CuGenDBv2

Gene ID	Cmc01g0022801
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:22154126..22156691
RNA-Seq Expression	Cmc01g0022801
Synteny	Cmc01g0022801
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.32

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQGNDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LH VPVSI+SD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQSLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEFA+GDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEF VGDKVFLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDY+PL+IDENLSY EQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.6

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Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEF + DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDYEPLEIDENLSY EQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.36

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEF VGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDY+PLEIDENLSY EQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0065935.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKN+ PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL        FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLK+KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSTALITRQAPLHRDLE+AEI VSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEF LSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG TKMYQDLKRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FT+KFWKGLQTAMG RLDFSTAFHPQTDGQTERLNQVL+DMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC RSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRK+LEF VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL+TVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPV
        SMLRKYV DPSHVVDYEPLEIDENLSY EQPV
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

89.32

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQGNDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LH VPVSI+SD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQSLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEFA+GDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7U330 Reverse transcriptase

0.0e+00

88.72

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEF VGDKVFLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDY+PL+IDENLSY EQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7UAA8 Reverse transcriptase

0.0e+00

88.6

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEF + DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDYEPLEIDENLSY EQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7UP94 Pol protein

0.0e+00

88.36

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKL      C FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLE+AEIAVSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRKDLEF VGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        SMLRKYVPDPSHVVDY+PLEIDENLSY EQPVE
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7VJN7 Reverse transcriptase

0.0e+00

88.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKN+ PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL        FW               + ++   IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPFWATWF-----------LRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------
        IATPLTQLTRKGAPFVWSKACEDSFQNLK+KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK                                 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK---------------------------------

Query:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT
                  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSTALITRQAPLHRDLE+AEI VSVGAVTMQLAQLT
Subjt:  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
        VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEF LSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPG TKMYQDLKRVYWWRNMKRE+AEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYMSEIV+LHGVPVSI+SDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FT+KFWKGLQTAMG RLDFSTAFHPQTDGQTERLNQVL+DMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC RSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSY DVRRK+LEF VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL+TVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPV
        SMLRKYV DPSHVVDYEPLEIDENLSY EQPV
Subjt:  SMLRKYVPDPSHVVDYEPLEIDENLSYAEQPV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.3e-113

31.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N  PLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L      C F      +  + +  +        I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                                   
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------

Query:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA
                        KI TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV
         ++++I E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV

Query:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    E  Q T +  Q ++  ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRKY
        P S+  +    FHVS L KY
Subjt:  PPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein

2.3e-113

31.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N  PLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L      C F      +  + +  +        I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                                   
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------

Query:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA
                        KI TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV
         ++++I E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV

Query:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    E  Q T +  Q ++  ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRKY
        P S+  +    FHVS L KY
Subjt:  PPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein

2.3e-113

31.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N  PLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L      C F      +  + +  +        I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                                   
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------

Query:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA
                        KI TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV
         ++++I E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV

Query:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    E  Q T +  Q ++  ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRKY
        P S+  +    FHVS L KY
Subjt:  PPSLSTV-HDVFHVSMLRKY

P0CT37 Transposon Tf2-4 polyprotein

2.3e-113

31.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N  PLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L      C F      +  + +  +        I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                                   
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------

Query:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA
                        KI TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV
         ++++I E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV

Query:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    E  Q T +  Q ++  ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRKY
        P S+  +    FHVS L KY
Subjt:  PPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein

2.3e-113

31.46

Show/hide

Query:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N  PLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L      C F      +  + +  +        I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKL------CPF------WATWFLRLESLW-----IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                                   
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG----------------------------------

Query:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA
                        KI TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ----------------KIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV
         ++++I E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREIAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGV

Query:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIISDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    E  Q T +  Q ++  ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYVDVRRKDL-EFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRKY
        P S+  +    FHVS L KY
Subjt:  PPSLSTV-HDVFHVSMLRKY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.9e-15

44.58

Show/hide

Query:  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        +EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PVL +PD    FV
Subjt:  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGAAATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTATTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATAC
TCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCT
GTGGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTA
TAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTCGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTT
CTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGATATTCACGGATCATAAGAG
CTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATG
TGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCAGGCTGAGATTGCAGTGTCAGTGGGG
GCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGA
GGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGCGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCGGATAGTGCGGTTAAGACAGAATTATTATCTGAGG
CTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGATAGCAGAATTTGTTAGT
AGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCAT
TACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCATTTCGTTCCGGGTAAATCCACCTATACTGCTAGTA
AGTGGGCACAGCTGTACATGTCTGAAATAGTGAAATTACACGGAGTGCCAGTGTCGATTATTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAG
ACGGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATT
GGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAAT
GTTGTAGATCCCCAGTTTGCTGGGGTGAGGTGGGTGAGCAGAGTTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCAT
ACCGCTCAGAGTAGGCAGAAGAGTTATGTAGATGTGAGGCGGAAGGATCTCGAATTTGCGGTAGGGGACAAGGTTTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACG
ATTTGAAAGAAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAG
TTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCATTGGAGATTGATGAAAACTTGAGCTATGCTGAACAA
CCCGTTGAGTCTTATGGCGGAATCACCGGGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRLCIDYRELNKVTVKNRNPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY
SKTEAEHEEHLRIVLQTLRDNKLCPFWATWFLRLESLWIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV
LTVPDGSGSFVIYSDASKKGLGCVLMQQGKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLEQAEIAVSVG
AVTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREIAEFVS
RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVKLHGVPVSIISDRDARFTSKFWKGLQ
TAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLMGPELVQSTNEAIQKIRSRMH
TAQSRQKSYVDVRRKDLEFAVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQ
PVESYGGITG

Cmc01g0022801 (gene) of Melon (Charmono) v1.1 genome