CuGenDBv2

Gene ID	Cmc01g0020341
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:18519109..18521283
RNA-Seq Expression	Cmc01g0020341
Synteny	Cmc01g0020341
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.37

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKIIAAQ +DPYLAEKRR+VET QGE FSIS+DDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSI+SDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

KAA0032541.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.06

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Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHY+FVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLY EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKREVADFVSRCLVCQQVK+PRQHPAGL+Q LSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSIISDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

KAA0045309.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.65

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Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPP+EVDFAIELEPGTAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV+SFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVAD+LSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYLAEKRRMVETGQGEDFSIS+DDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLY+TEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSIISDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

KAA0060745.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.92

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Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV APVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYLAEKRRMVETGQGEDFSIS DDGLMFEGRLCVPED AVKTELLTEAHSS FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSIISDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.37

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKIIAAQ +DPYLAEKRR+VET QGE FSIS+DDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSI+SDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

93.37

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKIIAAQ +DPYLAEKRR+VET QGE FSIS+DDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSI+SDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

A0A5A7SSL3 Reverse transcriptase

0.0e+00

94.06

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Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHY+FVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLY EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKREVADFVSRCLVCQQVK+PRQHPAGL+Q LSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSIISDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

A0A5A7TVN9 Reverse transcriptase

0.0e+00

93.65

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPP+EVDFAIELEPGTAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV+SFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVAD+LSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYLAEKRRMVETGQGEDFSIS+DDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLY+TEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSIISDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

A0A5A7V4E4 Reverse transcriptase

0.0e+00

93.92

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV APVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYLAEKRRMVETGQGEDFSIS DDGLMFEGRLCVPED AVKTELLTEAHSS FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSIISDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

A0A5D3BTN0 Reverse transcriptase

0.0e+00

93.37

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Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFM

Query:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNR                                 VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  DLMNR---------------------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKIIAAQ +DPYLAEKRR+VET QGE FSIS+DDGLMFEGRLCVPED AVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV

Query:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
        YWWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR
Subjt:  YWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIISDRDARFTSKFWKGL
        LHGVPVSI+SDRDARFTSKFWKGL
Subjt:  LHGVPVSIISDRDARFTSKFWKGL

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.8e-99

30.69

Show/hide

Query:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP  F   +N              
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------

Query:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
                            VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK
        PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  AN +ADALSR       ++ +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW
         + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + 
Subjt:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW

Query:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH
        W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   
Subjt:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH

Query:  GVPVSIISDRDARFTSKFWK
        G P  II+D D  FTS+ WK
Subjt:  GVPVSIISDRDARFTSKFWK

P0CT35 Transposon Tf2-2 polyprotein

3.8e-99

30.69

Show/hide

Query:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP  F   +N              
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------

Query:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
                            VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK
        PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  AN +ADALSR       ++ +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW
         + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + 
Subjt:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW

Query:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH
        W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   
Subjt:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH

Query:  GVPVSIISDRDARFTSKFWK
        G P  II+D D  FTS+ WK
Subjt:  GVPVSIISDRDARFTSKFWK

P0CT36 Transposon Tf2-3 polyprotein

3.8e-99

30.69

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Query:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP  F   +N              
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------

Query:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
                            VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK
        PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  AN +ADALSR       ++ +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW
         + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + 
Subjt:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW

Query:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH
        W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   
Subjt:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH

Query:  GVPVSIISDRDARFTSKFWK
        G P  II+D D  FTS+ WK
Subjt:  GVPVSIISDRDARFTSKFWK

P0CT37 Transposon Tf2-4 polyprotein

3.8e-99

30.69

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Query:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP  F   +N              
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------

Query:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
                            VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK
        PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  AN +ADALSR       ++ +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW
         + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + 
Subjt:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW

Query:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH
        W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   
Subjt:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH

Query:  GVPVSIISDRDARFTSKFWK
        G P  II+D D  FTS+ WK
Subjt:  GVPVSIISDRDARFTSKFWK

P0CT41 Transposon Tf2-12 polyprotein

3.8e-99

30.69

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Query:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP  F   +N              
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNR-------------

Query:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
                            VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  --------------------VLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK
        PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  AN +ADALSR       ++ +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW
         + Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   +  + +P D  +   ++ + H     +HPG   +   +   + 
Subjt:  QLAQLSVQPTLRQKIIAAQWNDPYLA-----EKRRMVETGQGEDFSISADDGLMFEGR--LCVPEDIAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW

Query:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH
        W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   
Subjt:  WRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLH

Query:  GVPVSIISDRDARFTSKFWK
        G P  II+D D  FTS+ WK
Subjt:  GVPVSIISDRDARFTSKFWK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.3e-26

42.52

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Query:  MDLMNRVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF
        M+ +  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +  
Subjt:  MDLMNRVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF

Query:  VWSPACERSFQELKQKLVTAPVLTVPD
         W+     +F+ LK  + T PVL +PD
Subjt:  VWSPACERSFQELKQKLVTAPVLTVPD

Sequences

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CDS sequence

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ATGAAGGCTAGTAAACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTA
CCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAA
TGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTATTGTTCGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACGGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACG
AGTTCGTGGTGATGTCTTTCGGCTTGACTAACGCTCCTACAGTGTTCATGGATTTGATGAACAGGGTTTTGGAGACTCTTCGAGCCAACAAGCTGTATGCCAAGTTCTCC
AAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCAGTGACCAATTGGCCTCGACC
GTCCACGGTTAGTGAAATTCGAAGTTTTCTAGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGG
GAACCCCTTTTGTATGGAGCCCAGCATGCGAGCGTAGCTTTCAGGAGCTTAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTG
ATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAACAGAACTACCCTAC
CCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTACTTCT
TCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAAGTAAAGCAAATGTAGTGGCTGACGCG
CTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTGGGTGAGGTTACCGCACA
GTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGTGGAATGATCCTTACTTGGCCGAGAAGCGTCGTATGGTGGAGACAGGGCAAGGCG
AAGACTTCTCCATATCCGCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACATCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCTCCG
TTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGTTTGGTGTG
CCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGAGACTGCCCA
AGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGTTA
TATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCTCGCTTCACATCGAAGTTCTGGAAAGGACTTTAA

mRNA sequence

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Protein sequence

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MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVLETLRANKLYAKFS
KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFV
IYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
LSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRLCVPEDIAVKTELLTEAHSSP
FTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQL
YMTEIVRLHGVPVSIISDRDARFTSKFWKGL

Cmc01g0020341 (gene) of Melon (Charmono) v1.1 genome