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Cmc01g0021121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0021121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein isoform X1
Genome locationCMiso1.1chr01:19654419..19655678
RNA-Seq ExpressionCmc01g0021121
SyntenyCmc01g0021121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051127.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa]7.9e-25100Show/hide
Query:  MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN
        MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN
Subjt:  MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN
TrEMBL top hitse value%identityAlignment
A0A5A7U9P1 Transposon Ty3-I Gag-Pol polyprotein isoform X13.8e-25100Show/hide
Query:  MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN
        MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN
Subjt:  MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAATACGATCCAAGAAAGCAACAAAAAAAGGGTTGTGGGGAACTTCCTTGAACAAGGCATATGCACCGCATACTACTACAAACCAGCCACCAGCAGCAAAAGA
AAAAGATCAAAAGAAAGCTGAAGAAAGAAGTGAAAAGAAAGAAGATCTTGATCCCAAAAAGAAGGCTCGAAATCCATACAACTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAAAAACTTCTTCAATTACATGAACACTTTCGAGCACAAAAAGGTACATCTGGTAGCTTTAAAATTAAAAGGTGGTGCATTGGCATGGTGGGACCAATTGGAAGTTA
ATCGGCGAAGGCAAGGAAAGAGGCTGATTCAATCTGGGAGAACATGAAGAAGTTGATGAAAGAACAATTTCTACTGCCAAACTATGAGCAAACATTGAATAATCAGTATC
AAAATCATAGACAAGGGCTAAAAACAGGGACCGATTATATTGAAGAATTCCACCGGTTGGGTGCAAGAACAAACTCGATGGAGAGTGAGCAACGTTTAATAGCAAGATCT
GTGGGAGCCCTACACATGGACATCAAGGAAACGTGGAAGAAATGAATGAAATACGATCCAAGAAAGCAACAAAAAAAGGGTTGTGGGGAACTTCCTTGAACAAGGCATAT
GCACCGCATACTACTACAAACCAGCCACCAGCAGCAAAAGAAAAAGATCAAAAGAAAGCTGAAGAAAGAAGTGAAAAGAAAGAAGATCTTGATCCCAAAAAGAAGGCTCG
AAATCCATACAACTGACCTCCCTTGGAAACTGTGTTTGGTGCAGTCAGAATGATCATATGTCCGAAGCTTGTCCTTAGTGGAAAACAGTCGCTTTACTAGATGAAGAGGA
AGATTCTTGTGAGGAAGAGCCAAAACCATAGAGGAAGAAGCCACATTACTTGAACTGATGAAGGAGAAGCTATCTTGCATTCTTCAAAGGGTTTTTGTCTTAATTTGATA
GAACAGGATACCATCTCAAAACCAATTGGCAATGGGAGGAGTGGTGCATCTATTTTTATAAAGAATGTGAGTCCCTCACATTGGAAAAAAAACGTGAGTCTCCTTGATTT
TTTCAATGTGGGATTTTCAACATCTTAACATGCTCCTCAAGATGGTGTCTCTCTTGGGTTCACCAATCTTGGTCGGATCTCTTTTTTTTTTATTGGACCGAATACCTAAA
CTTAAATTTGAGAGTTAAATTGTTTTTTCCTTATTATTAAATATATGTAATGTTGGTCTTCTTATATAGGAGAAAGACCTTTTACAAAAGAGGAAAGAATAAAAGCAATA
AATGATAAATATCTGAACAATAATATGTATATATAAACATAGAAATTCCAACGGTCT
Protein sequenceShow/hide protein sequence
MNEIRSKKATKKGLWGTSLNKAYAPHTTTNQPPAAKEKDQKKAEERSEKKEDLDPKKKARNPYN