CuGenDBv2

Gene ID	Cmc01g0016211
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:14310899..14313158
RNA-Seq Expression	Cmc01g0016211
Synteny	Cmc01g0016211
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0000502 - proteasome complex (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

KAA0062342.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.22

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Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

A0A5A7V2A0 Reverse transcriptase

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

A0A5D3BTN0 Reverse transcriptase

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

A0A5D3C6W3 Reverse transcriptase

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

A0A5D3DA59 Reverse transcriptase

0.0e+00

98.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAE+RRVVETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTV+WVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFAATQHTWWTS
        EILERIGPVAYRLALPPSFAA    +  S
Subjt:  EILERIGPVAYRLALPPSFAATQHTWWTS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.2e-106

32.31

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR

Query:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH
         L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H
Subjt:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH

P0CT35 Transposon Tf2-2 polyprotein

1.2e-106

32.31

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR

Query:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH
         L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H
Subjt:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH

P0CT36 Transposon Tf2-3 polyprotein

1.2e-106

32.31

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR

Query:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH
         L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H
Subjt:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH

P0CT37 Transposon Tf2-4 polyprotein

1.2e-106

32.31

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR

Query:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH
         L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H
Subjt:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH

P0CT41 Transposon Tf2-12 polyprotein

1.2e-106

32.31

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----ERRRVVETEQGEDFSISSDDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDR

Query:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH
         L   K  KL+P F GPF +L++ GP  Y L LP S    F++T H
Subjt:  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPS----FAATQH

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.0e-25

43.2

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACERSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATC
CTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTC
TGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACCCGACCGTCCACG
GTTAGTGAAATTCGAAGTTTTCTGGGCTTAGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGA
ACCCCTTTTGTCTGGAGTCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACGGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTT
GTAATCTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTTCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAAC
TACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGC
CTGAAGTACTTTTTCACACAGAAGGAGTTGAACATGAGACAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCA
AATGTAGTGGCTGATGCGCTGAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTC
TCAGTAGGTGAGGTGACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAGAAGATCATTGCTGCTCAGCTGAATGACCCTTACTTGGCAGAGAGG
CGTCGTGTGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAG
ACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAG
AGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGG
AAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGGTCTGGGTCGTGGTCGACAGACTCACGAAGTCGGCCCAC
TTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGA
GACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAAATTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAG
AGATTGAACCAGATTTTGGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGC
TACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCC
GAGTTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGCATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTC
GAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTAGCGCCTATGAAGGGTGTTCTGAGGTTCGCAAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTC
GAGATATTGGAGCGAATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCTTTTGCTGCAACCCAACACACGTGGTGGACTTCGAGCCACTGCAGATTAGCG
AGAATCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPST
VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQN
YPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV
SVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAERRRVVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK
RDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVVWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDR
DARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
ELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHTWWTSSHCRLA
RI

Cmc01g0016211 (gene) of Melon (Charmono) v1.1 genome