CuGenDBv2

Gene ID	Cmc01g0019991
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Genome location	CMiso1.1chr01:18017239..18017580
RNA-Seq Expression	Cmc01g0019991
Synteny	Cmc01g0019991
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domains	IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.8e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.8e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.8e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.8e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.8e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

1.3e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

A0A5A7V0Y9 Beta-galactosidase

1.3e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

A0A5A7VLQ7 Beta-galactosidase

1.3e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

A0A5D3BJK7 Beta-galactosidase

1.3e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

A0A5D3C4T4 Beta-galactosidase

1.3e-49

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Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V VNKDWPLYQL+VKNAFLNG
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNG

Query:  DLVEEVYMSP
        DLVEEVYMSP
Subjt:  DLVEEVYMSP

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

2.8e-20

47.17

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Query:  EIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGDL
        E+ A + N TW I   P+    V  +WVFS+KY   G   R+KARLVA+GFTQ Y IDY ETF+ VA+++    +L +V+  +  ++Q++VK AFLNG L
Subjt:  EIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGDL

Query:  VEEVYM
         EE+YM
Subjt:  VEEVYM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

5.1e-22

49.53

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Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD
        EE+E+L+KN T+++  LPK  + + CKWVF LK   D  L R+KARLV KGF Q  GID+ E FS V K+  +  +L +  + D  + QL+VK AFL+GD
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD

Query:  LVEEVYM
        L EE+YM
Subjt:  LVEEVYM

P92520 Uncharacterized mitochondrial protein AtMg00820

2.3e-14

50.63

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Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV
        EE++AL +NKTW +   P     +GCKWVF  K  +DGTLDR KARLVAKGF Q  GI + ET+S V +   +  +L V
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

2.9e-25

50.93

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Query:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD
        EI A   N TW++   P  H   VGC+W+F+ KY +DG+L+R+KARLVAKG+ Q  G+DY+ETFS V K   + ++L V V++ WP+ QL+V NAFL G 
Subjt:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD

Query:  LVEEVYMS
        L ++VYMS
Subjt:  LVEEVYMS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

5.5e-24

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Query:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD
        EI A   N TW++   P      VGC+W+F+ K+ +DG+L+R+KARLVAKG+ Q  G+DY+ETFS V K   + ++L V V++ WP+ QL+V NAFL G 
Subjt:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD

Query:  LVEEVYMS
        L +EVYMS
Subjt:  LVEEVYMS

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

1.1e-30

56.07

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Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD
        +EI A+E   TWEIC LP   K +GCKWV+ +KY +DGT++R+KARLVAKG+TQ  GID+ ETFS V KL  V ++L +    ++ L+QL++ NAFLNGD
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGD

Query:  LVEEVYM
        L EE+YM
Subjt:  LVEEVYM

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)

1.6e-15

50.63

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Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV
        EE++AL +NKTW +   P     +GCKWVF  K  +DGTLDR KARLVAKGF Q  GI + ET+S V +   +  +L V
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV

Sequences

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CDS sequence

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ATGGAAGAGATAGAGGCTCTTGAAAAGAATAAAACTTGGGAGATCTGTGCTCTACCCAAAAGACATAAAAATGTAGGATGCAAATGGGTGTTCTCTCTCAAATAC
AAAGCAGATGGTACGCTTGATAGACACAAGGCAAGGTTAGTTGCAAAGGGATTTACTCAGACCTATGGTATTGATTATTCAGAAACCTTTTCTCTAGTTGCTAAG
TTGAATATTGTTATAGTCCTACTATATGTTGTTGTGAACAAAGATTGGCCTCTATACCAGTTGAATGTTAAGAATGCTTTTTTGAATGGAGACCTTGTGGAAGAA
GTCTACATGAGCCCCGCCAGGATTTGA

mRNA sequence

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Protein sequence

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MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVVNKDWPLYQLNVKNAFLNGDLVEE
VYMSPARI

Cmc01g0019991 (gene) of Melon (Charmono) v1.1 genome