; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0019021 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0019021
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionubiquitin fusion degradation protein 1 homolog isoform X1
Genome locationCMiso1.1chr01:16688299..16689882
RNA-Seq ExpressionCmc01g0019021
SyntenyCmc01g0019021
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
InterPro domainsIPR004854 - Ubiquitin fusion degradation protein Ufd1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06533.1 ubiquitin fusion degradation protein 1-like protein isoform X3 [Cucumis melo var. makuwa]1.7e-97100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

XP_008448043.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X6 [Cucumis melo]1.7e-97100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

XP_008448046.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X3 [Cucumis melo]1.7e-97100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

XP_016900499.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo]1.7e-97100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

XP_016900502.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X5 [Cucumis melo]1.7e-97100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

TrEMBL top hitse value%identityAlignment
A0A1S3BJE8 ubiquitin fusion degradation protein 1 homolog isoform X68.1e-98100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

A0A1S3BJQ5 ubiquitin fusion degradation protein 1 homolog isoform X38.1e-98100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

A0A1S4DWZ2 ubiquitin fusion degradation protein 1 homolog isoform X18.1e-98100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

A0A1S4DWZ4 ubiquitin fusion degradation protein 1 homolog isoform X58.1e-98100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

A0A5D3C3N7 Ubiquitin fusion degradation protein 1-like protein isoform X38.1e-98100Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG

SwissProt top hitse value%identityAlignment
P70362 Ubiquitin recognition factor in ER-associated degradation protein 12.6e-2150Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LE  LRNF+CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YKEPE+PV   +  E  A+      E  F AF+G+G RLDGK   
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQ
         +P P S  + GD K+
Subjt:  HQPQPISSSRSGDAKQ

Q55BK0 Ubiquitin fusion degradation protein 1 homolog2.1e-1833.64Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKP---------VAPTKG-------------------KEQV
        LE +LR F+ LT  D IM+ YNN KYY+ +VE KP+NAISIIE D  VDFAPP+D KE   P           P+KG                   K++ 
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKP---------VAPTKG-------------------KEQV

Query:  AEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAE
            D++ EPKF AF GTG RLDGK                       +  G S ++  +++ N             N N N        +  S  +  +
Subjt:  AEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAE

Query:  KEDPKFQPFTGKRYSLR
         ED KF+ F+GK +SL+
Subjt:  KEDPKFQPFTGKRYSLR

Q92890 Ubiquitin recognition factor in ER-associated degradation protein 17.2e-1937.57Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LE  LRNF+CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YKEPE+ V   +  E  A+      E  F AF+G+G RLDGK   
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLR
         +P P S  + GD K+                  +       GK+ F +N+        +   K+ ++DEA     +F  F+G+  SLR
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLR

Q9ES53 Ubiquitin recognition factor in ER-associated degradation protein 11.9e-1937.57Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LE  LRNF+CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YKEPE+PV   +  E  A+      E  F AF+G+G RLDGK   
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLR
         +P P S  + GD K+                  +       GK+ F +N+               KK E ++   +F  F+G+  SLR
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLR

Q9VTF9 Ubiquitin fusion degradation protein 1 homolog6.3e-1543.81Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKE--------QVAEAPDAEAEPKFSAFTGTGR
        LE  LRNF+CLT GD I + YN K Y + ++ETKP NA+SIIE D  V+F  P+ YK+  +  A   G++        ++A A +A  E     F G+G 
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKE--------QVAEAPDAEAEPKFSAFTGTGR

Query:  RLDGK
        RLDGK
Subjt:  RLDGK

Arabidopsis top hitse value%identityAlignment
AT2G21270.1 ubiquitin fusion degradation 15.1e-5262.05Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPT--KGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS
        LET LRN+SCLT+GDSIMV YNNKKY+IDIVETKP+NAISIIETDCEVDFAPPLDYKEPE+P AP+  KG  +  E  D E EPKF+ FTG+GRRLDG+ 
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPT--KGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS

Query:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKE-TPK-ETSKESKKDEAEKED-PKFQPFTGKRYSLRG
          ++P P SSS+        G        QS+ +SS   A ++QGKLVFG N NR PKE  PK   +KE+KK+E EK+D PKFQ F+GK+YSLRG
Subjt:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKE-TPK-ETSKESKKDEAEKED-PKFQPFTGKRYSLRG

AT2G21270.2 ubiquitin fusion degradation 15.1e-5262.05Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPT--KGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS
        LET LRN+SCLT+GDSIMV YNNKKY+IDIVETKP+NAISIIETDCEVDFAPPLDYKEPE+P AP+  KG  +  E  D E EPKF+ FTG+GRRLDG+ 
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPT--KGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS

Query:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKE-TPK-ETSKESKKDEAEKED-PKFQPFTGKRYSLRG
          ++P P SSS+        G        QS+ +SS   A ++QGKLVFG N NR PKE  PK   +KE+KK+E EK+D PKFQ F+GK+YSLRG
Subjt:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKE-TPK-ETSKESKKDEAEKED-PKFQPFTGKRYSLRG

AT2G21270.3 ubiquitin fusion degradation 15.1e-5262.05Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPT--KGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS
        LET LRN+SCLT+GDSIMV YNNKKY+IDIVETKP+NAISIIETDCEVDFAPPLDYKEPE+P AP+  KG  +  E  D E EPKF+ FTG+GRRLDG+ 
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPT--KGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS

Query:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKE-TPK-ETSKESKKDEAEKED-PKFQPFTGKRYSLRG
          ++P P SSS+        G        QS+ +SS   A ++QGKLVFG N NR PKE  PK   +KE+KK+E EK+D PKFQ F+GK+YSLRG
Subjt:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKE-TPK-ETSKESKKDEAEKED-PKFQPFTGKRYSLRG

AT4G38930.1 Ubiquitin fusion degradation UFD1 family protein6.2e-5057.07Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
        LET LRN+SCLT GDSIMV YNNKKY+IDIVE KPSN ISIIETDCEVDFAPPLDYKEPE+PVAP   K +  E   AEAEPKF+ FTG+GRRLDG+  +
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN

Query:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPK-ETSKESKKDEAEKEDPKFQPFTGKRYSLRG
        ++PQP +++ +G +  +           S+ S S     Q++GKLVFG N  R+ KET K    K+ K++E  +++ KFQ F+GK+YSLRG
Subjt:  HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPK-ETSKESKKDEAEKEDPKFQPFTGKRYSLRG

AT4G38930.2 Ubiquitin fusion degradation UFD1 family protein9.6e-5156.99Show/hide
Query:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPV--APTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS
        LET LRN+SCLT GDSIMV YNNKKY+IDIVE KPSN ISIIETDCEVDFAPPLDYKEPE+PV  AP KG+ +  E   AEAEPKF+ FTG+GRRLDG+ 
Subjt:  LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPV--APTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKS

Query:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPK-ETSKESKKDEAEKEDPKFQPFTGKRYSLRG
         +++PQP +++ +G +  +           S+ S S     Q++GKLVFG N  R+ KET K    K+ K++E  +++ KFQ F+GK+YSLRG
Subjt:  SNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPK-ETSKESKKDEAEKEDPKFQPFTGKRYSLRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAGTATTTATCTTTGTCATACAGCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCCTATAACAACAAGAAATATTA
CATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTTGATTTTGCACCTCCCCTGGATTACAAAGAACCGGAGAAGCCTGTTG
CACCAACAAAAGGGAAGGAACAAGTTGCAGAAGCTCCAGATGCCGAAGCTGAACCCAAATTTAGTGCATTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAAT
CACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGGTGATGCGAAGCAATTGGGTGGTAGAAGTAGATATGGCCATTCTCAACAGTCTGCTGGATCTAGCTCTGTGAACGG
AGCTCATCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCCAATCGGAATCCTAAAGAGACTCCAAAGGAGACTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGG
AAGATCCCAAATTCCAACCTTTTACTGGGAAAAGGTACTCATTGAGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAGTATTTATCTTTGTCATACAGCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCCTATAACAACAAGAAATATTA
CATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTTGATTTTGCACCTCCCCTGGATTACAAAGAACCGGAGAAGCCTGTTG
CACCAACAAAAGGGAAGGAACAAGTTGCAGAAGCTCCAGATGCCGAAGCTGAACCCAAATTTAGTGCATTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAAT
CACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGGTGATGCGAAGCAATTGGGTGGTAGAAGTAGATATGGCCATTCTCAACAGTCTGCTGGATCTAGCTCTGTGAACGG
AGCTCATCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCCAATCGGAATCCTAAAGAGACTCCAAAGGAGACTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGG
AAGATCCCAAATTCCAACCTTTTACTGGGAAAAGGTACTCATTGAGAGGTTGATTGTTTATCTAACATTTACTTCAGTGGATATA
Protein sequenceShow/hide protein sequence
MSEYLSLSYSLETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSN
HQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG