CuGenDBv2

Gene ID	Cmc01g0016511
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Genome location	CMiso1.1chr01:14704173..14713799
RNA-Seq Expression	Cmc01g0016511
Synteny	Cmc01g0016511
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

1.1e-101

96.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

1.8e-104

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

XP_008447828.1 PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]

2.5e-101

98.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

XP_016900442.1 PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]

3.2e-101

98.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRS+  LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

XP_022928127.1 uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]

6.1e-92

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQ+LQDP N+GSLSGMDGIV+ALL KQMESLQL FSSI KTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL +LC+MHRSEY LKES+VSALPELFWK RNH AQDLSSL QLLVDQPNI+KEEV+F+FDTILV EA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

5.4e-102

96.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEV+FVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

8.9e-105

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

A0A1S3BIY0 uncharacterized protein At5g43822 isoform X3

1.2e-101

98.5

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

1.6e-101

98.5

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRS+  LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

A0A6J1EJ12 uncharacterized protein At5g43822 isoform X3

3.0e-92

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQ+LQDP N+GSLSGMDGIV+ALL KQMESLQL FSSI KTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL +LC+MHRSEY LKES+VSALPELFWK RNH AQDLSSL QLLVDQPNI+KEEV+F+FDTILV EA
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

1.5e-40

46.23

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLE
        G QL +  S++   +++++R+G+KP + DCL GL +L +MH+SEY LK SI+S L  L  K       DL++L  L+VDQPNI K+EVQ +FD I   E
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

1.1e-41

46.23

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLE
        G QL +  S++   +++++R+G+KP + DCL GL +L +MH+SEY LK SI+S L  L  K       DL++L  L+VDQPNI K+EVQ +FD I   E
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAGAGATTCAGGAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCTTC
CTCCATCATTGGGAGGCTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGGGAAGCAGATGGAATCCTTGC
AACTTAGTTTCTCTTCCATTAAAAAAACAATGGAAGAACTTGGGAACGTTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTTAAAGGCGGTTCCAAT
CAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGTTTGAATGGGTTAATGGTTCTCTGCAACATGCACCGCTCTGAGTACAGTCT
TAAAGAATCTATCGTCTCAGCACTTCCGGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTA
AGAAAGAGGAAGTTCAATTCGTGTTTGATACTATACTGGTTCTAGAAGCCTAG

mRNA sequence

Show/hide mRNA sequence

CCTAAGCCCACATCATCTTTTATTTCTTTCACCTCCACTATTCTCTTGTGCAAAGCGGCAGCCACCAGTTCTCAAACTAACACCGGCGACCGTAACGACTCCGGTCAGCG
ACGACTAACGGCGCCTCTGAAGCCCAACTAACTGCGACGCAAGCTCCTTCATGCAGCGGCGATGCTCTATTCACGAACCACGACGCCCAAATCTACCTACGGCGGCTCGA
TTCCTCTGCTTTCTTCTCAGTAACGGCGGTGTTGTGACAGTCTAAATTTCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAGAGATTCAGGAAGTTCAAGGATGAAA
TGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCTTCCTCCATCATTGGGAGGCTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTG
TCTGGCATGGATGGCATTGTAGAGGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAAACAATGGAAGAACTTGGGAACGTTGTCAA
TTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTTAAAGGCGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAG
ATTGTTTGAATGGGTTAATGGTTCTCTGCAACATGCACCGCTCTGAGTACAGTCTTAAAGAATCTATCGTCTCAGCACTTCCGGAACTTTTCTGGAAAGCTAGGAATCAT
GGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTCAATTCGTGTTTGATACTATACTGGTTCTAGAAGCCTAGCT
AATGTATGATACTATCAAACAACTCAAGAACATATGATTTCATACACATGCTTTTATCACTGCATATCTCATATACTTCCAATATCAACTATTGGAAGAGTTGAACGAAC
CACGAAACCAACTAGAAGATAAAACTTCAAGGATATTCCACCGGGTGGTTATTCTTAATAATGATCATTGCTTAACAGATAAAAGCGCAACCAACCGCTCAAATGTAGAT
TCAATCTTCCATTTCTAAACTCAAAAAGGTAAAGAATTTGCCTTGCAAGTTCGATACATTATAACGATCTTAGTATAAAATAGGTAAAGTATTATCTATCACCCTTCACC
CCGTCTCCGCAACAATATCAATTTAATGTTCTTAGTAGTTTGTTGTTTTCTTTTGTGCCTTTTTGGTATTTGGAGGGTGTAGAATTATAAATGTGAAGCTTCTAGATATG
CATTCTTGAAATGGATGGATTGGATAGTCCCGTTGTAGAAAATTAAATATTACCATTTCATTATTTTTAATGCTCGGATTTGTCATTTGCATGGAATTTTGATTTGTAAA
CTATATACTTTCTTTATAACAATTTGTTATTTCTAAACTACCATCTTTCTCGTAAGGTATGTCCT

Protein sequence

Show/hide protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSN
QPSIKQLQQRVGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVQFVFDTILVLEA

Cmc01g0016511 (gene) of Melon (Charmono) v1.1 genome