| GenBank top hits | e value | %identity | Alignment |
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 5.8e-86 | 90.17 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFHSRYGHYEF+VMSF LTNAPAVFMDL+NR+FKDF+D FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFWL+KV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| KAA0063793.1 pol protein [Cucumis melo var. makuwa] | 2.2e-85 | 90.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SRYGHYEF+VMSF LTNAPAVFMDL+NR+FKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFWL+KV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| KAA0063946.1 pol protein [Cucumis melo var. makuwa] | 7.6e-86 | 91.33 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF SRYGHYEF+VMSF LTNAPAVFMDL+NR+FKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFWL+KV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| TYK04344.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.6e-86 | 91.91 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF SRYGHYEFIVMSF LTNAPAVFMDL+NR+FKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE +HE+HLHQVL TLRANKLY KFSKCEFWLKKV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| TYK28967.1 pol protein [Cucumis melo var. makuwa] | 1.7e-85 | 91.33 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF SRY HYEFI+MSF LTNAPAVFMDL+NR+FKDFLD F+
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTEVEHE+HLHQVL TLRANKLY KFSKCEFWLKKV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7USG7 Reverse transcriptase | 2.8e-86 | 90.17 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFHSRYGHYEF+VMSF LTNAPAVFMDL+NR+FKDF+D FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFWL+KV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| A0A5A7V6R2 Reverse transcriptase | 1.1e-85 | 90.75 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SRYGHYEF+VMSF LTNAPAVFMDL+NR+FKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFWL+KV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| A0A5A7VBY3 Reverse transcriptase | 3.7e-86 | 91.33 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF SRYGHYEF+VMSF LTNAPAVFMDL+NR+FKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFWL+KV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| A0A5D3BZD2 Reverse transcriptase | 3.7e-86 | 91.91 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF SRYGHYEFIVMSF LTNAPAVFMDL+NR+FKDFLD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTE +HE+HLHQVL TLRANKLY KFSKCEFWLKKV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| A0A5D3DYK2 Pol protein | 8.1e-86 | 91.33 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF SRY HYEFI+MSF LTNAPAVFMDL+NR+FKDFLD F+
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
IVFIDDIL+YSKTEVEHE+HLHQVL TLRANKLY KFSKCEFWLKKV FL HVVSSEGVSVDPAKIEAVT+WP
Subjt: IVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 5.3e-34 | 38.95 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + + KTAF +++GHYE++ M F L NAPA F +N + + L+K +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
Query: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
V++DDI+V+S + EH L V L L ++ KCEF ++ FL HV++ +G+ +P KIEA+ +P
Subjt: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.7e-35 | 38.37 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + + I KTAF ++ GHYE++ M F L NAPA F +N + + L+K +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
Query: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
V++DDI+++S + EH + + V L L ++ KCEF K+ FL H+V+ +G+ +P K++A+ S+P
Subjt: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| P31843 RNA-directed DNA polymerase homolog | 4.5e-33 | 55.12 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
+R+CIDYR L KVT+KN+YP+PR+DDLFD+L AT F+K+DLRSGY Q+RI D PKT +RYG +EF VM F LTNA A F +L+N + ++LD FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFV
Query: IVFIDDILV---YSKTEVEHEDHLHQV
+V++DD++V YS + EH HL V
Subjt: IVFIDDILV---YSKTEVEHEDHLHQV
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.9e-32 | 38.37 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +++SDIPKTAF + G YEF+ + F L NAPA+F +I+ + ++ + K
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
Query: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
V+IDDI+V+S+ H +L VL +L L V K F +V FL ++V+++G+ DP K+ A++ P
Subjt: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWP
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.5e-31 | 40.46 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D KTAF + G YE+ VM F L NAP+ F + F+D +FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFHSRYGHYEFIVMSFCLTNAPAVFMDLINRLFKDFLDKFVI
Query: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWPS
V++DDIL++S++ EH HL VL L+ L VK KC+F ++ FL + + + ++ K A+ +P+
Subjt: VFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYVKFSKCEFWLKKVYFLRHVVSSEGVSVDPAKIEAVTSWPS
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