| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0038926.1 integrase [Cucumis melo var. makuwa] | 1.8e-58 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| KAA0039947.1 integrase [Cucumis melo var. makuwa] | 1.8e-58 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| KAA0060377.1 integrase [Cucumis melo var. makuwa] | 1.8e-58 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| TYJ95504.1 integrase [Cucumis melo var. makuwa] | 1.8e-58 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| TYK30104.1 integrase [Cucumis melo var. makuwa] | 1.8e-58 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UZJ8 Integrase | 8.8e-59 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| A0A5D3BQ81 Integrase | 8.8e-59 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| A0A5D3CLV1 Integrase | 8.8e-59 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
|
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| A0A5D3CXM6 Integrase | 8.8e-59 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
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| A0A5D3E3T2 Integrase | 8.8e-59 | 87.97 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEEIFA VTRIETIRLILSLA+QNGWKVYQMDVKS FLNG LKEEIFVAQPLGYV+ GEEEKVYKL KALYGLKQA RAWYS I FLKTGF+RCPY
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
+ ALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-19 | 42.75 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DYEE FA V RI + R ILSL Q KV+QMDVK+ FLNG LKEEI++ P G + + V KL KA+YGLKQA R W+ + F
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYV-KEDKYGKFLIVSLYVDDLLFTGND
D +Y+ + + + V LYVDD++ D
Subjt: DDALYV-KEDKYGKFLIVSLYVDDLLFTGND
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-23 | 42.54 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+D++EIF+ V ++ +IR ILSLA+ +V Q+DVK+ FL+G L+EEI++ QP G+ G++ V KL K+LYGLKQA R WY + +
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLM
D +Y K F+I+ LYVDD+L G DK L+
Subjt: DDALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLM
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| Q12088 Transposon Ty1-LR1 Gag-Pol polyprotein | 3.0e-08 | 30.63 | Show/hide |
Query: LSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPYDDALYVKEDKYGKFLIVSL
LSLAS N + + Q+D+ S +L +KEE+++ P G +K+ +L K+LYGLKQ+ WY I +K +C ++ + + L
Subjt: LSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPYDDALYVKEDKYGKFLIVSL
Query: YVDDLLFTGND
+VDD++ D
Subjt: YVDDLLFTGND
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-21 | 40.74 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DY E F+ V + +IR++L +A W + Q+DV + FL G L ++++++QP G++ V KL KALYGLKQA RAWY + L GF
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSL-YVDDLLFTGNDKFLM
D +L+V + GK ++ L YVDD+L TGND L+
Subjt: DDALYVKEDKYGKFLIVSL-YVDDLLFTGNDKFLM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-21 | 40.74 | Show/hide |
Query: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
+DY E F+ V + +IR++L +A W + Q+DV + FL G L +E++++QP G+V + V +L KA+YGLKQA RAWY + L GF
Subjt: MDYEEIFALVTRIETIRLILSLASQNGWKVYQMDVKSVFLNGRLKEEIFVAQPLGYVKTGEEEKVYKLIKALYGLKQALRAWYSCIGGIFLKTGFQRCPY
Query: DDALYVKEDKYGKFLIVSL-YVDDLLFTGNDKFLM
D +L+V + G+ +I L YVDD+L TGND L+
Subjt: DDALYVKEDKYGKFLIVSL-YVDDLLFTGNDKFLM
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