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Cmc01g0020281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0020281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTTF-type domain-containing protein
Genome locationCMiso1.1chr01:18436676..18437158
RNA-Seq ExpressionCmc01g0020281
SyntenyCmc01g0020281
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457138.1 PREDICTED: uncharacterized protein LOC103496885 [Cucumis melo]2.9e-6080.62Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        M+AMFLVRGRKS+KSQPITNLH+YRVEVFY VID+QLQELNNR+TESSTE+LLCIACLN SNSF AF+RQKLSR  QF+ ++F AIELSMLEDQ QNYII
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
        D+RS+FVELKSIGD+AVK+VVT+R K+YPLVYRLLTLALIL +A A VERTFS  NIVKT
Subjt:  DMRSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

XP_021829887.1 uncharacterized protein LOC110770113 [Prunus avium]3.4e-4563.35Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        M+ +F   GR  +K+QPITNLH+YRV++F  VID+QL+ELN+RF E +TE+LLC+ACL+ SNSF+AFD+ KL R  QFYQ+DF   +L +LEDQL+NYI 
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
        D+ S  +F ELK I DLA K+V T +DK+YPLVY LLTLALILPVATA VER FS  NIVK
Subjt:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

XP_024155975.1 zinc finger MYM-type protein 1-like [Rosa chinensis]4.5e-4561.73Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        M+  F+ +G+  + +Q ITNLH+YRV++FYTVID QLQEL++RF E +TE+LLC++CLN  NSF+AFD++KL +  Q+Y +DF A +L +L+DQL+NYI+
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
        DMRS  EF ELK I DLA K+V T++D  YPLVY LLTLALILPVATA VER FS  NIVKT
Subjt:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

XP_028062659.1 zinc finger MYM-type protein 1-like [Camellia sinensis]6.3e-4765.82Show/hide
Query:  MFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDM-
        MF+VRGRK + +Q ITNLHYYR E+ YTV+D+Q+QELN RFTES+TE+LLC+ACLN SNSF++FDR+KL   V+FY K+F ++E  +L DQL  YIIDM 
Subjt:  MFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDM-

Query:  -RSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
          SEF  L  I DLA K++ T RDKVYPLVY LLTLALILPVAT  VER FS  NIVK
Subjt:  -RSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

XP_028117728.1 zinc finger MYM-type protein 1-like [Camellia sinensis]2.4e-4664.6Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        M  MF+ RGRK + +Q ITNLHYYR E+FYT++D+Q+ ELN RFTES+TE+LLC+ACLN SNSF++FDR+K+    +FY K+F ++EL +L DQL  YII
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DM--RSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
        DM   SEF  L  I DLA K+V T RDKVYPLVY LLTLALILPVATA VER FS+ NIVK
Subjt:  DM--RSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

TrEMBL top hitse value%identityAlignment
A0A1S3C638 uncharacterized protein LOC1034968851.4e-6080.62Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        M+AMFLVRGRKS+KSQPITNLH+YRVEVFY VID+QLQELNNR+TESSTE+LLCIACLN SNSF AF+RQKLSR  QF+ ++F AIELSMLEDQ QNYII
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
        D+RS+FVELKSIGD+AVK+VVT+R K+YPLVYRLLTLALIL +A A VERTFS  NIVKT
Subjt:  DMRSEFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

A0A2R6Q784 Zinc finger MYM-type protein4.9e-4562.11Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        MN MF+ RGR+  K+Q +TNLH+YRVE+ YTVID+Q+QELN RFTES+ E+LLC+ACL+ S+SF++FD++K+ R  + Y K+F ++EL +L DQL  YI+
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
        DMRS  +F  L  I DLA K+V T R+KVYPLVY LLTLALILPVATA VER FS  NIVK
Subjt:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

A0A5B7AXL6 Putative zinc finger MYM-type protein 1-like (Fragment)1.4e-4462.03Show/hide
Query:  MFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMR
        +F+V GR   K+  ITNLH+YRVE+FYTV+D+QLQELNNRF E +TE+L+C+ACLN S+SF+AF++Q+L RF QFY  +F A++L  LE+QL+NYIIDMR
Subjt:  MFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMR

Query:  S--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
        S  EF E+K I DLA K+V T+++ VYPL+Y LL LALILPVATA VER FS   ++K
Subjt:  S--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

A0A5B7B014 Putative zinc finger MYM-type protein 1-like1.4e-4462.03Show/hide
Query:  MFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMR
        +F+V GR   K+  ITNLH+YRVE+FYTV+D+QLQELNNRF E +TE+L+C+ACLN S+SF+AF++Q+L RF QFY  +F A++L  LE+QL+NYIIDMR
Subjt:  MFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMR

Query:  S--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
        S  EF E+K I DLA K+V T+++ VYPL+Y LL LALILPVATA VER FS   ++K
Subjt:  S--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

A0A6P5TRY7 uncharacterized protein LOC1107701131.7e-4563.35Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        M+ +F   GR  +K+QPITNLH+YRV++F  VID+QL+ELN+RF E +TE+LLC+ACL+ SNSF+AFD+ KL R  QFYQ+DF   +L +LEDQL+NYI 
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK
        D+ S  +F ELK I DLA K+V T +DK+YPLVY LLTLALILPVATA VER FS  NIVK
Subjt:  DMRS--EFVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain1.1e-3348.72Show/hide
Query:  VRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSE-
        V  R+ +K   ITNLH+Y+V+ FYTV+D+QLQE N+RF E ++E+L+C++ L+  +SF  FD+  L R  +FY  DF  +E   L+ QL+ Y+ +++++ 
Subjt:  VRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSE-

Query:  -FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
         F +LK +GDLA  +V TR+   +PLVYRLL ++LILPVATA VER FS  N VKT
Subjt:  -FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

AT2G06541.1 TTF-type zinc finger protein with HAT dimerisation domain8.2e-2142.59Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        +NAM LV+  K    Q + NL     + F    +V L E N+ F E +TE+L C+A L+ ++ F  FD+ K+ R  +FY +DF  ++   LE QL  YI 
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRSE--FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
        ++R +  F  LKS+GDLA  ++ TR+   +P VYRLL + L LP+ATA VER FS T +VKT
Subjt:  DMRSE--FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

AT2G06541.2 TTF-type zinc finger protein with HAT dimerisation domain8.2e-2142.59Show/hide
Query:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII
        +NAM LV+  K    Q + NL     + F    +V L E N+ F E +TE+L C+A L+ ++ F  FD+ K+ R  +FY +DF  ++   LE QL  YI 
Subjt:  MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYII

Query:  DMRSE--FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
        ++R +  F  LKS+GDLA  ++ TR+   +P VYRLL + L LP+ATA VER FS T +VKT
Subjt:  DMRSE--FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

AT3G29765.1 General transcription factor 2-related zinc finger protein8.0e-3247.44Show/hide
Query:  VRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSE-
        V  R+ +K   ITNLH+Y+V+ FYTV+D+QLQE N+ F E ++E+L+C++ L+  +SF  FD+  L R  +FY  DF  +E   L+ QL+ Y+ +++++ 
Subjt:  VRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSE-

Query:  -FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT
         F +L+ +GDLA  +V TR+   +PLVYRLL L+LILPVATA V R FS  N VKT
Subjt:  -FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT

AT4G09660.1 CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580)8.0e-3248.32Show/hide
Query:  VRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSE-
        V  R+ +K   ITNLH+Y+V+ FYTV+D+QLQE N+RF E ++E+L+C++ L+  +SF  FD+  L R  +FY  +F  +E   L+ QL+ Y+ +++++ 
Subjt:  VRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSE-

Query:  -FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFS
         F +LK  GDLA  +V TR+   +PLVYRLL L+LILPVATA VER FS
Subjt:  -FVELKSIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTATGTTTTTAGTTCGAGGACGAAAAAGTCAAAAATCTCAACCAATTACAAATTTGCATTATTATCGTGTTGAAGTCTTCTATACTGTCATTGATGTGCAACT
TCAAGAGTTGAATAATCGTTTTACTGAATCAAGTACTGAAATGCTTCTGTGTATAGCTTGTTTGAATTCGAGTAATTCATTTGCTGCTTTTGATAGACAAAAACTTAGTC
GATTTGTTCAGTTTTATCAAAAAGACTTTTTAGCTATTGAACTCTCTATGCTTGAGGATCAACTTCAAAATTACATTATTGATATGCGTTCAGAGTTTGTTGAACTAAAA
AGCATTGGTGATCTTGCAGTGAAAATAGTCGTTACGAGAAGAGATAAGGTCTACCCATTAGTTTATCGGTTGCTCACATTGGCGTTGATTTTACCGGTTGCAACAGCTAT
TGTAGAGAGAACATTTTCTACTACGAATATTGTGAAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTATGTTTTTAGTTCGAGGACGAAAAAGTCAAAAATCTCAACCAATTACAAATTTGCATTATTATCGTGTTGAAGTCTTCTATACTGTCATTGATGTGCAACT
TCAAGAGTTGAATAATCGTTTTACTGAATCAAGTACTGAAATGCTTCTGTGTATAGCTTGTTTGAATTCGAGTAATTCATTTGCTGCTTTTGATAGACAAAAACTTAGTC
GATTTGTTCAGTTTTATCAAAAAGACTTTTTAGCTATTGAACTCTCTATGCTTGAGGATCAACTTCAAAATTACATTATTGATATGCGTTCAGAGTTTGTTGAACTAAAA
AGCATTGGTGATCTTGCAGTGAAAATAGTCGTTACGAGAAGAGATAAGGTCTACCCATTAGTTTATCGGTTGCTCACATTGGCGTTGATTTTACCGGTTGCAACAGCTAT
TGTAGAGAGAACATTTTCTACTACGAATATTGTGAAGACTTGA
Protein sequenceShow/hide protein sequence
MNAMFLVRGRKSQKSQPITNLHYYRVEVFYTVIDVQLQELNNRFTESSTEMLLCIACLNSSNSFAAFDRQKLSRFVQFYQKDFLAIELSMLEDQLQNYIIDMRSEFVELK
SIGDLAVKIVVTRRDKVYPLVYRLLTLALILPVATAIVERTFSTTNIVKT