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Cmc01g0017841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0017841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionprotein P200-like isoform X4
Genome locationCMiso1.1chr01:15751054..15751568
RNA-Seq ExpressionCmc01g0017841
SyntenyCmc01g0017841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045390.1 putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa]5.5e-1081.82Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIRIEEF
        +DFH+LSRRE Q+  KRNKIPANITNVAMAD LAARSS+RIEEF
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIRIEEF
KAA0055115.1 putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa]1.4e-1076Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
KAE8648245.1 hypothetical protein Csa_018446, partial [Cucumis sativus]1.4e-1076Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
XP_008467303.1 PREDICTED: probable beta-tubulin polyglutamylase [Cucumis melo]1.4e-1076Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
XP_031740824.1 midasin-like [Cucumis sativus]1.4e-1076Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
TrEMBL top hitse value%identityAlignment
A0A0A0KJF8 Uncharacterized protein7.0e-1176Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
A0A0A0KKZ3 Uncharacterized protein3.5e-1074Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDF++LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
A0A1S3CT90 probable beta-tubulin polyglutamylase7.0e-1176Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
A0A5A7TQF2 Putative beta-tubulin polyglutamylase2.7e-1081.82Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIRIEEF
        +DFH+LSRRE Q+  KRNKIPANITNVAMAD LAARSS+RIEEF
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIRIEEF
A0A5A7UN97 Putative beta-tubulin polyglutamylase7.0e-1176Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
        MDFH+LSRRE Q+ CKRNKIPANITNVAMAD LAA  S+  IEEFL GD+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIR-IEEFLCGDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76740.1 unknown protein4.3e-0548.57Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAA
        M+FH + R++ Q+ CK+N IPAN+ N+ MA  LA+
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAA
AT3G03130.1 unknown protein1.3e-0978.79Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTL
        MDFHSL RR+ Q FCKRNKIPAN+TN+AMAD L
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTL
AT5G17160.1 unknown protein8.4e-0975.76Show/hide
Query:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTL
        MDFHSL RR+ Q  CKRNKIPAN+TN+AMAD L
Subjt:  MDFHSLSRRETQSFCKRNKIPANITNVAMADTL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCCATAGCTTGTCAAGGAGAGAGACCCAATCCTTTTGTAAGAGGAATAAGATTCCGGCCAATATCACTAATGTCGCCATGGCCGACACTCTTGCTGCTCGATC
TTCAATCCGAATCGAGGAGTTTTTGTGCGGTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTTGTGGCACCGTCAAAATTTTGTTTGGATCGAAGAAATTTTCCCCATCCTGCCATGGCCGTGTGAAAATTTCTTCAATGCAAACGGAAATTTTATCTTCCTTTC
GCCATGGATTTCCATAGCTTGTCAAGGAGAGAGACCCAATCCTTTTGTAAGAGGAATAAGATTCCGGCCAATATCACTAATGTCGCCATGGCCGACACTCTTGCTGCTCG
ATCTTCAATCCGAATCGAGGAGTTTTTGTGCGGTGATAAATGAGCACCCAAAACGGCAATTGATTCTGTAGTTTAATCTTGTGATTTTGGTGATTTTGAAGCGTATAACA
TAATTCTACTGTGTTAAGAAGTAAATAAGATTTTTCTAGGGTTTTTGAAAGTTAATTTTAGATATTTCCTTATTCGATCTTG
Protein sequenceShow/hide protein sequence
MDFHSLSRRETQSFCKRNKIPANITNVAMADTLAARSSIRIEEFLCGDK