CuGenDBv2

Gene ID	Cmc01g0019661
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:17573454..17575929
RNA-Seq Expression	Cmc01g0019661
Synteny	Cmc01g0019661
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025917.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

99.38

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKNHE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQLSDPYLAEKRRMVET QGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLRR V
Subjt:  SMLRRSV

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

A0A5A7TP01 Reverse transcriptase

0.0e+00

99.38

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKNHE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQLSDPYLAEKRRMVET QGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLRR V
Subjt:  SMLRRSV

A0A5A7V2A0 Reverse transcriptase

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

A0A5D3BTN0 Reverse transcriptase

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

A0A5D3C6W3 Reverse transcriptase

0.0e+00

96.65

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL DPYLAEKRR+VET QGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.1e-129

33.09

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR
            + Q+++    + +++    +D  L     +    +  E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR

Query:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV
        G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G 
Subjt:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV

Query:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP
        P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP

Query:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSAV-HDVFHVSMLRR
        P S+  +    FHVS L +
Subjt:  PPSLSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein

3.1e-129

33.09

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR
            + Q+++    + +++    +D  L     +    +  E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR

Query:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV
        G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G 
Subjt:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV

Query:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP
        P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP

Query:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSAV-HDVFHVSMLRR
        P S+  +    FHVS L +
Subjt:  PPSLSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein

3.1e-129

33.09

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR
            + Q+++    + +++    +D  L     +    +  E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR

Query:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV
        G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G 
Subjt:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV

Query:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP
        P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP

Query:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSAV-HDVFHVSMLRR
        P S+  +    FHVS L +
Subjt:  PPSLSAV-HDVFHVSMLRR

P0CT37 Transposon Tf2-4 polyprotein

3.1e-129

33.09

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR
            + Q+++    + +++    +D  L     +    +  E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR

Query:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV
        G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G 
Subjt:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV

Query:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP
        P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP

Query:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSAV-HDVFHVSMLRR
        P S+  +    FHVS L +
Subjt:  PPSLSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein

3.1e-129

33.09

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR
            + Q+++    + +++    +D  L     +    +  E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR

Query:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV
        G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G 
Subjt:  GMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGV

Query:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP
        P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEGLYG-KCCRSP

Query:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSAV-HDVFHVSMLRR
        P S+  +    FHVS L +
Subjt:  PPSLSAV-HDVFHVSMLRR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.7e-27

44.27

Show/hide

Query:  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    H+ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV
        +     +F+ LK  + T PVL +PD    FV
Subjt:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGCCTTTGCATTGACTACCGAGAGTTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTACCCAGGATTGAGGACTTGTTTGACCAGTTACAGGGGGCCACCGTCTT
TTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGT
CCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTAT
TCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGT
GACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTT
TTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCA
TGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGG
ACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAG
TCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGG
CAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGC
AGCGCTAATCACGAAGCAGACCCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACAGTTCAGCCAA
CCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACGGGGCAAGGTGAAGAGTTCTCTATATCCTCTGATGAT
GGCCTTATGTTTGAGGGGCGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAA
GATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGC
ATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATC
TGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACACTGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGACTGCA
CGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCC
ACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATG
GAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGGTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCA
GAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACCGCACAGAGCAGACAGAAGAGTTACGCTGATGTACGAC
GTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCGATGAAGGGCGTTCTGAGGTTCGAGAAGAAGGGGAAGTTGAGTCCACGTTTCGTGGGG
CCATTTGAGATACTGGAACGGATTGGCCCTGTGGCTTATCGTTTGGCCTTGCCCCCATCCCTCTCAGCAGTGCATGACGTATTCCATGTCTCCATGTTGAGGAGGTCAGT
GAGAACTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIY
SKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMR
QRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETGQGEEFSISSDD
GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI
WVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLM
EFAYNNSYQATIGMAPFEGLYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSVRT

Cmc01g0019661 (gene) of Melon (Charmono) v1.1 genome