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Cmc01g0022011 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0022011
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionEnzymatic polyprotein
Genome locationCMiso1.1chr01:20777794..20778255
RNA-Seq ExpressionCmc01g0022011
SyntenyCmc01g0022011
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032922.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-7792.81Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVK+ KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

KAA0040831.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.1e-8096.08Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKE QIPTKARPIQMNK+LVKVYKDEITYLLKRGL SPSKS WSCSAFYVNNQ EKERGIQRLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]6.6e-7893.46Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVKV KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]6.6e-7893.46Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVKV KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]6.6e-7893.46Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVKV KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

TrEMBL top hitse value%identityAlignment
A0A5A7SP41 Enzymatic polyprotein5.4e-7892.81Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVK+ KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

A0A5A7TGN9 Enzymatic polyprotein2.0e-8096.08Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKE QIPTKARPIQMNK+LVKVYKDEITYLLKRGL SPSKS WSCSAFYVNNQ EKERGIQRLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

A0A5A7UR29 Enzymatic polyprotein3.2e-7893.46Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVKV KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

A0A5A7UX67 Enzymatic polyprotein3.2e-7893.46Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVKV KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

A0A5D3BEY3 Enzymatic polyprotein3.2e-7893.46Show/hide
Query:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI
        MVTLPYEDGFKEAQIPTKARPIQMNKDLVKV KDEIT LL +GL SPSKSPWSCSAFYVNNQAEKERG+ RLVINYKPLNKVLKWIRY IPNRQDLLKRI
Subjt:  MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRI

Query:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        TLAKVFSKFDMKSGFWQIQIHP+DRYKTAFNVPFGQ+QWNVMPFGLKNAPSEF
Subjt:  TLAKVFSKFDMKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

SwissProt top hitse value%identityAlignment
P03554 Enzymatic polyprotein2.9e-2846.32Show/hide
Query:  KARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGFWQ
        K +P++ +    + +  +I  LL   +  PSKSP    AF VNN+AEK RG +R+V+NYK +NK      Y +PN+ +LL  I   K+FS FD KSGFWQ
Subjt:  KARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGFWQ

Query:  IQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        + +    R  TAF  P G Y+WNV+PFGLK APS F
Subjt:  IQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

P03555 Enzymatic polyprotein3.8e-2846.32Show/hide
Query:  KARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGFWQ
        K +P++ +    + +  +I  LL   +  PSKSP    AF VNN+AEK RG +R+V+NYK +NK      Y +PN+ +LL  I   K+FS FD KSGFWQ
Subjt:  KARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGFWQ

Query:  IQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        + +    R  TAF  P G Y+WNV+PFGLK APS F
Subjt:  IQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

Q02964 Enzymatic polyprotein3.8e-2846.32Show/hide
Query:  KARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGFWQ
        K +P++ +    + +  +I  LL   +  PSKSP    AF VNN+AEK RG +R+V+NYK +NK      Y +PN+ +LL  I   K+FS FD KSGFWQ
Subjt:  KARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGFWQ

Query:  IQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        + +    R  TAF  P G Y+WNV+PFGLK APS F
Subjt:  IQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

Q6XKE6 Genome polyprotein5.1e-3350.72Show/hide
Query:  PTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGF
        PTKA    MN + +++   E   L +  L  PS S W+C AFYVN ++E+ RG  RLVINY+PLN  L+  ++ IPN+  L   ++ AK+FSKFD+KSGF
Subjt:  PTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGF

Query:  WQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        WQ+ IHP +R KT F +P   +QW VMPFGLK APS F
Subjt:  WQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

Q91DM0 Genome polyprotein6.7e-3350.72Show/hide
Query:  PTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGF
        PTKA    MN + +++   E   L +  L  PS S W+C AFYVN ++E+ RG  RLVINY+PLN  L+  ++ IPN+  L   ++ AK+FSKFD+KSGF
Subjt:  PTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFDMKSGF

Query:  WQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF
        WQ+ IHP +R KT F +P   +QW VMPFGLK APS F
Subjt:  WQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACACTACCATACGAAGACGGATTCAAAGAGGCCCAGATTCCTACAAAGGCTCGCCCCATTCAAATGAATAAAGATCTGGTCAAAGTCTATAAAGACGAAATCAC
ATATCTTCTCAAAAGGGGATTAAGAAGCCCATCTAAAAGCCCGTGGTCGTGCTCGGCCTTTTACGTCAACAACCAGGCCGAAAAGGAACGAGGCATCCAAAGGCTTGTTA
TCAATTACAAGCCTCTTAACAAGGTTCTCAAATGGATTAGGTACCTAATTCCTAATCGTCAAGACTTGCTAAAAAGGATTACTTTAGCAAAGGTTTTCTCAAAATTTGAC
ATGAAGTCTGGATTTTGGCAAATCCAAATCCATCCTGCTGACCGTTATAAGACAGCCTTCAATGTTCCATTTGGACAATATCAATGGAATGTCATGCCGTTCGGATTAAA
GAACGCCCCATCCGAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAACACTACCATACGAAGACGGATTCAAAGAGGCCCAGATTCCTACAAAGGCTCGCCCCATTCAAATGAATAAAGATCTGGTCAAAGTCTATAAAGACGAAATCAC
ATATCTTCTCAAAAGGGGATTAAGAAGCCCATCTAAAAGCCCGTGGTCGTGCTCGGCCTTTTACGTCAACAACCAGGCCGAAAAGGAACGAGGCATCCAAAGGCTTGTTA
TCAATTACAAGCCTCTTAACAAGGTTCTCAAATGGATTAGGTACCTAATTCCTAATCGTCAAGACTTGCTAAAAAGGATTACTTTAGCAAAGGTTTTCTCAAAATTTGAC
ATGAAGTCTGGATTTTGGCAAATCCAAATCCATCCTGCTGACCGTTATAAGACAGCCTTCAATGTTCCATTTGGACAATATCAATGGAATGTCATGCCGTTCGGATTAAA
GAACGCCCCATCCGAATTCTAG
Protein sequenceShow/hide protein sequence
MVTLPYEDGFKEAQIPTKARPIQMNKDLVKVYKDEITYLLKRGLRSPSKSPWSCSAFYVNNQAEKERGIQRLVINYKPLNKVLKWIRYLIPNRQDLLKRITLAKVFSKFD
MKSGFWQIQIHPADRYKTAFNVPFGQYQWNVMPFGLKNAPSEF