| GenBank top hits | e value | %identity | Alignment |
| AAO73521.1 gag-pol polyprotein [Glycine max] | 2.7e-63 | 58.22 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
MIGSLLYL ASRP+I YAVG+CA++Q++P++SHL VKRI+KYV+ TS++GI DA +K T G CF+LGNNLI WFSKKQN
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL EAEYIA GS C+QL+WMK ML+EY + + +MTLYCDNMSAI+ISKN V + RTKHIDIRHH+I +L+ +K+I+L+H+ + Q+ DIFTK LD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVC
+ FE LR LG+C
Subjt: SFFEHLRAGLGVC
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 9.1e-64 | 59.15 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
MIGSLLYL ASRP+I YAVG+CA++Q++P++SHL VKRI+KYV+ TS++GI DA +K T G CF+LGNNLI WFSKKQN
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL EAEYIA GS C+QL+WMK ML+EY + + +MTLYCDNMSAI+ISKN V + RTKHIDIRHH+I EL+ +K+I+LEH+ + Q+ DIFTK LD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVC
FE LR LG+C
Subjt: SFFEHLRAGLGVC
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| KAA0034956.1 F5J5.1 [Cucumis melo var. makuwa] | 9.1e-64 | 64.93 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
+I SLLYL ASRP+IAYAVGICAQFQSDP+ SHL VKRIIKYVH T++FGI DA + ++ T CFFLG WFSKKQ
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL VE EYIA GSGCTQLIWMK ML EY I + +MTLYCDNMSAIDISK V + +TKHIDIRHHFI ELI+ KII+L+H+RS QL DIFTKPLD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLG
+ FEHLRAGLG
Subjt: SFFEHLRAGLG
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| KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.3e-72 | 66.36 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
++GSLLYL ASRPNIAY VGICA +Q+DP+++HL AVKRI+KYVH TS+FG+ DA +K T G CFFLGNNLI W SKKQN
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL EAEYIA GSGCTQLIWMK ML EY + MTLYCDN SAIDISKN V + RTKHIDIRHHFI EL+++K+I L+HIRSNLQL DIFTKPLD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVCK
S FE+LRAGLGVC+
Subjt: SFFEHLRAGLGVCK
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| TYK21311.1 F5J5.1 [Cucumis melo var. makuwa] | 1.4e-64 | 64.65 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
+I SLLYL ASRP+IAYAVGICAQFQSDP+ SHL VKRIIKYVH T++FGI DA + ++ T CFFLG WFSKKQ
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL VE EYIA GSGCTQLIWMK ML EY I + +MTLYCDNMSAIDISK V + +TKHIDIRHHFI ELI+ KII+L+H+RS QL DIFTKPLD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVCKF
+ FEHLRAGLGV F
Subjt: SFFEHLRAGLGVCKF
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| TrEMBL top hits | e value | %identity | Alignment |
| A0A5A7SYI8 F5J5.1 | 4.4e-64 | 64.93 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
+I SLLYL ASRP+IAYAVGICAQFQSDP+ SHL VKRIIKYVH T++FGI DA + ++ T CFFLG WFSKKQ
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL VE EYIA GSGCTQLIWMK ML EY I + +MTLYCDNMSAIDISK V + +TKHIDIRHHFI ELI+ KII+L+H+RS QL DIFTKPLD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLG
+ FEHLRAGLG
Subjt: SFFEHLRAGLG
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| A0A5D3DCC3 F5J5.1 | 6.8e-65 | 64.65 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
+I SLLYL ASRP+IAYAVGICAQFQSDP+ SHL VKRIIKYVH T++FGI DA + ++ T CFFLG WFSKKQ
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL VE EYIA GSGCTQLIWMK ML EY I + +MTLYCDNMSAIDISK V + +TKHIDIRHHFI ELI+ KII+L+H+RS QL DIFTKPLD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVCKF
+ FEHLRAGLGV F
Subjt: SFFEHLRAGLGVCKF
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| A0A5D3DLL1 Gag-pol polyprotein | 2.6e-72 | 66.36 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
++GSLLYL ASRPNIAY VGICA +Q+DP+++HL AVKRI+KYVH TS+FG+ DA +K T G CFFLGNNLI W SKKQN
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL EAEYIA GSGCTQLIWMK ML EY + MTLYCDN SAIDISKN V + RTKHIDIRHHFI EL+++K+I L+HIRSNLQL DIFTKPLD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVCK
S FE+LRAGLGVC+
Subjt: SFFEHLRAGLGVCK
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| Q84VH6 Gag-pol polyprotein | 4.4e-64 | 59.15 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
MIGSLLYL ASRP+I YAVG+CA++Q++P++SHL VKRI+KYV+ TS++GI DA +K T G CF+LGNNLI WFSKKQN
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL EAEYIA GS C+QL+WMK ML+EY + + +MTLYCDNMSAI+ISKN V + RTKHIDIRHH+I EL+ +K+I+LEH+ + Q+ DIFTK LD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVC
FE LR LG+C
Subjt: SFFEHLRAGLGVC
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| Q84VI4 Gag-pol polyprotein | 1.3e-63 | 58.22 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
MIGSLLYL ASRP+I YAVG+CA++Q++P++SHL VKRI+KYV+ TS++GI DA +K T G CF+LGNNLI WFSKKQN
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI------------GIDAQMI-----KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
CVSL EAEYIA GS C+QL+WMK ML+EY + + +MTLYCDNMSAI+ISKN V + RTKHIDIRHH+I +L+ +K+I+L+H+ + Q+ DIFTK LD
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDT
Query: SFFEHLRAGLGVC
+ FE LR LG+C
Subjt: SFFEHLRAGLGVC
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| SwissProt top hits | e value | %identity | Alignment |
| P04146 Copia protein | 4.0e-22 | 31.34 | Show/hide |
Query: MIGSLLYLK-ASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI-------------------GIDAQMIKKITLGRCFFLGN-NLIPWFS
+IG L+Y+ +RP++ AV I +++ S +KR+++Y+ T + + +++ +K T G F + + NLI W +
Subjt: MIGSLLYLK-ASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGI-------------------GIDAQMIKKITLGRCFFLGN-NLIPWFS
Query: KKQNCVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIH-RGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFT
K+QN V+ EAEY+A+ + +W+K +L I + +Y DN I I+ N + R KHIDI++HF E ++ +I LE+I + QL DIFT
Subjt: KKQNCVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIH-RGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFT
Query: KPLDTSFFEHLRAGLGV
KPL + F LR LG+
Subjt: KPLDTSFFEHLRAGLGV
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| P0CV72 Secreted RxLR effector protein 161 | 3.8e-12 | 30.16 | Show/hide |
Query: IGSLLYLK-ASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGIGI----DAQMI-------------KKITLGRCFFLGNNLIPWFSKKQN
+G+++YL +RP++A AVG+ +QF SDP +H A+KR+++Y+ T +G+ A+++ ++ T G F L + W SKKQ
Subjt: IGSLLYLK-ASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGIGI----DAQMI-------------KKITLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKI
V+L E EY+A+ + +W+ +
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-30 | 36.49 | Show/hide |
Query: IGSLLY-LKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSE----FGIG-------IDAQMI-----KKITLGRCFFLGNNLIPWFSKKQNC
+GSL+Y + +RP+IA+AVG+ ++F +P H AVK I++Y+ T+ FG DA M +K + G F I W SK Q C
Subjt: IGSLLY-LKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSE----FGIG-------IDAQMI-----KKITLGRCFFLGNNLIPWFSKKQNC
Query: VSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDTS
V+L EAEYIA ++IW+K LQE +H+ +YCD+ SAID+SKN + + RTKHID+R+H+I E++ ++ + + I +N D+ TK + +
Subjt: VSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLDTS
Query: FFEHLRAGLGV
FE + +G+
Subjt: FFEHLRAGLGV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.9e-24 | 32.56 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGIGIDAQMIKKI-----------------TLGRCFFLGNNLIPWFSKKQN
++GSL YL +RP+I+YAV +QF P HL A+KRI++Y+ T GI + + T G +LG++ I W SKKQ
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGIGIDAQMIKKI-----------------TLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIH-RGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLD
V EAEY +V + +++ W+ +L E I +YCDN+ A + N V + R KHI I +HFI ++ + + H+ ++ QL D TKPL
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIH-RGIMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLD
Query: TSFFEHLRAGLGVCK
+ F++ + +GV +
Subjt: TSFFEHLRAGLGVCK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.2e-23 | 32.09 | Show/hide |
Query: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGIGI------------DAQMIKKI-----TLGRCFFLGNNLIPWFSKKQN
++GSL YL +RP+++YAV +Q+ P H A+KR+++Y+ T + GI + DA T G +LG++ I W SKKQ
Subjt: MIGSLLYLKASRPNIAYAVGICAQFQSDPQVSHLAAVKRIIKYVHETSEFGIGI------------DAQMIKKI-----TLGRCFFLGNNLIPWFSKKQN
Query: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRG-IMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLD
V EAEY +V + ++L W+ +L E I +YCDN+ A + N V + R KHI + +HFI ++ + + H+ ++ QL D TKPL
Subjt: CVSLCIVEAEYIAVGSGCTQLIWMKIMLQEYCIHRG-IMTLYCDNMSAIDISKNLVLYCRTKHIDIRHHFIMELIKEKIISLEHIRSNLQLTDIFTKPLD
Query: TSFFEHLRAGLGVCK
F++ +GV K
Subjt: TSFFEHLRAGLGVCK
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