| GenBank top hits | e value | %identity | Alignment |
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| KAA0032291.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-110 | 89.38 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNIP+ASAVGSLMY MLCTRPDICYSV IVSRYQSN GRDHW AVKNILKYLR+TKDYMLVYGSKDLILTG+TDSDFQ DKDARKSTSGS+FTLNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI STMEAEYVA CEAAKEAVWLKKF TDLEVVPNMHL ITLYCDNSGAVANSREPRSHKRGKHIERKYHL+REI+H+GDVIVTKIS EQN
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPFTKAL AKVFES LH LGL GL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| KAA0041461.1 gag/pol protein [Cucumis melo var. makuwa] | 7.4e-110 | 88.94 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNI YASAVGSLMY MLCTRP+ICYSVEIVSRYQSN GRDHW VKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKS S S+FTLN GA
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI+DSTMEAEYVA CEAAKEAVWLKKF DLEVVPNMHL ITLYCDN+GAVANSREPRSHKRGKHIE+KYHL+REIVHRGDV VTKIS EQN
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+AD FTKALTAKVFES LHGLGLRGL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| KAA0051190.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-111 | 89.38 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
M NIPYASAVGSLMY MLCTRPDICYSV IVSRYQ LGRDHWT VKNILKYLRRTKDYM VYGSKDLILTGYT+SDFQTDKDARKST GS+FTLNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI DSTMEAEYVA CEAAKE VWLKKF TDLEVV NMHLPITLYCDNSGAVANSREP+SHKRGKHIERKYHL+REIVH+GDVI TKIS EQN
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPFTKALTAKVFES LHGLGLR L
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-109 | 86.73 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNIPYA A+GSLMY MLC RPDICYSV IVS YQSN GRDHWT VKNI+KYLRRTKDYM VYGSKDLILT YTDSDFQTDKDARKSTSGS+F LNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI+DSTME +YVA CEAAKEAVWLKKF TDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHL+R+IVHRGDV VTKIS E+N
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPF KALTAK+FES LHGLGLRGL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| TYK23767.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-109 | 86.73 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNIPYA A+GSLMY MLC RPDICYSV IVS YQSN GRDHWT VKNI+KYLRRTKDYM VYGSKDLILT YTDSDFQTDKDARKSTSGS+F LNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI+DSTME +YVA CEAAKEAVWLKKF TDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHL+R+IVHRGDV VTKIS E+N
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPF KALTAK+FES LHGLGLRGL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRW5 Gag/pol protein | 5.5e-111 | 89.38 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNIP+ASAVGSLMY MLCTRPDICYSV IVSRYQSN GRDHW AVKNILKYLR+TKDYMLVYGSKDLILTG+TDSDFQ DKDARKSTSGS+FTLNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI STMEAEYVA CEAAKEAVWLKKF TDLEVVPNMHL ITLYCDNSGAVANSREPRSHKRGKHIERKYHL+REI+H+GDVIVTKIS EQN
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPFTKAL AKVFES LH LGL GL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| A0A5A7TIH7 Gag/pol protein | 3.6e-110 | 88.94 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNI YASAVGSLMY MLCTRP+ICYSVEIVSRYQSN GRDHW VKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKS S S+FTLN GA
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI+DSTMEAEYVA CEAAKEAVWLKKF DLEVVPNMHL ITLYCDN+GAVANSREPRSHKRGKHIE+KYHL+REIVHRGDV VTKIS EQN
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+AD FTKALTAKVFES LHGLGLRGL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| A0A5A7U7L0 Gag/pol protein | 1.9e-111 | 89.38 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
M NIPYASAVGSLMY MLCTRPDICYSV IVSRYQ LGRDHWT VKNILKYLRRTKDYM VYGSKDLILTGYT+SDFQTDKDARKST GS+FTLNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI DSTMEAEYVA CEAAKE VWLKKF TDLEVV NMHLPITLYCDNSGAVANSREP+SHKRGKHIERKYHL+REIVH+GDVI TKIS EQN
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPFTKALTAKVFES LHGLGLR L
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| A0A5A7UUR4 Gag/pol protein | 1.8e-109 | 86.73 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNIPYA A+GSLMY MLC RPDICYSV IVS YQSN GRDHWT VKNI+KYLRRTKDYM VYGSKDLILT YTDSDFQTDKDARKSTSGS+F LNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI+DSTME +YVA CEAAKEAVWLKKF TDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHL+R+IVHRGDV VTKIS E+N
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPF KALTAK+FES LHGLGLRGL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| A0A5D3DJL5 Gag/pol protein | 1.8e-109 | 86.73 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
MSNIPYA A+GSLMY MLC RPDICYSV IVS YQSN GRDHWT VKNI+KYLRRTKDYM VYGSKDLILT YTDSDFQTDKDARKSTSGS+F LNGGAV
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
+WRSIKQSCI+DSTME +YVA CEAAKEAVWLKKF TDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHL+R+IVHRGDV VTKIS E+N
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFESDLHGLGLRGL
+ADPF KALTAK+FES LHGLGLRGL
Subjt: VADPFTKALTAKVFESDLHGLGLRGL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-37 | 39.38 | Show/hide |
Query: NIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSGSIFTL-NG
N P S +G LMY+MLCTRPD+ +V I+SRY S + W +K +L+YL+ T D L++ K+L + GY DSD+ + RKST+G +F + +
Subjt: NIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSGSIFTL-NG
Query: GAVIWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISF
+ W + +Q+ ++ S+ EAEY+A EA +EA+WLK T + + + PI +Y DN G ++ + P HKR KHI+ KYH RE V + + I
Subjt: GAVIWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISF
Query: EQNVADPFTKALTAKVFESDLHGLGL
E +AD FTK L A F LGL
Subjt: EQNVADPFTKALTAKVFESDLHGLGL
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| P0CV72 Secreted RxLR effector protein 161 | 7.3e-28 | 46.62 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSGSIFTLNGGA
M N+PY SAVG++MY+M+ TRPD+ +V ++S++ S+ HW A+K +L+YL+ T+ Y L + L GY+D+D+ D ++R+STSG +F LNGG
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSGSIFTLNGGA
Query: VIWRSIKQSCISDSTMEAEYVATCEAAKEAVWL
V WRS KQ ++ S+ E EY+A EA +EAVWL
Subjt: VIWRSIKQSCISDSTMEAEYVATCEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-50 | 46.98 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
M+ +PY+SAVGSLMY M+CTRPDI ++V +VSR+ N G++HW AVK IL+YLR T L +G D IL GYTD+D D D RKS++G +FT +GGA+
Subjt: MSNIPYASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAV
Query: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
W+S Q C++ ST EAEY+A E KE +WLK+F +L + ++ +YCD+ A+ S+ H R KHI+ +YH +RE+V + V KIS +N
Subjt: IWRSIKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQN
Query: VADPFTKALTAKVFE
AD TK + FE
Subjt: VADPFTKALTAKVFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e-26 | 34.25 | Show/hide |
Query: YASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRS
Y VGSL Y+ TRPDI Y+V +S++ +H A+K IL+YL T ++ + + L L Y+D+D+ DKD ST+G I L + W S
Subjt: YASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRS
Query: IKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQNVADP
KQ + S+ EAEY + + E W+ T+L + + P +YCDN GA P H R KHI YH +R V G + V +S +AD
Subjt: IKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQNVADP
Query: FTKALTAKVFESDLHGLGL
TK L+ F++ +G+
Subjt: FTKALTAKVFESDLHGLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-28 | 34.7 | Show/hide |
Query: YASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRS
Y VGSL Y+ TRPD+ Y+V +S+Y DHW A+K +L+YL T D+ + + L L Y+D+D+ D D ST+G I L + W S
Subjt: YASAVGSLMYVMLCTRPDICYSVEIVSRYQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRS
Query: IKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQNVADP
KQ + S+ EAEY + + E W+ T+L + + P +YCDN GA P H R KHI YH +R V G + V +S +AD
Subjt: IKQSCISDSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLVREIVHRGDVIVTKISFEQNVADP
Query: FTKALTAKVFESDLHGLGL
TK L+ F++ +G+
Subjt: FTKALTAKVFESDLHGLGL
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