| GenBank top hits | e value | %identity | Alignment |
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| GAU21337.1 hypothetical protein TSUD_189240 [Trifolium subterraneum] | 3.8e-83 | 79.03 | Show/hide |
Query: EDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLI
ED +L EALSS+D +LWQ+AINDEM SLESN+TWHLVDLPP CK IGCKW+L+KK KPDG+++KYKARLVAKGFRQREN+DFF+TFS VTRITSIRVLI
Subjt: EDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLI
Query: SIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
SIA L NL++HQMDVKT FLNGDLEEEIYMEQPEGF++ QE+KVCKLDKSLYGLKQAPK+WH+KFDNL++S GF++NES+KCIYY
Subjt: SIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 7.6e-100 | 95.79 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
MYNIEDQKDL +ALSSVDVNLWQKAINDEM SLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQ ENMDFF+TFSSVTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
RVLISI +LNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWH+KFDNLLMSKGFKVNESNKCIYY
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| KAA0046026.1 putative Polyprotein [Cucumis melo var. makuwa] | 2.9e-83 | 86.67 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
+YN+ED KDL EALSSVD NLWQ+AINDEM SLESNRTWHLVDLPP CKAIGCKWVLRKK KPDGS+DKYKARLVAKGFRQREN+DFF+TFS VTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFK
RVLISI LNNLLIHQMDVKT FLN DLEEEIYMEQ EGFIV QESKVCKLDKSLYGLKQA K+WH+KFDNL MSKGFK
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFK
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| KAA0058878.1 putative polyprotein [Cucumis melo var. makuwa] | 4.5e-84 | 82.63 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
MYN+ED KDL EALSS+DVNLWQ+AINDEM SLESNRTWHLVDLP CK IG KW+LRKK K DGS+DKYKARLVAKGFRQR+N++FF+TFS VTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
RVLISI+ LNNLLIHQMDVKT FLNGDLEEEIYMEQPE FIV QE KVCKLDKSLYGL+QAPK+ H+KFD LLMSKGFKVNES+KC+YY
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| TYK22685.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 1.4e-101 | 97.89 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
MYNIEDQKDL EALSSVDVNLWQKAINDEM SLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFF+TFSSVTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWH+KFDNLLMSKGFKVNESNKCIYY
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z6MWZ1 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.8e-83 | 79.03 | Show/hide |
Query: EDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLI
ED +L EALSS+D +LWQ+AINDEM SLESN+TWHLVDLPP CK IGCKW+L+KK KPDG+++KYKARLVAKGFRQREN+DFF+TFS VTRITSIRVLI
Subjt: EDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLI
Query: SIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
SIA L NL++HQMDVKT FLNGDLEEEIYMEQPEGF++ QE+KVCKLDKSLYGLKQAPK+WH+KFDNL++S GF++NES+KCIYY
Subjt: SIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass | 3.7e-100 | 95.79 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
MYNIEDQKDL +ALSSVDVNLWQKAINDEM SLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQ ENMDFF+TFSSVTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
RVLISI +LNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWH+KFDNLLMSKGFKVNESNKCIYY
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| A0A5A7TV55 Putative Polyprotein | 1.4e-83 | 86.67 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
+YN+ED KDL EALSSVD NLWQ+AINDEM SLESNRTWHLVDLPP CKAIGCKWVLRKK KPDGS+DKYKARLVAKGFRQREN+DFF+TFS VTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFK
RVLISI LNNLLIHQMDVKT FLN DLEEEIYMEQ EGFIV QESKVCKLDKSLYGLKQA K+WH+KFDNL MSKGFK
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFK
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| A0A5D3DGJ1 Retrotransposon protein, putative, Ty1-copia sub-class | 6.7e-102 | 97.89 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
MYNIEDQKDL EALSSVDVNLWQKAINDEM SLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFF+TFSSVTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWH+KFDNLLMSKGFKVNESNKCIYY
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| A0A5D3DJH9 Putative polyprotein | 2.2e-84 | 82.63 | Show/hide |
Query: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
MYN+ED KDL EALSS+DVNLWQ+AINDEM SLESNRTWHLVDLP CK IG KW+LRKK K DGS+DKYKARLVAKGFRQR+N++FF+TFS VTRITSI
Subjt: MYNIEDQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSI
Query: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
RVLISI+ LNNLLIHQMDVKT FLNGDLEEEIYMEQPE FIV QE KVCKLDKSLYGL+QAPK+ H+KFD LLMSKGFKVNES+KC+YY
Subjt: RVLISIAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.2e-34 | 41.86 | Show/hide |
Query: DVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIAVLNNLLIHQM
D + W++AIN E+ + + N TW + P + +WV K+ G+ +YKARLVA+GF Q+ +D+ TF+ V RI+S R ++S+ + NL +HQM
Subjt: DVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIAVLNNLLIHQM
Query: DVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIY
DVKT FLNG L+EEIYM P+G + VCKL+K++YGLKQA + W + F+ L F + ++CIY
Subjt: DVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-45 | 48.65 | Show/hide |
Query: DQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLIS
+ + L E LS + N KA+ +EM SL+ N T+ LV+LP + + CKWV + K D + +YKARLV KGF Q++ +DF FS V ++TSIR ++S
Subjt: DQKDLIEALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLIS
Query: IAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
+A +L + Q+DVKT FL+GDLEEEIYMEQPEGF V ++ VCKL+KSLYGLKQAP++W+ KFD+ + S+ + S+ C+Y+
Subjt: IAVLNNLLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIYY
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.1e-16 | 44.19 | Show/hide |
Query: WQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIA
W +A+ +E+ +L N+TW LV P +GCKWV + K DG++D+ KARLVAKGF Q E + F T+S V R +IR ++++A
Subjt: WQKAINDEMGSLESNRTWHLVDLPPPCKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.6e-38 | 42.13 | Show/hide |
Query: ALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPP-CKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIAVLNN
A+ ++ W+ A+ E+ + N TW LV PP +GC+W+ KK+ DGS+++YKARLVAKG+ QR +D+ TFS V + TSIR+++ +AV +
Subjt: ALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPP-CKAIGCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIAVLNN
Query: LLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIY
I Q+DV FL G L +++YM QP GFI + + + VCKL K+LYGLKQAP+ W+ + N L++ GF + S+ ++
Subjt: LLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.0e-38 | 42.13 | Show/hide |
Query: ALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAI-GCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIAVLNN
A+ ++ + W++A+ E+ + N TW LV PPP I GC+W+ KKF DGS+++YKARLVAKG+ QR +D+ TFS V + TSIR+++ +AV +
Subjt: ALSSVDVNLWQKAINDEMGSLESNRTWHLVDLPPPCKAI-GCKWVLRKKFKPDGSIDKYKARLVAKGFRQRENMDFFNTFSSVTRITSIRVLISIAVLNN
Query: LLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIY
I Q+DV FL G L +E+YM QP GF+ + + VC+L K++YGLKQAP+ W+ + L++ GF + S+ ++
Subjt: LLIHQMDVKTTFLNGDLEEEIYMEQPEGFIVQAQESKVCKLDKSLYGLKQAPKEWHQKFDNLLMSKGFKVNESNKCIY
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