; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0018751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0018751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr01:16393321..16395096
RNA-Seq ExpressionCmc01g0018751
SyntenyCmc01g0018751
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035938.1 pol protein [Cucumis melo var. makuwa]3.4e-29195.64Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFV------ENFSRCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
        LGLAGYYRRFV      +    CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
Subjt:  LGLAGYYRRFV------ENFSRCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLS
        VKDYDCEILYHPGKANVV DALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQ AEFSLS
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLS

Query:  SDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFI
        SDGGLLFE RLCVPSDSA+KTELL+EAHSSPFSMHPGSTKMYQDLKRVYWWR MKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFI
Subjt:  SDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFI

Query:  TGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQV
        TGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGL TAMGTRLDFSTAFHPQTDGQ ERLNQV
Subjt:  TGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQV

Query:  LEDMLRACALEFPGSWDSHLHLMEFAYN
        LEDMLRACALEFPGSWD+HLHLMEFAYN
Subjt:  LEDMLRACALEFPGSWDSHLHLMEFAYN

KAA0040695.1 pol protein [Cucumis melo var. makuwa]1.8e-28787.61Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYR+FVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWW  MKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTK AHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVS+RDARFTSKFWKGL TAMGTRLDFSTAFHPQTDGQ ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

KAA0048687.1 pol protein [Cucumis melo var. makuwa]6.1e-28887.61Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQA EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWR MKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVSDRDARFTSKFWK L TAMGTRLDFSTAFHPQTDGQ ERLNQVLE MLRACALEFPGSWDSHLHLMEF YN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

KAA0051357.1 pol protein [Cucumis melo var. makuwa]1.8e-28787.78Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQA EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWR MKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVSDRDARFTSKFWKGL TAMGTRLDFSTAFHPQ DGQ ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

KAA0057672.1 pol protein [Cucumis melo var. makuwa]8.5e-29087.95Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQA EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        +YWWR MKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVSDRDARFTSKFWKGL TAMGTRLDFSTAFHPQTDGQ ERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

TrEMBL top hitse value%identityAlignment
A0A5A7SZD6 Pol protein1.7e-29195.64Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFV------ENFSRCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
        LGLAGYYRRFV      +    CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
Subjt:  LGLAGYYRRFV------ENFSRCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLS
        VKDYDCEILYHPGKANVV DALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQ AEFSLS
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLS

Query:  SDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFI
        SDGGLLFE RLCVPSDSA+KTELL+EAHSSPFSMHPGSTKMYQDLKRVYWWR MKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFI
Subjt:  SDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFI

Query:  TGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQV
        TGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGL TAMGTRLDFSTAFHPQTDGQ ERLNQV
Subjt:  TGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQV

Query:  LEDMLRACALEFPGSWDSHLHLMEFAYN
        LEDMLRACALEFPGSWD+HLHLMEFAYN
Subjt:  LEDMLRACALEFPGSWDSHLHLMEFAYN

A0A5A7TGX4 Reverse transcriptase8.6e-28887.61Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYR+FVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWW  MKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTK AHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVS+RDARFTSKFWKGL TAMGTRLDFSTAFHPQTDGQ ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

A0A5A7U330 Reverse transcriptase2.9e-28887.61Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQA EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWR MKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVSDRDARFTSKFWK L TAMGTRLDFSTAFHPQTDGQ ERLNQVLE MLRACALEFPGSWDSHLHLMEF YN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

A0A5A7UAA8 Reverse transcriptase8.6e-28887.78Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQA EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        VYWWR MKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVSDRDARFTSKFWKGL TAMGTRLDFSTAFHPQ DGQ ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

A0A5A7UP94 Pol protein4.1e-29087.95Show/hide
Query:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
        MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF
Subjt:  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSF

Query:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP
        LGLAGYYRRFVENFSR                                                           CVLMQQGKVVAYASRQLKSHEQNYP
Subjt:  LGLAGYYRRFVENFSR-----------------------------------------------------------CVLMQQGKVVAYASRQLKSHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
        THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE

Query:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR
        IAVSVGAVTMQLAQLTVQPTLRQRII+AQSNDPYLVEKRGLAEAGQA EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR
Subjt:  IAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR

Query:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV
        +YWWR MKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV
Subjt:  VYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        RLHGVPVSIVSDRDARFTSKFWKGL TAMGTRLDFSTAFHPQTDGQ ERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYN
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.4e-7229.37Show/hide
Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN
          Y R+F                              +EN  +C++                      +  G V            V Y S ++   + N
Subjt:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++ MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ ER NQ +E +LR      P +W  H+ L++ +YN
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

P0CT35 Transposon Tf2-2 polyprotein1.4e-7229.37Show/hide
Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN
          Y R+F                              +EN  +C++                      +  G V            V Y S ++   + N
Subjt:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++ MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ ER NQ +E +LR      P +W  H+ L++ +YN
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

P0CT36 Transposon Tf2-3 polyprotein1.4e-7229.37Show/hide
Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN
          Y R+F                              +EN  +C++                      +  G V            V Y S ++   + N
Subjt:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++ MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ ER NQ +E +LR      P +W  H+ L++ +YN
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

P0CT37 Transposon Tf2-4 polyprotein1.4e-7229.37Show/hide
Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN
          Y R+F                              +EN  +C++                      +  G V            V Y S ++   + N
Subjt:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++ MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ ER NQ +E +LR      P +W  H+ L++ +YN
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

P0CT41 Transposon Tf2-12 polyprotein1.4e-7229.37Show/hide
Query:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL
        +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL

Query:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN
          Y R+F                              +EN  +C++                      +  G V            V Y S ++   + N
Subjt:  AGYYRRF------------------------------VENFSRCVL----------------------MQQGKV------------VAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR

Query:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST
        D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG  
Subjt:  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGST

Query:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA
         +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++ MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Subjt:  KMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA

Query:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
        +++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ ER NQ +E +LR      P +W  H+ L++ +YN
Subjt:  QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein8.0e-2043.9Show/hide
Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRCVLMQQGKVVAYASRQL
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+        GK+V   +  L
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRCVLMQQGKVVAYASRQL

Query:  KSHEQNYPTHDLELAAVVF-ALK
        K +   +     E+AA+ F ALK
Subjt:  KSHEQNYPTHDLELAAVVF-ALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTT
ACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTG
GAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTT
GTGGAGAACTTTTCTCGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTT
GGCAGCCGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAAT
TGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAAATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTG
TCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTTACTATGCAGTTAGCCCAGTTGAC
GGTACAGCCGACTTTGAGGCAAAGGATCATCAATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGCTGAGTTCTCGTTAT
CCTCTGACGGTGGACTATTGTTTGAAAGACGTCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCA
GGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTATTATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGC
ACCAAGACAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTTCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGAT
TTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATA
GTGAGATTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCATACTGCTATGGGCACGAGATTGGACTTTAG
TACGGCTTTCCATCCACAGACTGACGGTCAGATTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACT
TACATTTGATGGAATTTGCTTATAATAAGTTATCAGGCTACTATTGGCATGGCACCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTT
ACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTG
GAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTT
GTGGAGAACTTTTCTCGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTT
GGCAGCCGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAAT
TGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAAATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTG
TCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTTACTATGCAGTTAGCCCAGTTGAC
GGTACAGCCGACTTTGAGGCAAAGGATCATCAATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGCTGAGTTCTCGTTAT
CCTCTGACGGTGGACTATTGTTTGAAAGACGTCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCA
GGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTATTATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGC
ACCAAGACAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTTCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGAT
TTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATA
GTGAGATTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCATACTGCTATGGGCACGAGATTGGACTTTAG
TACGGCTTTCCATCCACAGACTGACGGTCAGATTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACT
TACATTTGATGGAATTTGCTTATAATAAGTTATCAGGCTACTATTGGCATGGCACCGTTTGA
Protein sequenceShow/hide protein sequence
MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRF
VENFSRCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIINAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP
GSTKMYQDLKRVYWWRIMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEI
VRLHGVPVSIVSDRDARFTSKFWKGLHTAMGTRLDFSTAFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNKLSGYYWHGTV