CuGenDBv2

Gene ID	Cmc01g0020161
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:18261224..18262672
RNA-Seq Expression	Cmc01g0020161
Synteny	Cmc01g0020161
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036584.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.3e-248

100

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKACCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV
        IATPLTQLTRKGALFVWSKACCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV
Subjt:  IATPLTQLTRKGALFVWSKACCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV

Query:  KDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
        KDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
Subjt:  KDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS

Query:  DGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPG
        DGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPG
Subjt:  DGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPG

KAA0040689.1 pol protein [Cucumis melo var. makuwa]

3.3e-239

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGHVVSKA VSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVVADALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDS IKTELLSEAHSSPFSMHPGSTKMYQDL
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

KAA0046185.1 pol protein [Cucumis melo var. makuwa]

1.9e-239

88.59

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGH+VSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVV DALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDL
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

5.7e-239

88.59

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVVADALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSV+KTELLSEAHSSPFSMHPGSTKMY+D+
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

TYK01613.1 pol protein [Cucumis melo var. makuwa]

2.2e-238

88.38

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVVADALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDL
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SZ74 Ty3-gypsy retrotransposon protein

6.5e-249

100

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKACCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV
        IATPLTQLTRKGALFVWSKACCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV
Subjt:  IATPLTQLTRKGALFVWSKACCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV

Query:  KDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
        KDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
Subjt:  KDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS

Query:  DGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPG
        DGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPG
Subjt:  DGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPG

A0A5A7THE6 Reverse transcriptase

1.6e-239

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGHVVSKA VSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVVADALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDS IKTELLSEAHSSPFSMHPGSTKMYQDL
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

A0A5A7TXM6 Reverse transcriptase

9.4e-240

88.59

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGH+VSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVV DALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDL
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

A0A5A7U330 Reverse transcriptase

2.7e-239

88.59

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVVADALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSV+KTELLSEAHSSPFSMHPGSTKMY+D+
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

A0A5D3BPI1 Reverse transcriptase

1.0e-238

88.38

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREF+DTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQT RDNKL+AKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF+ENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGA FVWSKAC                                      CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGALFVWSKAC--------------------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY+PGKANVVADALSRKVSHSAALITRQAPLHRDLERA+IAVSVG VTMQLAQLT
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGVVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDL
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDL

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

6.6e-65

36.29

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Query:  RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFVI
        R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF +K+GHYE++ M FGL NAPA F   MN + R  ++   +
Subjt:  RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFVI

Query:  VFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRI
        V++DDI+++S +  EH + L +V +      L  +  KCEF  ++ +FLGHV++   +  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+ I
Subjt:  VFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRI

Query:  ATPLTQLTRKG-----------ALFVWSKAC----------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        A P+T+  +K            + F   K                               VL Q G  ++Y SR L  HE NY T + EL A+V+A K +
Subjt:  ATPLTQLTRKG-----------ALFVWSKAC----------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSR
         HYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSR

P0CT34 Transposon Tf2-1 polyprotein

9.0e-62

30.72

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        + ++DDILI+SK+E+EH +H++ VLQ  ++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWS----------KAC----------------------------CVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+          K C                             VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGALFVWS----------KAC----------------------------CVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWMHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGV
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWMHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGV

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSVIKTELLSEAHSSPFSMHPG
            + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSVIKTELLSEAHSSPFSMHPG

P0CT35 Transposon Tf2-2 polyprotein

9.0e-62

30.72

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        + ++DDILI+SK+E+EH +H++ VLQ  ++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWS----------KAC----------------------------CVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+          K C                             VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGALFVWS----------KAC----------------------------CVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWMHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGV
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWMHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGV

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSVIKTELLSEAHSSPFSMHPG
            + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSVIKTELLSEAHSSPFSMHPG

P0CT41 Transposon Tf2-12 polyprotein

9.0e-62

30.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR
        + ++DDILI+SK+E+EH +H++ VLQ  ++  L    +KCEF   QV F+G+ +S+   +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSR

Query:  IATPLTQLTRKGALFVWS----------KAC----------------------------CVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+          K C                             VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGALFVWS----------KAC----------------------------CVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWMHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGV
        +LK W HYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWMHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAALITRQAPLHRDLERAKIAVSVGV

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSVIKTELLSEAHSSPFSMHPG
            + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSVIKTELLSEAHSSPFSMHPG

P20825 Retrovirus-related Pol polyprotein from transposon 297

1.5e-64

36.01

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Query:  RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFVI
        R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF +K GHYE++ M FGL NAPA F   MN + R  ++   +
Subjt:  RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFVI

Query:  VFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRI
        V++DDI+I+S +  EH   +++V     D  L  +  KCEF  K+ +FLGH+V+   +  +P K++A+ S+  P+   E+R+FLGL GYYR+F+ N++ I
Subjt:  VFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRI

Query:  ATPLTQLTRKGA-----------LFVWSKAC----------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        A P+T   +K              F   KA                              VL Q G  +++ SR L  HE NY   + EL A+V+A K +
Subjt:  ATPLTQLTRKGA-----------LFVWSKAC----------------------------CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSR
         HYL G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADALSR
Subjt:  MHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.0e-20

46.39

Show/hide

Query:  HLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLG--HVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRIATPLTQLTRKGAL
        HL MVLQ +  ++ +A   KC F   Q+++LG  H++S   VS DPAK+EA+  W  P   +E+R FLGL GYYRRF++N+ +I  PLT+L +K +L
Subjt:  HLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLG--HVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRIATPLTQLTRKGAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCTTTGCCCAGGATCGACGATCTGTTTGACCAATTACAGGGAGCTACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAAATATGGACACTATGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTTGTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATAT
TCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACATTTCGGGATAATAAACTGCATGCAAAGTTTTCGAAATGCGAGTTTTGGCTGAAGCAGGT
GTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGAAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCT
TTCTGGGTCTAGCAGGTTATTATCGACGGTTTTTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCTTTTTGTTTGGAGCAAGGCA
TGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTT
TGCTTTGAAAATATGGATGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGC
GAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATTATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCAGCAGCA
CTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTAAGATTGCAGTGTCAGTGGGGGTAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTT
GAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCGTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGAC
TTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGTGATTAAAACAGAATTATTATCTGAGGCTCACAGTTCTCCATTTTCCATGCACCCAGGTAGTACGAAGATG
TATCAGGACCTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFVDTFVIVFIDDILIY
SKTEAEHEEHLRMVLQTFRDNKLHAKFSKCEFWLKQVSFLGHVVSKAEVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFLENFSRIATPLTQLTRKGALFVWSKA
CCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWMHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYYPGKANVVADALSRKVSHSAA
LITRQAPLHRDLERAKIAVSVGVVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKM
YQDL

Cmc01g0020161 (gene) of Melon (Charmono) v1.1 genome