++ E + N KR S +QK HP IIGDP+ G+ R ++ ++++++ C+ S IE
Subjt: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
Query: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
P +V EL QFKR VW LVP+ + N+IGTKWIFKNKT+E G + RNKARLVAQGY Q+EGVDFDETFAPVA+LE+IRLLL ++C
Subjt: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
Query: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
FKLYQMDVKSAFLNGYLNEE Y ++Y+L KALYGLKQAPRAWYE LT +L ++GY + DKTLF+ + + +L++AQIYVDDI+F
Subjt: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
Query: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
GG ++ +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ KYAKNIVK FG++ + +KRTP TH K+++D G +VD LYRSMIGSLLYLT
Subjt: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
Query: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
ASRPDI YAVG+CA RKSTSGGCF+LGNNL+SWFSKK+NC+SLSTAEA
Subjt: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
Query: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
EYI AG +QL+WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IREL+++K+ITL+H Q+AD FTK LDA FE L
Subjt: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| MCH79363.1 gag-pol polyprotein [Trifolium medium] | 3.1e-206 | 54.44 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+RSGT+ TLYELWKGRK VK+FH+FGS CYILADRE +K D KSE G+FLGYS N RAYRV N+RT+++ME+INVVVDD +
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEED-EASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAI
K D E D S++ + T P+ D E + +L+P ++K + S +QKNHP IIG P+ GI RR + + I++ C+ S I
Subjt: DKQIDDEED-EASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAI
Query: EPTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISC
EP +V EL QFKR VW LVP+ N+IGTKW+++NK+DE+G V RNKARLVAQGY+QVEG+DFDETFAPVA+LE+IRLL+ ++C
Subjt: EPTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISC
Query: FQNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDII
FKLYQMDVKSAFLNGYL+EEVY ++YKL KALYGLKQAPRAWYE LT++L +GY + DKTLF+ + +L++AQIYVDDI+
Subjt: FQNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDII
Query: FGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYL
FGG +V +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ KYAKNIVK FG++ + YKRTP TH K+T D G+ VD +Y+SMIGSLLYL
Subjt: FGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYL
Query: TASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAE
TASRPDI +AVG+CA RKSTSGGCFFLGNNL+SWFSKK+NC+SLSTAE
Subjt: TASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAE
Query: AEYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
AEYI AG +QL+WMK ML +Y + QDVMTL+CDN+SAI+ISKNP+QHSRTKHIDIRHHFIR+L+E ++TL+H + QLAD FTK LDA +E L
Subjt: AEYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| TYK23179.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.0e-238 | 88.93 | Show/hide |
Query: FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYN
FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTE+VMETINVVVDDYN
Subjt: FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYN
Query: NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSA
NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTE TNIELSP SISKRAT EGTLTILSSHV+KNHPLSSIIGDPSAGIIARRKDK
Subjt: NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSA
Query: IEPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSA
ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLL V S
Subjt: IEPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSA
Query: FLNGYLNEEVYYIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKL
F YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDT+KSEFEMSLVGKL
Subjt: FLNGYLNEEVYYIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKL
Query: SCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAVGICAR
SCFLGLQIKQRSE IFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAVGICAR
Subjt: SCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAVGICAR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A392LWM0 Gag-pol polyprotein (Fragment) | 1.5e-206 | 54.44 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+RSGT+ TLYELWKGRK VK+FH+FGS CYILADRE +K D KSE G+FLGYS N RAYRV N+RT+++ME+INVVVDD +
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEED-EASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAI
K D E D S++ + T P+ D E + +L+P ++K + S +QKNHP IIG P+ GI RR + + I++ C+ S I
Subjt: DKQIDDEED-EASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAI
Query: EPTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISC
EP +V EL QFKR VW LVP+ N+IGTKW+++NK+DE+G V RNKARLVAQGY+QVEG+DFDETFAPVA+LE+IRLL+ ++C
Subjt: EPTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISC
Query: FQNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDII
FKLYQMDVKSAFLNGYL+EEVY ++YKL KALYGLKQAPRAWYE LT++L +GY + DKTLF+ + +L++AQIYVDDI+
Subjt: FQNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDII
Query: FGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYL
FGG +V +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ KYAKNIVK FG++ + YKRTP TH K+T D G+ VD +Y+SMIGSLLYL
Subjt: FGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYL
Query: TASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAE
TASRPDI +AVG+CA RKSTSGGCFFLGNNL+SWFSKK+NC+SLSTAE
Subjt: TASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAE
Query: AEYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
AEYI AG +QL+WMK ML +Y + QDVMTL+CDN+SAI+ISKNP+QHSRTKHIDIRHHFIR+L+E ++TL+H + QLAD FTK LDA +E L
Subjt: AEYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| A0A5D3DIW3 Gag-pol polyprotein | 1.9e-238 | 88.93 | Show/hide |
Query: FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYN
FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTE+VMETINVVVDDYN
Subjt: FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYN
Query: NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSA
NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTE TNIELSP SISKRAT EGTLTILSSHV+KNHPLSSIIGDPSAGIIARRKDK
Subjt: NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSA
Query: IEPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSA
ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLL V S
Subjt: IEPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSA
Query: FLNGYLNEEVYYIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKL
F YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDT+KSEFEMSLVGKL
Subjt: FLNGYLNEEVYYIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKL
Query: SCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAVGICAR
SCFLGLQIKQRSE IFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAVGICAR
Subjt: SCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAVGICAR
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| Q84VH6 Gag-pol polyprotein | 3.9e-207 | 54.66 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+R GT TLYE+WKGRK VK+FHIFGS CYILADRE +K D KS+ G+FLGYS N RAYRVFN+RT VME+INVVVDD
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
K+ +E+ S + +A T+ E+++ E + N KR S +QK HP IIGDP+ G+ R ++ ++++++ C+ S IE
Subjt: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
Query: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
P +V EL QFKR VW LVP+ + N+IGTKWIFKNKT+E G + RNKARLVAQGY Q+EGVDFDETFAPVA+LE+IRLLL ++C
Subjt: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
Query: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
FKLYQMDVKSAFLNGYLNEE Y ++Y+L KALYGLKQAPRAWYE LT +L ++GY + DKTLF+ + + +L++AQIYVDDI+F
Subjt: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
Query: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
GG ++ +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ KYAKNIVK FG++ + +KRTP TH K+++D G +VD LYRSMIGSLLYLT
Subjt: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
Query: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
ASRPDI YAVG+CA RKSTSGGCF+LGNNL+SWFSKK+NC+SLSTAEA
Subjt: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
Query: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
EYI AG +QL+WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IREL+++K+ITL+H Q+AD FTK LDA FE L
Subjt: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| Q84VI2 Gag-pol polyprotein | 1.5e-206 | 54.38 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+R GT TLYE+WKGRK +VK+FHIFGS CYILADRE +K D KS+ G+FLGYS N RAYRVFN+RT VME+INVVVDD +
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
K+ +E+ S + +A + E+++ E + N KR+ S+ +QK HP IIGDP+ G+ R ++ ++++++ C+ S IE
Subjt: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
Query: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
P +V EL QFKR VW LVP+ + N+IGTKWIFKNKT+E G + RNKARLVAQGY Q+EGVDFDETFAPVA+LE+IRLLL ++C
Subjt: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
Query: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
FKLYQMDVKSAFLNGYLNEEVY ++Y+L KALYGLKQAPRAWYE LT +L ++GY + DKTLF+ + + +L++AQIYVDDI+F
Subjt: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
Query: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
GG ++ +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ +YAKNIVK FG++ + +KRTP TH K+++D G +VD K YRSMIGSLLYLT
Subjt: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
Query: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
ASRPDI YAVG+CA RKSTSGGCF+LGNNL+SWFSKK+NC+SLSTAEA
Subjt: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
Query: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
EYI AG +QL+WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+L+++K+ITL+H Q+AD FTK LDA FE L
Subjt: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| Q84VI4 Gag-pol polyprotein | 8.7e-207 | 54.38 | Show/hide |
Query: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
AEA+NT C+IHNR+T+R GT TLYE+WKGRK +VK+FHIFGS CYILADRE +K D KS+ G+FLGYS N RAYRVFN+RT VME+INVVVDD +
Subjt: AEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYNNN
Query: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
K+ +E+ S + +A + E+++ E + N KR+ S+ +QK HP IIGDP+ G+ R ++ ++++++ C+ S IE
Subjt: DKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQKNHPLSSIIGDPSAGIIARRKDKVDYLKMIADLCYTSAIE
Query: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
P +V EL QFKR VW LVP+ + N+IGTKWIFKNKT+E G + RNKARLVAQGY Q+EGVDFDETFAPVA+LE+IRLLL ++C
Subjt: PTSV---------------ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCF
Query: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
FKLYQMDVKSAFLNGYLNEEVY ++Y+L KALYGLKQAPRAWYE LT +L ++GY + DKTLF+ + + +L++AQIYVDDI+F
Subjt: QNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIF
Query: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
GG ++ +F+ M+SEFEMSLVG+L+ FLGLQ+KQ + IF+SQ +YAKNIVK FG++ + +KRTP TH K+++D G +VD LYRSMIGSLLYLT
Subjt: GGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLT
Query: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
ASRPDI YAVG+CA RKSTSGGCF+LGNNL+SWFSKK+NC+SLSTAEA
Subjt: ASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFSKKKNCISLSTAEA
Query: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
EYI AG +QL+WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+L+++K+ITL+H Q+AD FTK LDA FE L
Subjt: EYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.9e-70 | 32.92 | Show/hide |
Query: EPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSAF
E + EL K N WT+ + + NI+ ++W+F K +E G IR KARLVA+G+ Q +D++ETFAPVA++ + R +LS+ N K++QMDVK+AF
Subjt: EPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSAF
Query: LNGYLNEEVYY------------IYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFI--NRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDT
LNG L EE+Y + KLNKA+YGLKQA R W+E L E + D+ ++I I +YVDD++ T +NNF
Subjt: LNGYLNEEVYY------------IYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFI--NRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDT
Query: MKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVD-HKLYRSMIGSLLY-LTASRPDIAYAVGI
+ +F M+ + ++ F+G++I+ + + I++SQ Y K I+ F ++ TP +KI +++ D + RS+IG L+Y + +RPD+ AV I
Subjt: MKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVD-HKLYRSMIGSLLY-LTASRPDIAYAVGI
Query: CA-------------------------------------------------------RKSTSGGCFFLGN-NLVSWFSKKKNCISLSTAEAEYIVAGIEF
+ RKST+G F + + NL+ W +K++N ++ S+ EAEY+
Subjt: CA-------------------------------------------------------RKSTSGGCFFLGN-NLVSWFSKKKNCISLSTAEAEYIVAGIEF
Query: TQLIWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
+ +W+K +L I +++ + +Y DN I I+ NP H R KHIDI++HF RE ++N +I L++ P +QLAD FTKPL A F L
Subjt: TQLIWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEHL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-76 | 27.59 | Show/hide |
Query: FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYN
F EAV T C++ NR +W ++++ + +FG + +E K D KS +F+GY YR+++ + V+ + +VV +
Subjt: FLAEAVNTTCHIHNRITIRSGTNVTLYELWKGRKLNVKYFHIFGSTCYILADREYHQKWDAKSEHGLFLGYSQNRRAYRVFNNRTELVMETINVVVDDYN
Query: NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQK-----NHPLSS------IIGDPSAGIIARRKDKVDYL
++ + + E + I P + +P T+ E + + +S++ G + + + HP + + +RR +Y+
Subjt: NNDKQIDDEEDEASEETIAPTSTPIVVPKEDTEVTNIELSPNSISKRATAEGTLTILSSHVQK-----NHPLSS------IIGDPSAGIIARRKDKVDYL
Query: KMIADLCYTSAIEPTS------------VELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEA
+ D S E S E+ ++ + LV + KW+FK K D ++R KARLV +G+ Q +G+DFDE F+PV K+ +
Subjt: KMIADLCYTSAIEPTS------------VELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEA
Query: IRLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTS-THLI
IR +LS++ + ++ Q+DVK+AFL+G L EE+Y + KLNK+LYGLKQAPR WY ++ + Y + +D ++ R S + I
Subjt: IRLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVY--------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTS-THLI
Query: VAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQI--KQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHK
+ +YVDD++ G K L+ + F+M +G LG++I ++ S +++SQ+KY + +++ F + ++ TP H K+++ + V+ K
Subjt: VAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQI--KQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHK
Query: ------LYRSMIGSLLY-LTASRPDIAYAVGICA----------------------------------------------------RKSTSGGCFFLGNN
Y S +GSL+Y + +RPDIA+AVG+ + RKS++G F
Subjt: ------LYRSMIGSLLY-LTASRPDIAYAVGICA----------------------------------------------------RKSTSGGCFFLGNN
Query: LVSWFSKKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQL
+SW SK + C++LST EAEYI A ++IW+K L E G+ Q +YCD+ SAID+SKN + H+RTKHID+R+H+IRE+++++ + + N
Subjt: LVSWFSKKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQL
Query: ADTFTKPLDATMFE
AD TK + FE
Subjt: ADTFTKPLDATMFE
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.0e-19 | 30.04 | Show/hide |
Query: IYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDI-VGIAVDHKLYRS
+YVDDI+ G TL+N I + S F M +G + FLG+QIK +F+SQ KYA+ I+ N G+ + TP K+ + D +RS
Subjt: IYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDI-VGIAVDHKLYRS
Query: MIGSLLYLTASRPDIAYAVGI-----------------------------------------------------CARKSTSGGCFFLGNNLVSWFSKKKN
++G+L YLT +RPDI+YAV I R+ST+G C FLG N++SW +K++
Subjt: MIGSLLYLTASRPDIAYAVGI-----------------------------------------------------CARKSTSGGCFFLGNNLVSWFSKKKN
Query: CISLSTAEAEYIVAGIEFTQLIW
+S S+ E EY + +L W
Subjt: CISLSTAEAEYIVAGIEFTQLIW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-66 | 33.33 | Show/hide |
Query: NVWTLV-PKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVY--
+ W LV P I+G +WIF K + G + R KARLVA+GY Q G+D+ ETF+PV K +IR++L ++ +++ + Q+DV +AFL G L ++VY
Subjt: NVWTLV-PKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVY--
Query: ------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGK
Y+ KL KALYGLKQAPRAWY L YL G+ +D +LF+ + ++ +YVDDI+ G TL++N +D + F + +
Subjt: ------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGK
Query: LSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAV----------------
L FLG++ K+ + +SQ++Y +++ + ++ TP K++ D YR ++GSL YL +RPDI+YAV
Subjt: LSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAV----------------
Query: ---------------GICARK----------------------STSGGCFFLGNNLVSWFSKKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGI-I
GI +K ST+G +LG++ +SW SKK+ + S+ EAEY +++ W+ ++L E GI +
Subjt: ---------------GICARK----------------------STSGGCFFLGNNLVSWFSKKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGI-I
Query: QDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEH
+YCDN+ A + NPV HSR KHI I +HFIR +++ + + H + QLADT TKPL T F++
Subjt: QDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEH
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.0e-66 | 32.91 | Show/hide |
Query: NVWTLV-PKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVY--
+ W LV P I+G +WIF K + G + R KARLVA+GY Q G+D+ ETF+PV K +IR++L ++ +++ + Q+DV +AFL G L +EVY
Subjt: NVWTLV-PKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVY--
Query: ------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGK
Y+ +L KA+YGLKQAPRAWY L YL G+ +D +LF+ + +I +YVDDI+ G L+ + +D + F +
Subjt: ------------YIYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTHLIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGK
Query: LSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAV----------------
L FLG++ K+ + + +SQ++Y +++ + ++ TP T K+T D YR ++GSL YL +RPD++YAV
Subjt: LSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHKLYRSMIGSLLYLTASRPDIAYAV----------------
Query: ---------------GICARK----------------------STSGGCFFLGNNLVSWFSKKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGI-I
GI +K ST+G +LG++ +SW SKK+ + S+ EAEY ++L W+ ++L E GI +
Subjt: ---------------GICARK----------------------STSGGCFFLGNNLVSWFSKKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGI-I
Query: QDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEH
+YCDN+ A + NPV HSR KHI + +HFIR +++ + + H + QLADT TKPL F++
Subjt: QDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELIENKIITLQHFPANSQLADTFTKPLDATMFEH
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.1e-63 | 32.29 | Show/hide |
Query: IARRKDKVDYLKMIADLCYTSAIEPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAI
IA+ K+ Y + L + A++ E+ + + W + IG KW++K K + G + R KARLVA+GY Q EG+DF ETF+PV KL ++
Subjt: IARRKDKVDYLKMIADLCYTSAIEPTSVELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAI
Query: RLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVYY------------------IYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTH
+L+L+IS NF L+Q+D+ +AFLNG L+EE+Y + L K++YGLKQA R W+ ++ L G+ + +D T F+ T+T
Subjt: RLLLSISCFQNFKLYQMDVKSAFLNGYLNEEVYY------------------IYKLNKALYGLKQAPRAWYECLTMYLGEKGYSREETDKTLFINRTSTH
Query: LIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHK
+ +YVDDII V+ +KS F++ +G L FLGL+I + + I I Q+KYA +++ GL + P + G VD K
Subjt: LIVAQIYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDIVGIAVDHK
Query: LYRSMIGSLLYLTASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFS
YR +IG L+YL +R DI++AV + R+ST+G C FLG +L+SW S
Subjt: LYRSMIGSLLYLTASRPDIAYAVGICA-----------------------------------------------------RKSTSGGCFFLGNNLVSWFS
Query: KKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE
KK+ +S S+AEAEY +++W+ E + + L+CDN +AI I+ N V H RTKHI+ H +RE
Subjt: KKKNCISLSTAEAEYIVAGIEFTQLIWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.5e-20 | 30.04 | Show/hide |
Query: IYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDI-VGIAVDHKLYRS
+YVDDI+ G TL+N I + S F M +G + FLG+QIK +F+SQ KYA+ I+ N G+ + TP K+ + D +RS
Subjt: IYVDDIIFGGFPKTLVNNFIDTMKSEFEMSLVGKLSCFLGLQIKQRSECIFISQKKYAKNIVKNFGLDQSQYKRTPTTTHAKITEDI-VGIAVDHKLYRS
Query: MIGSLLYLTASRPDIAYAVGI-----------------------------------------------------CARKSTSGGCFFLGNNLVSWFSKKKN
++G+L YLT +RPDI+YAV I R+ST+G C FLG N++SW +K++
Subjt: MIGSLLYLTASRPDIAYAVGI-----------------------------------------------------CARKSTSGGCFFLGNNLVSWFSKKKN
Query: CISLSTAEAEYIVAGIEFTQLIW
+S S+ E EY + +L W
Subjt: CISLSTAEAEYIVAGIEFTQLIW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.0e-13 | 44.3 | Show/hide |
Query: ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSIS
EL R W LVP NI+G KW+FK K G + R KARLVA+G+ Q EG+ F ET++PV + IR +L+++
Subjt: ELLQFKRKNVWTLVPKLDEANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVAKLEAIRLLLSIS
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