; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0017191 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0017191
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr01:15141631..15143061
RNA-Seq ExpressionCmc01g0017191
SyntenyCmc01g0017191
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.0e-27498.1Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

TYK08113.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.9e-27497.89Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

TYK13816.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.0e-27498.1Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

TYK13925.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.9e-27497.89Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.9e-27497.89Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

TrEMBL top hitse value%identityAlignment
A0A5D3C639 Retrovirus-related Pol polyprotein from transposon TNT 1-949.7e-27598.1Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

A0A5D3C896 Retrovirus-related Pol polyprotein from transposon TNT 1-944.8e-27497.89Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

A0A5D3CQU3 Retrovirus-related Pol polyprotein from transposon TNT 1-944.8e-27497.89Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

A0A5D3CTU3 Retrovirus-related Pol polyprotein from transposon TNT 1-949.7e-27598.1Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

A0A5D3D497 Retrovirus-related Pol polyprotein from transposon TNT 1-944.8e-27497.89Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI
        MTKNRMFLLNIQTDV QCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESS RARRPLELVHTDLCGPI
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPI

Query:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI
        KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MT+PFTPQQNGVVERKNRTI
Subjt:  KPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTI

Query:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
        LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV
Subjt:  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPV

Query:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE
        TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDE DEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSE
Subjt:  TKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSE

Query:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYS++K
Subjt:  PLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.8e-6933.39Show/hide
Query:  MTKNRMFLLNIQTDVVQCLKSCLKDPN--WIWHLRFGHLNFDGLRLLARKNMVKG---LPYVKLPDQLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHT
        + KN   L N+     Q      K  N   +WH RFGH++   L  + RKNM      L  ++L  ++CE CL+GKQ+R  F Q +  +  +RPL +VH+
Subjt:  MTKNRMFLLNIQTDVVQCLKSCLKDPN--WIWHLRFGHLNFDGLRLLARKNMVKG---LPYVKLPDQLCEGCLHGKQSRKSFPQ-ESSSRARRPLELVHT

Query:  DLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVE
        D+CGPI P +    NYF++F+D F+     Y +K KS+VF MF+ F A  E      +  L  D G E+ SNE + FC + GI   +T+P TPQ NGV E
Subjt:  DLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVE

Query:  RKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSL--WNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSK
        R  RTI   AR+M+   K+ K FW +AV  A YL NR P+R+L   +KTP + W  +KP + HLRVFG   Y HI + K+ K DDKS K +FVGY+ +  
Subjt:  RKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSL--WNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSK

Query:  GYKLYNPVTKKTIVSRDVVFDE-------------------EASWNWN-----------------DEPEDYKFL---------------------FFPD-
        G+KL++ V +K IV+RDVV DE                   + S N N                  E ++ +FL                      FP+ 
Subjt:  GYKLYNPVTKKTIVSRDVVFDE-------------------EASWNWN-----------------DEPEDYKFL---------------------FFPD-

Query:  --ECD----------------------EPSDIASPPTSPITPQQSTSSSSAS-----SSEGPRGMRSLQDIYDETEELSQ----SFNN---------LTL
          ECD                      +  D  +       P +S  S +A        + P     ++ I   +E L      S+N          L  
Subjt:  --ECD----------------------EPSDIASPPTSPITPQQSTSSSSAS-----SSEGPRGMRSLQDIYDETEELSQ----SFNN---------LTL

Query:  FCLFGDSEPLNFEEASQND---KWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKK
          +F D  P +F+E    D    W+ A++ E+ A K N+TW ++  P  K  V  +WVF +K NE G   RYKARLVA+G+++K
Subjt:  FCLFGDSEPLNFEEASQND---KWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-9441.65Show/hide
Query:  IWHLRFGHLNFDGLRLLARKNMVKGLPYVK-LPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFV
        +WH R GH++  GL++LA+K+++    Y K    + C+ CL GKQ R SF Q SS R    L+LV++D+CGP++  S G N YF+ FIDD SRK WVY +
Subjt:  IWHLRFGHLNFDGLRLLARKNMVKGLPYVK-LPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFV

Query:  KEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVY
        K K +VF +F++F ALVE+E+G  +K LRSD GGE+TS EF+ +C+ +GIR   T+P TPQ NGV ER NRTI+   RSML+  K+PK FW +AV+ A Y
Subjt:  KEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVY

Query:  LSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY
        L NRSP+  L  + P++ WT ++ S  HL+VFGC A+AH+P ++R+KLDDKS   +F+GY     GY+L++PV KK I SRDVVF E       D  E  
Subjt:  LSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY

Query:  KFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDE-TEEL----------------------SQSFNNLTLFCLFGDSEPLNF
        K    P+    PS   +P     T  +ST+   +   E P  +    +  DE  EE+                      S+ + +     +  D EP + 
Subjt:  KFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDE-TEEL----------------------SQSFNNLTLFCLFGDSEPLNF

Query:  EEA---SQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        +E     + ++   AM EE+++++KN T++L  LP GK+ +  KWVFK+K++   ++ RYKARLV KG+ +KK
Subjt:  EEA---SQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

Q12113 Transposon Ty2-OR1 Gag-Pol polyprotein2.3e-2325.44Show/hide
Query:  KSCLKDPNWIWHLRFGHLNFDGLRLLARKNMV-----KGLPYVKLPDQLCEGCLHGKQSRKSFPQESS---SRARRPLELVHTDLCGPIKPSSFGKNNYF
        KS  K P  + H   GH NF  ++   +KN V       + +       C  CL GK ++    + S      +  P + +HTD+ GP+        +YF
Subjt:  KSCLKDPNWIWHLRFGHLNFDGLRLLARKNMV-----KGLPYVKLPDQLCEGCLHGKQSRKSFPQESS---SRARRPLELVHTDLCGPIKPSSFGKNNYF

Query:  LLFIDDFSRKTWVYFVKEKSE--VFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLK
        + F D+ +R  WVY + ++ E  + ++F    A ++ +    +  ++ DRG E+T+     F    GI    T     + +GV ER NRT+LN  R++L 
Subjt:  LLFIDDFSRKTWVYFVKEKSE--VFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLK

Query:  CKKMPKEFWAQAVECAVYLSNR--SPTRSLWNKTPQQAWTGRKPSIGHLRVFG--CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTI
        C  +P   W  AVE +  + N   SP     +K+ +Q        I  +  FG   +   H PD   SK+  +      +    +S GY +Y P  KKT+
Subjt:  CKKMPKEFWAQAVECAVYLSNR--SPTRSLWNKTPQQAWTGRKPSIGHLRVFG--CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTI

Query:  VSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPL
         + + V  +        +  DY  L F D+ +      +        Q  T  S   ++E     +S  +I   ++ L   F++ +L  L  D EP+
Subjt:  VSRDVVFDEEASWNWNDEPEDYKFLFFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.7e-4528.55Show/hide
Query:  WHLRFGHLNFDGLRLLARKNMVKGL-PYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDFSRKTWVYFV
        WH R GH     L  +     +  L P  K     C  CL  K ++  F Q S+  + RPLE +++D+   PI   S     Y+++F+D F+R TW+Y +
Subjt:  WHLRFGHLNFDGLRLLARKNMVKGL-PYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDFSRKTWVYFV

Query:  KEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVY
        K+KS+V + F  FK L+E      I    SD GGEF +     + +++GI    + P TP+ NG+ ERK+R I+    ++L    +PK +W  A   AVY
Subjt:  KEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVY

Query:  LSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-------------
        L NR PT  L  ++P Q   G  P+   LRVFGC  Y  +    + KLDDKS + VF+GY  +   Y   +  T +  +SR V FDE             
Subjt:  LSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-------------

Query:  -------EASWNWNDE---PEDYKFLFFPDECDEPSDIASPPTSPITP----------------------------------------------------
               E+S  W+     P     L  P  C +P   A+PP+SP  P                                                    
Subjt:  -------EASWNWNDE---PEDYKFLFFPDECDEPSDIASPPTSPITP----------------------------------------------------

Query:  -------------QQSTSSSSASSSEGPRGMRSLQD----------IYDETEELSQSFNN--------------------------LTLFCLFGDSEPLN
                      QS S+ + SSS  P    S             +      L+Q  NN                               L  +SEP  
Subjt:  -------------QQSTSSSSASSSEGPRGMRSLQD----------IYDETEELSQSFNN--------------------------LTLFCLFGDSEPLN

Query:  FEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKK
          +A ++++W+ AM  EI A   N TW+L    P+    VG +W+F  K N  G + RYKARLVAKGY+++
Subjt:  FEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.0e-4328.38Show/hide
Query:  CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDF
        C K  +  WH R GH     L +L        LP +    +L  C  C   K  +  F   S+  + +PLE +++D+   PI   S     Y+++F+D F
Subjt:  CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQL--CEGCLHGKQSRKSFPQESSSRARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDF

Query:  SRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFW
        +R TW+Y +K+KS+V D F  FK+LVE      I  L SD GGEF     + + +++GI    + P TP+ NG+ ERK+R I+ M  ++L    +PK +W
Subjt:  SRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFW

Query:  AQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE----
          A   AVYL NR PT  L  ++P Q   G+ P+   L+VFGC  Y  +    R KL+DKS++  F+GY  +   Y   +  T +   SR V FDE    
Subjt:  AQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE----

Query:  ----------------EASWNWNDE---PEDYKFLFFP-------DECDEP-------------------SDIASP----PTSP----------------
                        +++ NW      P     L  P       D    P                   S I+SP    PT+P                
Subjt:  ----------------EASWNWNDE---PEDYKFLFFP-------DECDEP-------------------SDIASP----PTSP----------------

Query:  -------------------------------------------ITPQQSTSSSSAS----------------SSEGPRGMRSLQD-IYDETEELSQSFNN
                                                   I+   S SSSS S                +++ P    S+     D   + +Q ++ 
Subjt:  -------------------------------------------ITPQQSTSSSSAS----------------SSEGPRGMRSLQD-IYDETEELSQSFNN

Query:  LTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKK
         T   L  +SEP    +A ++D+W+ AM  EI A   N TW+L    P     VG +W+F  K N  G + RYKARLVAKGY+++
Subjt:  LTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.3e-1746.94Show/hide
Query:  YDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        Y++   L  SF    L C+    EP  + EA +   W  AMD+EI A++   TWE+ TLP  KK +G KWV+KIK N  G +ERYKARLVAKGY++++
Subjt:  YDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK

ATMG00300.1 Gag-Pol-related retrotransposon family protein8.2e-0834.09Show/hide
Query:  LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCG-PIKPSSF
        L    KD   +WH R  H++  G+ LL +K  +       L  + CE C++GK  R +F        + PL+ VH+DL G P  P SF
Subjt:  LKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCG-PIKPSSF

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.3e-0936.47Show/hide
Query:  NRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEK
        NRTI+   RSML    +PK F A A   AV++ N+ P+ ++    P + W    P+  +LR FGC+AY H  + K      K E+
Subjt:  NRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.6e-0841.33Show/hide
Query:  EPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK
        EP +   A ++  W  AM EE+ A+ +N TW L   P  +  +G KWVFK K +  G ++R KARLVAKG+ +++
Subjt:  EPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGTTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTT
GAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAA
GGAAGAGTTTTCCACAAGAATCATCTTCGAGAGCAAGGAGACCACTGGAGTTAGTTCACACTGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTAT
TTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGACATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGA
AAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGCAGAAAATGGAATTCGTCGCCCTATGACAATTC
CATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAA
GCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAG
AGTATTTGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCT
ACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTA
TTTTTTCCCGACGAATGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCC
TCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAGTGAACCTTTGAATT
TTGAAGAAGCTTCGCAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAA
GCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTAAAAAAAAAAGACATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGTTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTT
GAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAA
GGAAGAGTTTTCCACAAGAATCATCTTCGAGAGCAAGGAGACCACTGGAGTTAGTTCACACTGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTAT
TTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGACATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGA
AAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGCAGAAAATGGAATTCGTCGCCCTATGACAATTC
CATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAA
GCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAG
AGTATTTGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCT
ACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTA
TTTTTTCCCGACGAATGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCC
TCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAGTGAACCTTTGAATT
TTGAAGAAGCTTCGCAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAA
GCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTAAAAAAAAAAGACATTG
A
Protein sequenceShow/hide protein sequence
MTKNRMFLLNIQTDVVQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSSRARRPLELVHTDLCGPIKPSSFGKNNY
FLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTIPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQ
AVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL
FFPDECDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKK
AVGVKWVFKIKRNEKGEVERYKARLVAKGYSKKKRH