; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0020231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0020231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationCMiso1.1chr01:18404845..18405504
RNA-Seq ExpressionCmc01g0020231
SyntenyCmc01g0020231
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040609.1 DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]5.3e-11389.5Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGG DSIMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGIPNSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+ A+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++ QNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        RELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

KAA0066550.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.2e-11489.95Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGGYDSIMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGI NSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+SA+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++AQNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        +ELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

TYJ98047.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]6.9e-11389.04Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI+GLPKAGGYD+IMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGI NSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+ A+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++AQNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        RELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

TYK05651.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.8e-11489.95Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGGYDSIMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGIPNSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+ A+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++ QNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        RELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

TYK22650.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]4.0e-12199.07Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKL
        RELKFRIGGE+ LKL
Subjt:  RELKFRIGGEVYLKL

TrEMBL top hitse value%identityAlignment
A0A5A7TH70 DNA polymerase epsilon catalytic subunit2.6e-11389.5Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGG DSIMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGIPNSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+ A+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++ QNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        RELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

A0A5A7VHA7 Ty3/gypsy retrotransposon protein3.0e-11489.95Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGGYDSIMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGI NSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+SA+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++AQNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        +ELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

A0A5D3BFZ9 Transposon Tf2-6 polyprotein3.3e-11389.04Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI+GLPKAGGYD+IMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGI NSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+ A+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++AQNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        RELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

A0A5D3C142 Retrotransposable element Tf22.3e-11489.95Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGGYDSIMVVVDRLSK+AHFI LKHPF+ KQVAEKFVEEIISKHGIPNSIVTDRDK+FLSHFWKELFTAMGT+LKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYL CFCNEQPTKWHKCIPWAELWYNTTFH+ A+TTPFQ+VYGRPPPPLVRYGD KSNNN+VEQLL ERDLVISALKENL++ QNRMKKQA+ HR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKLRPYR
        RELKF++G EVYLKLRPYR
Subjt:  RELKFRIGGEVYLKLRPYR

A0A5D3DH29 Transposon Ty3-G Gag-Pol polyprotein2.0e-12199.07Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
        NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHR

Query:  RELKFRIGGEVYLKL
        RELKFRIGGE+ LKL
Subjt:  RELKFRIGGEVYLKL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein5.3e-3135.62Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI  LP++ GY+++ VVVDR SK+A  +P     T +Q A  F + +I+  G P  I+ D D IF S  WK+        +K S  + PQTDGQTER 
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA
        N+ +E  L C C+  P  W   I   +  YN   HS+ + TPF+IV+       P  L  + DK   N+       E   V   +KE+L     +MKK  
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA

Query:  NSHRREL-KFRIGGEVYLK
        +   +E+ +F+ G  V +K
Subjt:  NSHRREL-KFRIGGEVYLK

P0CT35 Transposon Tf2-2 polyprotein5.3e-3135.62Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI  LP++ GY+++ VVVDR SK+A  +P     T +Q A  F + +I+  G P  I+ D D IF S  WK+        +K S  + PQTDGQTER 
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA
        N+ +E  L C C+  P  W   I   +  YN   HS+ + TPF+IV+       P  L  + DK   N+       E   V   +KE+L     +MKK  
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA

Query:  NSHRREL-KFRIGGEVYLK
        +   +E+ +F+ G  V +K
Subjt:  NSHRREL-KFRIGGEVYLK

P0CT36 Transposon Tf2-3 polyprotein5.3e-3135.62Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI  LP++ GY+++ VVVDR SK+A  +P     T +Q A  F + +I+  G P  I+ D D IF S  WK+        +K S  + PQTDGQTER 
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA
        N+ +E  L C C+  P  W   I   +  YN   HS+ + TPF+IV+       P  L  + DK   N+       E   V   +KE+L     +MKK  
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA

Query:  NSHRREL-KFRIGGEVYLK
        +   +E+ +F+ G  V +K
Subjt:  NSHRREL-KFRIGGEVYLK

P0CT41 Transposon Tf2-12 polyprotein5.3e-3135.62Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI  LP++ GY+++ VVVDR SK+A  +P     T +Q A  F + +I+  G P  I+ D D IF S  WK+        +K S  + PQTDGQTER 
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA
        N+ +E  L C C+  P  W   I   +  YN   HS+ + TPF+IV+       P  L  + DK   N+       E   V   +KE+L     +MKK  
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA

Query:  NSHRREL-KFRIGGEVYLK
        +   +E+ +F+ G  V +K
Subjt:  NSHRREL-KFRIGGEVYLK

Q9UR07 Transposon Tf2-11 polyprotein5.3e-3135.62Show/hide
Query:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV
        MDFI  LP++ GY+++ VVVDR SK+A  +P     T +Q A  F + +I+  G P  I+ D D IF S  WK+        +K S  + PQTDGQTER 
Subjt:  MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERV

Query:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA
        N+ +E  L C C+  P  W   I   +  YN   HS+ + TPF+IV+       P  L  + DK   N+       E   V   +KE+L     +MKK  
Subjt:  NRCLETYLHCFCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVY----GRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQA

Query:  NSHRREL-KFRIGGEVYLK
        +   +E+ +F+ G  V +K
Subjt:  NSHRREL-KFRIGGEVYLK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCATCGAAGGGTTACCGAAAGCAGGAGGATATGACAGCATCATGGTGGTCGTGGATCGGTTAAGTAAACTGGCACACTTTATACCCTTGAAGCACCCGTTCAC
TACGAAACAGGTGGCTGAAAAATTTGTGGAAGAGATCATCAGTAAGCATGGGATACCAAATTCGATTGTAACTGATCGTGACAAGATTTTTCTGAGTCATTTTTGGAAAG
AATTATTTACCGCTATGGGGACGACACTAAAAAGGAGTACGGCTTTCCATCCTCAAACCGACGGTCAGACCGAGCGGGTAAACCGCTGTCTTGAAACTTATTTGCACTGT
TTTTGTAACGAACAGCCCACTAAATGGCACAAGTGTATCCCTTGGGCGGAACTATGGTATAACACCACCTTTCACTCCTCGGCAAGAACGACACCCTTCCAAATAGTATA
TGGCAGGCCACCACCGCCGTTAGTGCGCTATGGAGACAAGAAATCCAATAACAACACTGTTGAGCAACTGTTGTTGGAAAGAGATTTGGTGATCAGTGCCTTGAAGGAGA
ACCTATTGATTGCACAAAATAGGATGAAAAAACAGGCTAATTCTCATCGTCGTGAACTGAAATTTCGGATAGGAGGTGAGGTTTATTTGAAATTGCGGCCTTACCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCATCGAAGGGTTACCGAAAGCAGGAGGATATGACAGCATCATGGTGGTCGTGGATCGGTTAAGTAAACTGGCACACTTTATACCCTTGAAGCACCCGTTCAC
TACGAAACAGGTGGCTGAAAAATTTGTGGAAGAGATCATCAGTAAGCATGGGATACCAAATTCGATTGTAACTGATCGTGACAAGATTTTTCTGAGTCATTTTTGGAAAG
AATTATTTACCGCTATGGGGACGACACTAAAAAGGAGTACGGCTTTCCATCCTCAAACCGACGGTCAGACCGAGCGGGTAAACCGCTGTCTTGAAACTTATTTGCACTGT
TTTTGTAACGAACAGCCCACTAAATGGCACAAGTGTATCCCTTGGGCGGAACTATGGTATAACACCACCTTTCACTCCTCGGCAAGAACGACACCCTTCCAAATAGTATA
TGGCAGGCCACCACCGCCGTTAGTGCGCTATGGAGACAAGAAATCCAATAACAACACTGTTGAGCAACTGTTGTTGGAAAGAGATTTGGTGATCAGTGCCTTGAAGGAGA
ACCTATTGATTGCACAAAATAGGATGAAAAAACAGGCTAATTCTCATCGTCGTGAACTGAAATTTCGGATAGGAGGTGAGGTTTATTTGAAATTGCGGCCTTACCGATAG
Protein sequenceShow/hide protein sequence
MDFIEGLPKAGGYDSIMVVVDRLSKLAHFIPLKHPFTTKQVAEKFVEEIISKHGIPNSIVTDRDKIFLSHFWKELFTAMGTTLKRSTAFHPQTDGQTERVNRCLETYLHC
FCNEQPTKWHKCIPWAELWYNTTFHSSARTTPFQIVYGRPPPPLVRYGDKKSNNNTVEQLLLERDLVISALKENLLIAQNRMKKQANSHRRELKFRIGGEVYLKLRPYR