| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-199 | 84.12 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTV+TPTIKLSNTYHVPN TFNLASVG +G GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
Query: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
AISAPV DNTLFQWHLRLGHAS NKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSF KSASLC+KPFGLIH DIWGPAPCPTVNGYRY
Subjt: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
Query: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
FVLFI+DYS FTWIYFLRNRSSLYQIYVDFAN IQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD +RAQLLS
Subjt: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
Query: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
GSCPEKFWGEA LTSVYVINRLPSQVIHNISPFERLYGT P+YSHLKVFGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHGFLVFLH
TFWEHRMFSSLSSFH L H
Subjt: TFWEHRMFSSLSSFHGFLVFLH
|
|
| KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-156 | 66.34 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
MTSD SL+++ P +SLPPI++ADGN M+I+H+GT++TP++ L +TY VPN TFNL SVG +G + GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
Query: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
+ +ISAPV D+ +QWHLRLGHAS KLR L S LN++++F F+CL+CK+AKQPALSF S S+C+KPF LIH DIWGPAP TV+GYRY+V
Subjt: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
Query: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
LFI+D+S FTWIYFL++RS L + Y++FAN I+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILD +RA LLS S
Subjt: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
Query: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
CPEKFWGEA LTSVY INRLPS V+ NISPFERLYGT P+YS+LKVFGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDP+S RLRISRHVTF
Subjt: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
Query: WEHRMFSSLSSFH
WEH MFS LSSFH
Subjt: WEHRMFSSLSSFH
|
|
| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-199 | 84.12 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTV+TPTIKLSNTYHVPN TFNLASVG +G GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
Query: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
AISAPV DNTLFQWHLRLGHAS NKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSF KSASLC+KPFGLIH DIWGPAPCPTVNGYRY
Subjt: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
Query: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
FVLFI+DYS FTWIYFLRNRSSLYQIYVDFAN IQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD +RAQLLS
Subjt: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
Query: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
GSCPEKFWGEA LTSVYVINRLPSQVIHNISPFERLYGT P+YSHLKVFGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHGFLVFLH
TFWEHRMFSSLSSFH L H
Subjt: TFWEHRMFSSLSSFHGFLVFLH
|
|
| KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-199 | 84.12 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTV+TPTIKLSNTYHVPN TFNLASVG +G GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
Query: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
AISAPV DNTLFQWHLRLGHAS NKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSF KSASLC+KPFGLIH DIWGPAPCPTVNGYRY
Subjt: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
Query: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
FVLFI+DYS FTWIYFLRNRSSLYQIYVDFAN IQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD +RAQLLS
Subjt: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
Query: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
GSCPEKFWGEA LTSVYVINRLPSQVIHNISPFERLYGT P+YSHLKVFGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHGFLVFLH
TFWEHRMFSSLSSFH L H
Subjt: TFWEHRMFSSLSSFHGFLVFLH
|
|
| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-156 | 66.34 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
MTSD SL+++ P +SLPPI++ADGN M+I+H+GT++TP++ L +TY VPN TFNL SVG +G + GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
Query: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
+ +ISAPV D+ +QWHLRLGHAS KLR L S LN++++F F+CL+CK+AKQPALSF S S+C+KPF LIH DIWGPAP TV+GYRY+V
Subjt: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
Query: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
LFI+D+S FTWIYFL++RS L + Y++FAN I+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILD +RA LLS S
Subjt: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
Query: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
CPEKFWGEA LTSVY INRLPS V+ NISPFERLYGT P+YS+LKVFGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDP+S RLRISRHVTF
Subjt: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
Query: WEHRMFSSLSSFH
WEH MFS LSSFH
Subjt: WEHRMFSSLSSFH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-200 | 84.12 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTV+TPTIKLSNTYHVPN TFNLASVG +G GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
Query: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
AISAPV DNTLFQWHLRLGHAS NKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSF KSASLC+KPFGLIH DIWGPAPCPTVNGYRY
Subjt: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
Query: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
FVLFI+DYS FTWIYFLRNRSSLYQIYVDFAN IQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD +RAQLLS
Subjt: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
Query: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
GSCPEKFWGEA LTSVYVINRLPSQVIHNISPFERLYGT P+YSHLKVFGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHGFLVFLH
TFWEHRMFSSLSSFH L H
Subjt: TFWEHRMFSSLSSFHGFLVFLH
|
|
| A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-200 | 84.12 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTV+TPTIKLSNTYHVPN TFNLASVG +G GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
Query: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
AISAPV DNTLFQWHLRLGHAS NKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSF KSASLC+KPFGLIH DIWGPAPCPTVNGYRY
Subjt: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
Query: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
FVLFI+DYS FTWIYFLRNRSSLYQIYVDFAN IQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD +RAQLLS
Subjt: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
Query: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
GSCPEKFWGEA LTSVYVINRLPSQVIHNISPFERLYGT P+YSHLKVFGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHGFLVFLH
TFWEHRMFSSLSSFH L H
Subjt: TFWEHRMFSSLSSFHGFLVFLH
|
|
| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-156 | 66.34 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
MTSD SL+++ P +SLPPI++ADGN M+I+H+GT++TP++ L +TY VPN TFNL SVG +G + GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
Query: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
+ +ISAPV D+ +QWHLRLGHAS KLR L S LN++++F F+CL+CK+AKQPALSF S S+C+KPF LIH DIWGPAP TV+GYRY+V
Subjt: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
Query: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
LFI+D+S FTWIYFL++RS L + Y++FAN I+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILD +RA LLS S
Subjt: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
Query: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
CPEKFWGEA LTSVY INRLPS V+ NISPFERLYGT P+YS+LKVFGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDP+S RLRISRHVTF
Subjt: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
Query: WEHRMFSSLSSFH
WEH MFS LSSFH
Subjt: WEHRMFSSLSSFH
|
|
| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-156 | 66.34 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
MTSD SL+++ P +SLPPI++ADGN M+I+H+GT++TP++ L +TY VPN TFNL SVG +G + GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYG------
Query: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
+ +ISAPV D+ +QWHLRLGHAS KLR L S LN++++F F+CL+CK+AKQPALSF S S+C+KPF LIH DIWGPAP TV+GYRY+V
Subjt: -----TEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFV
Query: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
LFI+D+S FTWIYFL++RS L + Y++FAN I+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILD +RA LLS S
Subjt: LFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGS
Query: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
CPEKFWGEA LTSVY INRLPS V+ NISPFERLYGT P+YS+LKVFGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDP+S RLRISRHVTF
Subjt: CPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTF
Query: WEHRMFSSLSSFH
WEH MFS LSSFH
Subjt: WEHRMFSSLSSFH
|
|
| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-200 | 84.12 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTV+TPTIKLSNTYHVPN TFNLASVG +G GT G
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPTIKLSNTYHVPNFTFNLASVG----------------------SGFSDGTSDWYGT-----
Query: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
AISAPV DNTLFQWHLRLGHAS NKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSF KSASLC+KPFGLIH DIWGPAPCPTVNGYRY
Subjt: --------EAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRY
Query: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
FVLFI+DYS FTWIYFLRNRSSLYQIYVDFAN IQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD +RAQLLS
Subjt: FVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLS
Query: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
GSCPEKFWGEA LTSVYVINRLPSQVIHNISPFERLYGT P+YSHLKVFGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHGFLVFLH
TFWEHRMFSSLSSFH L H
Subjt: TFWEHRMFSSLSSFHGFLVFLH
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.3e-39 | 29.8 | Show/hide |
Query: NTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSF--LKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFVLFINDYSC
N WH R GH S KL + + ++ S N + C C KQ L F LK + +P ++H D+ GP T++ YFV+F++ ++
Subjt: NTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSF--LKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFVLFINDYSC
Query: FTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGSCPEKFWGE
+ Y ++ +S ++ ++ DF + + F+ K+ L DN EY + F ++G + PHT Q NG +ER R I + R + + FWGE
Subjt: FTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGSCPEKFWGE
Query: AVLTSVYVINRLPSQVIHNIS--PFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHRMF
AVLT+ Y+INR+PS+ + + S P+E + P HL+VFG +V + ++ K + ++ F+GY + GF+ WD ++++ ++R V E M
Subjt: AVLTSVYVINRLPSQVIHNIS--PFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHRMF
Query: SS
+S
Subjt: SS
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-49 | 31.67 | Show/hide |
Query: TIKLSNTYHVPNFTFNLASVGSGFSDGTSDWY---------GTEAISAPVIDNTLFQ---------------------WHLRLGHASFNKLRSLTSTGLL
T+ L + HVP+ NL S + DG ++ G+ I+ V TL++ WH R+GH S L+ L L+
Subjt: TIKLSNTYHVPNFTFNLASVGSGFSDGTSDWY---------GTEAISAPVIDNTLFQ---------------------WHLRLGHASFNKLRSLTSTGLL
Query: NNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKI
+ C +C KQ +SF S+ L++ D+ GP ++ G +YFV FI+D S W+Y L+ + ++Q++ F ++ + K+K
Subjt: NNVSQFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTVNGYRYFVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKI
Query: LRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYS
LR+DN EY F + + G +++ P T Q NG AER +R I++ +R+ L P+ FWGEAV T+ Y+INR PS + P SYS
Subjt: LRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYS
Query: HLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWE
HLKVFGC F + + TKL+ ++ C F+GYG + G+R WDP+ +++ SR V F E
Subjt: HLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWE
|
|
| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 2.4e-14 | 24.36 | Show/hide |
Query: GTVSTPTIK------LSNTYHVPNFTFNLASVGSGFSDGTSDWYGTEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNV-------SQFNTFDC
GTV P +K LS Y +P+ L S + + P+I H LGHA+F ++ + + S +T+ C
Subjt: GTVSTPTIK------LSNTYHVPNFTFNLASVGSGFSDGTSDWYGTEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNV-------SQFNTFDC
Query: LHCKMAKQPALSFLKSASL----CNKPFGLIHYDIWGPAPCPTVNGYRYFVLFINDYSCFTWIYFLRNR--SSLYQIYVDFANRIQTQFSSKIKILRTDN
C + K +K + L +PF +H DI+GP + YF+ F ++ + F W+Y L +R S+ ++ I+ QF++++ +++ D
Subjt: LHCKMAKQPALSFLKSASL----CNKPFGLIHYDIWGPAPCPTVNGYRYFVLFINDYSCFTWIYFLRNR--SSLYQIYVDFANRIQTQFSSKIKILRTDN
Query: AMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGSCPEKFWGEAVLTSVYVINRLPS
EY + F +G + S+ +G AER +R +L+ R L P W AV S + N L S
Subjt: AMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIRAQLLSGSCPEKFWGEAVLTSVYVINRLPS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.2e-55 | 31.95 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPT----IKLSNTYHVPNFTFNLASV-----GSGFS-------------------------DG
+TSD + LS H P + ADG+++ ISH G+ S T + L N +VPN NL SV +G S D
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPT----IKLSNTYHVPNFTFNLASV-----GSGFS-------------------------DG
Query: TSDW-----YGTEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTV
+W ++P T WH RLGH + + L S+ S L+ ++ + F C C + K + F +S +P I+ D+W +P +
Subjt: TSDW-----YGTEAISAPVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTV
Query: NGYRYFVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIR
+ YRY+V+F++ ++ +TW+Y L+ +S + + ++ F N ++ +F ++I +DN E+ + +Q G S PHT + NG +ERKHRHI++
Subjt: NGYRYFVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIR
Query: AQLLSGSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLR
L S P+ +W A +VY+INRLP+ ++ SPF++L+GT P+Y L+VFGCAC+ L P+ KL+ ++R C FLGY + C + RL
Subjt: AQLLSGSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLR
Query: ISRHVTFWEH
ISRHV F E+
Subjt: ISRHVTFWEH
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-54 | 31.98 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPT----IKLSNTYHVPNFTFNLASV-----------------------GSGF-------SDG
+TSD + LS H P + ADG+++ I+H G+ S PT + L+ +VPN NL SV +G D
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVSTPT----IKLSNTYHVPNFTFNLASV-----------------------GSGF-------SDG
Query: TSDW--YGTEAIS---APVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTV
+W ++A+S +P T WH RLGH S L S+ S L ++ C C + K + F S +KP I+ D+W +P ++
Subjt: TSDW--YGTEAIS---APVIDNTLFQWHLRLGHASFNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFLKSASLCNKPFGLIHYDIWGPAPCPTV
Query: NGYRYFVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIR
+ YRY+V+F++ ++ +TW+Y L+ +S + ++ F + ++ +F ++I L +DN E+ R +L+Q G S PHT + NG +ERKHRHI++
Subjt: NGYRYFVLFINDYSCFTWIYFLRNRSSLYQIYVDFANRIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDFIR
Query: AQLLSGSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLR
L S P+ +W A +VY+INRLP+ ++ SPF++L+G P+Y LKVFGCAC+ L P+ KLE +++ C F+GY + C + RL
Subjt: AQLLSGSCPEKFWGEAVLTSVYVINRLPSQVIHNISPFERLYGTLPSYSHLKVFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLR
Query: ISRHVTFWEHRMFSSLSSF
SRHV F E S ++F
Subjt: ISRHVTFWEHRMFSSLSSF
|
|
