| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-263 | 94.78 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-263 | 94.78 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.0e-201 | 77.45 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-263 | 94.78 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.9e-196 | 70.7 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSD SL+++ P +SLPPI++ADGN M+I+H+GT+NTP++ L +TY VPNLTFNL SVGQLCDLG T+ FSS+GCQVQD QTGQ IGTGRKVGRLFEL
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S Q P+ISAPVTD+ +QWHLRLGHAS KLR L S LN++++F F+CL+CK+AKQPALSF S S+CDKPF LIHSDIWGPAP TV+GYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
+VLFIDD+SRFTWIYFL++RS L + Y++FANMI+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
SCPEKFWGEAALTSVY INRLPS V+ NISPFERLYGTPP YS+LKVFGCACFVLL HEHTKLEPRARLCCFLGYGTEHKGFRCWDP+S RLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS----------PSNTTSCPHSHLSSLNRTLPPHSRNSHLSPVRNLNMHLSD
TFWEH MFS LSSFHAS SSP SFFTD S LFP +S P++ TS S +S N PP + VR +HL D
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS----------PSNTTSCPHSHLSSLNRTLPPHSRNSHLSPVRNLNMHLSD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-263 | 94.78 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-201 | 77.45 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-263 | 94.78 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-196 | 70.7 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSD SL+++ P +SLPPI++ADGN M+I+H+GT+NTP++ L +TY VPNLTFNL SVGQLCDLG T+ FSS+GCQVQD QTGQ IGTGRKVGRLFEL
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S Q P+ISAPVTD+ +QWHLRLGHAS KLR L S LN++++F F+CL+CK+AKQPALSF S S+CDKPF LIHSDIWGPAP TV+GYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
+VLFIDD+SRFTWIYFL++RS L + Y++FANMI+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
SCPEKFWGEAALTSVY INRLPS V+ NISPFERLYGTPP YS+LKVFGCACFVLL HEHTKLEPRARLCCFLGYGTEHKGFRCWDP+S RLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS----------PSNTTSCPHSHLSSLNRTLPPHSRNSHLSPVRNLNMHLSD
TFWEH MFS LSSFHAS SSP SFFTD S LFP +S P++ TS S +S N PP + VR +HL D
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS----------PSNTTSCPHSHLSSLNRTLPPHSRNSHLSPVRNLNMHLSD
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| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-263 | 94.78 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
S QHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYR
Subjt: SFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRC
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS
Query: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Subjt: GSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHV
Query: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP SH +S LP P H +PVR
Subjt: TFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP-------HSHLSSLNRTLP--PHSRNSHLSPVR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.0e-39 | 26.64 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSA---DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVG
+ +D SL + + V +PP+ A G + + G V N I L + NL SV +L + G++I F G + S+ G ++ +
Subjt: MTSDISLLSSHIPVQSLPPIHSA---DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVG
Query: RLFELTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIW
+ +FQ +I+A +N WH R GH S KL + + ++ S N + C C KQ L F K + +P ++HSD+
Subjt: RLFELTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIW
Query: GPAPCPTVNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKH
GP T++ FV+F+D ++ + Y ++ +S ++ ++ DF + F+ K+ L DN EY + F ++G + PHT Q NG +ER
Subjt: GPAPCPTVNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKH
Query: RHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNIS--PFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFR
R I + R + + FWGEA LT+ Y+INR+PS+ + + S P+E + P HL+VFG +V + ++ K + ++ F+GY E GF+
Subjt: RHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNIS--PFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFR
Query: CWDPISQRLRISRHVTFWEHRMFSSLS------SFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPHSHL-----SSLNRTLPPHSR
WD ++++ ++R V E M +S + S S + F + S + T + P+ + C + S N+ P SR
Subjt: CWDPISQRLRISRHVTFWEHRMFSSLS------SFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPHSHL-----SSLNRTLPPHSR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-52 | 32.1 | Show/hide |
Query: TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLT
T+ L + HVP+L NL S L G F++ ++ ++ VI G G L+ + ++A + ++ WH R+GH S L+ L
Subjt: TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLT
Query: STGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFS
L++ C +C KQ +SF S+ L++SD+ GP ++ G + FV FIDD SR W+Y L+ + ++Q++ F +++ +
Subjt: STGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFS
Query: SKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGT
K+K LR+DN EY F + + G +++ P T Q NG AER +R I++ VR+ L P+ FWGEA T+ Y+INR PS + P
Subjt: SKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGT
Query: PPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLS-SFHASLSSPHSFFTDPSTPLFPTPDS
+YSHLKVFGC F + + TKL+ ++ C F+GYG E G+R WDP+ +++ SR V F E + ++ S +F T PST PT S
Subjt: PPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLS-SFHASLSSPHSFFTDPSTPLFPTPDS
Query: PSNTT
+TT
Subjt: PSNTT
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 6.6e-18 | 25.14 | Show/hide |
Query: SSHIPVQSLPPIHSADGN-----------SMSISHIGTV------NTPT-IKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTG
+S ++S IHSA N ++ I+ IG + NT T IK+ H PN+ ++L S+ +L + +T F+ + V + G V+
Subjt: SSHIPVQSLPPIHSADGN-----------SMSISHIGTV------NTPT-IKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTG
Query: RKVGRLFELTSFQHSP---VFPAISAPVTDNTLFQW-----HLRLGHASSNKLRSLTSTGLLNNVSQFNTFD----------CLHCKMAKQPALSFPKSA
K G + ++ P P I+ T + ++ H L HA++ +R N ++ FN D C C + K K +
Subjt: RKVGRLFELTSFQHSP---VFPAISAPVTDNTLFQW-----HLRLGHASSNKLRSLTSTGLLNNVSQFNTFD----------CLHCKMAKQPALSFPKSA
Query: SL----CDKPFGLIHSDIWGPAPCPTVNGYRCFVLFIDDYSRFTWIYFLRNR--SSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
L +PF +H+DI+GP + F+ F D+ ++F W+Y L +R S+ ++ I+ QF + + +++ D EY + FL + G
Subjt: SL----CDKPFGLIHSDIWGPAPCPTVNGYRCFVLFIDDYSRFTWIYFLRNR--SSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Query: TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPS
+ S+ +G AER +R +LD R QL P W A S V N L S
Subjt: TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-65 | 32.64 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGR
+TSD + LS H P + ADG+++ ISH G+ + T + L N +VPN+ NL SV +LC+ G+++ F QV+D TG + G+
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGR
Query: LFELTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPT
L+E PV ++P + T WH RLGH + + L S+ S L+ ++ + F C C + K + F +S +P I+SD+W +P +
Subjt: LFELTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPT
Query: VNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
+ YR +V+F+D ++R+TW+Y L+ +S + + ++ F N+++ +F ++I +DN E+ + +Q G S PHT + NG +ERKHRHI+++
Subjt: VNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
Query: RAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRL
L S P+ +W A +VY+INRLP+ ++ SPF++L+GT P Y L+VFGCAC+ L + KL+ ++R C FLGY + C + RL
Subjt: RAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRL
Query: RISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPHSHLSSLNRTLPPHSRNSHLSPVRNLNMHLSD
ISRHV F E+ S++ A+LS + S P P+ T P S + P S S +P RN + S+
Subjt: RISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCPHSHLSSLNRTLPPHSRNSHLSPVRNLNMHLSD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.6e-64 | 33.26 | Show/hide |
Query: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGR
+TSD + LS H P + ADG+++ I+H G+ + PT + L+ +VPN+ NL SV +LC+ +++ F QV+D TG + G+
Subjt: MTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGR
Query: LFE--LTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPC
L+E + S Q +F ++P + T WH RLGH S L S+ S L ++ C C + K + F S KP I+SD+W +P
Subjt: LFE--LTSFQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPC
Query: PTVNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD
+++ YR +V+F+D ++R+TW+Y L+ +S + ++ F ++++ +F ++I L +DN E+ R +L+Q G S PHT + NG +ERKHRHI++
Subjt: PTVNGYRCFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD
Query: SVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQ
L S P+ +W A +VY+INRLP+ ++ SPF++L+G PP Y LKVFGCAC+ L + KLE +++ C F+GY + C +
Subjt: SVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQ
Query: RLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTP---LFPTPDSPSNTTSCPHSHLSSLNRTLPPHS
RL SRHV F E S ++F S S + P+ P PT C HL + R PP S
Subjt: RLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTP---LFPTPDSPSNTTSCPHSHLSSLNRTLPPHS
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