| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO45752.1 pol protein [Cucumis melo subsp. melo] | 6.5e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYG+ CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| KAA0035938.1 pol protein [Cucumis melo var. makuwa] | 6.5e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWD+HLHLMEFAYNN +QATIGMAPFEALYGK CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| KAA0043401.1 pol protein [Cucumis melo var. makuwa] | 6.5e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYG+ CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| KAA0056300.1 pol protein [Cucumis melo var. makuwa] | 6.5e-100 | 78.48 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFVS-------------------------
MKREVAEFVS+CLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHFV
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFVS-------------------------
Query: -----DRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
DRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DML ACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYGK CRSPVC
Subjt: -----DRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| KAA0066456.1 pol protein [Cucumis melo var. makuwa] | 6.5e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYG+ CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZD6 Pol protein | 3.1e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWD+HLHLMEFAYNN +QATIGMAPFEALYGK CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| A0A5A7TPA9 Pol protein | 3.1e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYG+ CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| A0A5A7U7V9 Reverse transcriptase | 3.1e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYG+ CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| A0A5A7UMD7 Pol protein | 3.1e-100 | 78.48 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFVS-------------------------
MKREVAEFVS+CLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHFV
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFVS-------------------------
Query: -----DRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
DRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DML ACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYGK CRSPVC
Subjt: -----DRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| A0A5A7VJE2 Reverse transcriptase | 3.1e-100 | 78.9 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENV MDFITGLPRTLRGFTVI VVVD+LTKSAHF
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHF---------------------------
Query: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
VSDRDARFTSKFWKGLQTAM T LDFSTAFHPQTD QTERLNQVL+DMLRACA +FPGSWDSHLHLMEFAYNN +QATIGMAPFEALYG+ CRSPVC
Subjt: ---VSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
WGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQS ++
Subjt: WGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSSRR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 1.6e-24 | 31.94 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSA-----------------------------
+++++ E+V C CQ K+ +P G LQP+ E WE++ MDFIT LP + G+ + VVVD+ +K A
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSA-----------------------------
Query: -HFVSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALY
++D D FTS+ WK + FS + PQTD QTER NQ ++ +LR S P +W H+ L++ +YNN + M PFE ++
Subjt: -HFVSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALY
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| P0CT41 Transposon Tf2-12 polyprotein | 1.6e-24 | 31.94 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSA-----------------------------
+++++ E+V C CQ K+ +P G LQP+ E WE++ MDFIT LP + G+ + VVVD+ +K A
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSA-----------------------------
Query: -HFVSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALY
++D D FTS+ WK + FS + PQTD QTER NQ ++ +LR S P +W H+ L++ +YNN + M PFE ++
Subjt: -HFVSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALY
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.2e-26 | 31.3 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFV--------------------------
++ + +++ C+ CQ +K+ R R GLLQPL + E +W ++ MDF+TGLP T +I VVVD+ +K AHF+
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFV--------------------------
Query: ----SDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
SDRD R T+ ++ L + S+A HPQTD Q+ER Q L +LRA S +W +L +EF YN+ T+G +PFE G +P
Subjt: ----SDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WG--EVGEQRLMGPELVQ-------STNEAIQKIRSCMHTAQSSRR
EV + EL + T E ++ + M T + RR
Subjt: WG--EVGEQRLMGPELVQ-------STNEAIQKIRSCMHTAQSSRR
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 7.6e-27 | 31.71 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFV--------------------------
++ + +++ C+ CQ +K+ R R GLLQPL + E +W ++ MDF+TGLP T +I VVVD+ +K AHF+
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSAHFV--------------------------
Query: ----SDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
SDRD R T+ ++ L + S+A HPQTD Q+ER Q L +LRA AS +W +L +EF YN+ T+G +PFE G +P
Subjt: ----SDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALYGKRCRSPVC
Query: WG--EVGEQRLMGPELVQ-------STNEAIQKIRSCMHTAQSSRR
EV + EL + T E ++ + M T + RR
Subjt: WG--EVGEQRLMGPELVQ-------STNEAIQKIRSCMHTAQSSRR
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.6e-24 | 31.94 | Show/hide |
Query: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSA-----------------------------
+++++ E+V C CQ K+ +P G LQP+ E WE++ MDFIT LP + G+ + VVVD+ +K A
Subjt: MKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVYMDFITGLPRTLRGFTVIRVVVDKLTKSA-----------------------------
Query: -HFVSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALY
++D D FTS+ WK + FS + PQTD QTER NQ ++ +LR S P +W H+ L++ +YNN + M PFE ++
Subjt: -HFVSDRDARFTSKFWKGLQTAMATGLDFSTAFHPQTDDQTERLNQVLKDMLRACASKFPGSWDSHLHLMEFAYNNRFQATIGMAPFEALY
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