; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0022251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0022251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionhistone H1-like
Genome locationCMiso1.1chr01:21314308..21315629
RNA-Seq ExpressionCmc01g0022251
SyntenyCmc01g0022251
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0030527 - structural constituent of chromatin (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041935.1 histone H1-like [Cucumis melo var. makuwa]2.7e-11997.81Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKA------APKPKPAPAKSKSSAVAKP
        LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKA      APKPKPAPAKSKSSAVAKP
Subjt:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKA------APKPKPAPAKSKSSAVAKP

Query:  KAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        KAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
Subjt:  KAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

KAA0057394.1 histone H1 [Cucumis melo var. makuwa]8.8e-10288.24Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKL+ASGKLVKVKSSFKLKP   AV KPASP  KKPVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKPVVKKA AAKKA ++SVK+KKV+S AK AP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

XP_008447183.1 PREDICTED: histone H1-like [Cucumis melo]1.1e-12099.63Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKT
        LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKT
Subjt:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKT

Query:  KAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        KAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKA AAKKALARSVKSKKVESPAKTAPAKRGRK
Subjt:  KAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

XP_008449373.1 PREDICTED: histone H1 [Cucumis melo]8.8e-10288.24Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKL+ASGKLVKVKSSFKLKP   AV KPASP  KKPVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKPVVKKA AAKKA ++SVK+KKV+S AK AP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

XP_038888055.1 histone H1-like [Benincasa hispida]3.7e-10086.4Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVE AAE  N EQAEENPAN+AAKSKKS+EPKEKKPAA +K R+PPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIE K+KQLP NFKK+L
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKL+ASGKLVKVK+SFKLKP   A+ KPA+P  KKPVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA AKSKSSAVAKPKA
Subjt:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        A KTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKP VKKA A KKA A+SVK+KKV+SPAK A AKRGRK
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

TrEMBL top hitse value%identityAlignment
A0A1S3BGU4 histone H1-like5.3e-12199.63Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKT
        LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKT
Subjt:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKT

Query:  KAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        KAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKA AAKKALARSVKSKKVESPAKTAPAKRGRK
Subjt:  KAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

A0A1S3BL93 histone H14.2e-10288.24Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKL+ASGKLVKVKSSFKLKP   AV KPASP  KKPVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKPVVKKA AAKKA ++SVK+KKV+S AK AP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

A0A5A7UQL0 Histone H14.2e-10288.24Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVE AAE TNAEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKL+ASGKLVKVKSSFKLKP   AV KPASP  KKPVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPKT AKPKAAPKPK AP KSKSSAVAKPKA
Subjt:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        A KTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKPVVKKA AAKKA ++SVK+KKV+S AK AP+KRG K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

A0A5D3D1X0 Histone H1-like1.3e-11997.81Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKA------APKPKPAPAKSKSSAVAKP
        LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKA      APKPKPAPAKSKSSAVAKP
Subjt:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKA------APKPKPAPAKSKSSAVAKP

Query:  KAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        KAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
Subjt:  KAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

A0A6J1CWP2 histone H12.3e-10086.76Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPVVPVE AAE T+AE AEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYEEMI DAIVTLKERTGSSQYAITKFIE KQK LPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
        LFHLKKL+ASGKLVKVKSSFKLKP   AV KP SP  KKP AAKP+ K  AK KAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA
Subjt:  LFHLKKLLASGKLVKVKSSFKLKP---AVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKA

Query:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        ATKTKAAPKPKAKEKPAKVARTSTRTSPGR+APAPKP  KKA AAKKA A+SVK+KKV+SPAK APAKRG+K
Subjt:  ATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

SwissProt top hitse value%identityAlignment
P08283 Histone H11.6e-4555.96Show/hide
Query:  MATEEPVVPVEYAAE--------LTNAEQAE-ENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQ
        MATEEP+V VE   E        +T  E  E E P  E  K+KK++  K KK +   KPR+P +HP YEEMIKDAIV+LKE+ GSSQYAI KFIE KQKQ
Subjt:  MATEEPVVPVEYAAE--------LTNAEQAE-ENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQ

Query:  LPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAV-AKSPAKPKAAAKPKPKTAAKPKA-APKPKPAPAKSKSS
        LP+NFKKLLL +LKK +ASGKL+KVK SFKL  A        KKP  AKP++KT AK K+V AK  AKPKA A  KPK A+K KA A KPK A AK K+ 
Subjt:  LPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAV-AKSPAKPKAAAKPKPKTAAKPKA-APKPKPAPAKSKSS

Query:  AVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRG
        A      A K KA  KPK+K KPAKVA+TS +T+PG+K  A K V     AAKK   +SVK+K V+SP K    KRG
Subjt:  AVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRG

P23444 Histone H11.0e-2849.81Show/hide
Query:  TEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQK-QLPSNFKKLLL
        TE P   V+ A E      A       AAK+KK+  PK+         R+ PTH PY EM+ +AI +LKERTGSS YAI KF+E K K +LP NF+KLL 
Subjt:  TEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQK-QLPSNFKKLLL

Query:  FHLKKLLASGKLVKVKSSFKLKPAV---AKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPK-PAPAKSKSSAVAKPKAA
          LKKL+A GKL KVK+S+KL  A     KP +  KKP     + K  AKPK  AK+PAK K A KPKP  AAKPKA  KPK PA  K+K +A AKPK A
Subjt:  FHLKKLLASGKLVKVKSSFKLKPAV---AKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPK-PAPAKSKSSAVAKPKAA

Query:  TKTKAAPKPKAKEK-PAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKK
            A PKP AK+   AK A+TS + +PG+KAPA K    K AA     A S K+KK
Subjt:  TKTKAAPKPKAKEK-PAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKK

P26568 Histone H1.13.8e-3151.34Show/hide
Query:  AELTNAEQAEENPANEAAKSKKSREPKEKKP-AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGK
        A +T+A   E+ PA +  K+K  +E KEKK  AA  K R+  +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K+K+LP  F+KLLL +LK+L+ASGK
Subjt:  AELTNAEQAEENPANEAAKSKKSREPKEKKP-AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGK

Query:  LVKVKSSFKLKPAVAKPASP---VKKPVAAKPRSKTV----AKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAA-P
        LVKVK+SFKL  A AK +SP    +K   AK +  TV    AK K  A S AK   A KPK   A K  A  K KP P  +         AATK KA   
Subjt:  LVKVKSSFKLKPAVAKPASP---VKKPVAAKPRSKTV----AKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAA-P

Query:  KPKAKEKPAKVARTSTRTSPGRKA-PAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAK
        KPKAK +PAK A+T+  TSP +KA  A K V   A   K  + + VK K V+SPAK A ++
Subjt:  KPKAKEKPAKVARTSTRTSPGRKA-PAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAK

P26569 Histone H1.24.2e-3854.42Show/hide
Query:  MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPS
        M+ EE  VP  V+  A  T  +  E+ PA +  KSKK+   K  KKP   AA  K ++  +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K K LP 
Subjt:  MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPS

Query:  NFKKLLLFHLKKLLASGKLVKVKSSFKL----KPAVAKPASPVKK--PVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPK--AAPKPKPAPAKS
         F+KLLL +LK+L+AS KLVKVK+SFK+      A  KPA+PVKK   V AKP+ K VA   A AK+ A  K   KP  K  AK K  A PK K   AK 
Subjt:  NFKKLLLFHLKKLLASGKLVKVKSSFKL----KPAVAKPASPVKK--PVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPK--AAPKPKPAPAKS

Query:  KSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        KS +VA   A +KTKA A KPKAKE+PAK +RTSTRTSPG+K  AP    KK A  KKA A+SV   KV+SPAK A  ++ +K
Subjt:  KSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

P37218 Histone H17.8e-4556.08Show/hide
Query:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL
        MATEEPV+  E   E    E  ++     A   K  +E K KKPAA RK  + PTHPPY EMIKDAIVTLKERTGSSQ+AITKFIE KQK LPSNFKKLL
Subjt:  MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLL

Query:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPV----KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKP--------------KPKTAAKPKAAPKPKP-
        L  LKK +AS KLVKVK+S+KL P+ +KPA+      KKP AAK  SK  AKPKA  K  AKP A AKP              K K AAK K A K KP 
Subjt:  LFHLKKLLASGKLVKVKSSFKLKPAVAKPASPV----KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKP--------------KPKTAAKPKAAPKPKP-

Query:  APAKSKSSAVAKPKAATKTKAAP-------KP--KAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        A AK K++A AKPKAA K KAAP       KP  KAK   AKVA+T+TRT+P RKA AP     KA  AKK   +   +K V+SPAK A  KRGRK
Subjt:  APAKSKSSAVAKPKAATKTKAAP-------KP--KAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein2.7e-3251.34Show/hide
Query:  AELTNAEQAEENPANEAAKSKKSREPKEKKP-AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGK
        A +T+A   E+ PA +  K+K  +E KEKK  AA  K R+  +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K+K+LP  F+KLLL +LK+L+ASGK
Subjt:  AELTNAEQAEENPANEAAKSKKSREPKEKKP-AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGK

Query:  LVKVKSSFKLKPAVAKPASP---VKKPVAAKPRSKTV----AKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAA-P
        LVKVK+SFKL  A AK +SP    +K   AK +  TV    AK K  A S AK   A KPK   A K  A  K KP P  +         AATK KA   
Subjt:  LVKVKSSFKLKPAVAKPASP---VKKPVAAKPRSKTV----AKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAA-P

Query:  KPKAKEKPAKVARTSTRTSPGRKA-PAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAK
        KPKAK +PAK A+T+  TSP +KA  A K V   A   K  + + VK K V+SPAK A ++
Subjt:  KPKAKEKPAKVARTSTRTSPGRKA-PAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAK

AT2G18050.1 histone H1-33.0e-0739.88Show/hide
Query:  KKPAAHRKPRSP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQ-LPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVA
        KK  A +KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IE K K  LP +F+K L   LK  +A GKLVK+++S+KL        S   K + 
Subjt:  KKPAAHRKPRSP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQ-LPSNFKKLLLFHLKKLLASGKLVKVKSSFKLKPAVAKPASPVKKPVA

Query:  AKPRSKTVAKPKAVAKSPAKPKAAAKPKP-KTAAKPKAAPKPKPAPA---KSKSSAVAKPKAATKTKA
         +   K     K   K   K   ++  +P KT +  K   K K   A   KS  S+V K KA   + A
Subjt:  AKPRSKTVAKPKAVAKSPAKPKAAAKPKP-KTAAKPKAAPKPKPAPA---KSKSSAVAKPKAATKTKA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein3.0e-3954.42Show/hide
Query:  MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPS
        M+ EE  VP  V+  A  T  +  E+ PA +  KSKK+   K  KKP   AA  K ++  +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K K LP 
Subjt:  MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPS

Query:  NFKKLLLFHLKKLLASGKLVKVKSSFKL----KPAVAKPASPVKK--PVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPK--AAPKPKPAPAKS
         F+KLLL +LK+L+AS KLVKVK+SFK+      A  KPA+PVKK   V AKP+ K VA   A AK+ A  K   KP  K  AK K  A PK K   AK 
Subjt:  NFKKLLLFHLKKLLASGKLVKVKSSFKL----KPAVAKPASPVKK--PVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPK--AAPKPKPAPAKS

Query:  KSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK
        KS +VA   A +KTKA A KPKAKE+PAK +RTSTRTSPG+K  AP    KK A  KKA A+SV   KV+SPAK A  ++ +K
Subjt:  KSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.9e-2249.06Show/hide
Query:  MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPS
        M+ EE  VP  V+  A  T  +  E+ PA +  KSKK+   K  KKP   AA  K ++  +HP YEEMIKDAIVTLKERTGSSQYAI KFIE K K LP 
Subjt:  MATEEPVVP--VEYAAELTNAEQAEENPANEAAKSKKSREPK-EKKP---AAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPS

Query:  NFKKLLLFHLKKLLASGKLVKVKSSFKL----KPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKS-KSS
         F+KLLL +LK+L+AS KLVKVK+SFK+      A  KPA+PVKK      ++  VAKPKA     ++      P  K AA  K     K APAKS K  
Subjt:  NFKKLLLFHLKKLLASGKLVKVKSSFKL----KPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKS-KSS

Query:  AVAKPKAATKTK
        + AK  +  K K
Subjt:  AVAKPKAATKTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTATGCGGCAGAGCTGACTAACGCCGAACAAGCGGAAGAAAATCCGGCCAACGAAGCTGCGAAGTCTAAGAAGTCGAG
AGAGCCTAAAGAGAAGAAACCTGCTGCTCATAGAAAACCAAGAAGTCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGA
CTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAACAAAGCAAAAGCAACTTCCATCTAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTCTCGCCTCC
GGGAAGTTGGTGAAGGTTAAGAGTTCGTTTAAGCTTAAGCCGGCAGTTGCGAAACCTGCTTCTCCTGTGAAGAAGCCTGTAGCTGCTAAGCCGAGGTCTAAAACCGTAGC
TAAGCCTAAAGCTGTGGCTAAGTCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCGAAGCCTAAGACGGCTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCTGCTCCAG
CCAAGTCAAAAAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGACAAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGTTGCAAGGACTTCGACC
AGAACCTCACCCGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTAAAGAAGGCGGCCGCGGCCAAGAAGGCTCTGGCAAGAAGTGTGAAATCTAAGAAAGTGGAATCGCC
GGCGAAAACGGCTCCGGCTAAAAGAGGAAGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
GAAATTACCAGCAACGTATCATATAGCTTCCTCTCTTTTCTTAATATCCCAATTTTTCATTTCGATAATTTTCTTCTTCTTCTACCCTAATCCAATTCAATTCTTCTGTT
CCCTTAACCCTAATTCTACTTTCATATTGTTGGATTTGATTTCGTTTCTACTCCAATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTATGCGGCAGAGCTGACTAACG
CCGAACAAGCGGAAGAAAATCCGGCCAACGAAGCTGCGAAGTCTAAGAAGTCGAGAGAGCCTAAAGAGAAGAAACCTGCTGCTCATAGAAAACCAAGAAGTCCTCCAACT
CATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAACAAAGCAAAAGCAACT
TCCATCTAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTCTCGCCTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTTAAGCTTAAGCCGGCAGTTGCGAAAC
CTGCTTCTCCTGTGAAGAAGCCTGTAGCTGCTAAGCCGAGGTCTAAAACCGTAGCTAAGCCTAAAGCTGTGGCTAAGTCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCG
AAGCCTAAGACGGCTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCTGCTCCAGCCAAGTCAAAAAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGACAAAGACTAAAGC
CGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGTTGCAAGGACTTCGACCAGAACCTCACCCGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTAAAGAAGGCGG
CCGCGGCCAAGAAGGCTCTGGCAAGAAGTGTGAAATCTAAGAAAGTGGAATCGCCGGCGAAAACGGCTCCGGCTAAAAGAGGAAGGAAGTAAAAGGGGGTAGATCGTGGC
GGCGGTCCTGTAAATTCGTAATCCCTTCCGTACAGACCCTTACATGCCGTGCTACAGAGGAGTTTACTTCAAGCTTTTCGAAAATTTCTTTTATTTGTTAATTTGTATAA
CTTTTTCTCTCCCCAAGTTGATATATCACTCAGATTAGTTTTTAATAGATATTCTGTGATCATTTAGCGACGTTGATTCCATTTCTCAACCTATTATTTCTATGGGCAAT
TCGACTCCATCAATTATC
Protein sequenceShow/hide protein sequence
MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLAS
GKLVKVKSSFKLKPAVAKPASPVKKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTST
RTSPGRKAPAPKPVVKKAAAAKKALARSVKSKKVESPAKTAPAKRGRK