; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0023151 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0023151
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon gag protein
Genome locationCMiso1.1chr01:22753855..22763918
RNA-Seq ExpressionCmc01g0023151
SyntenyCmc01g0023151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042091.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.3e-2697.14Show/hide
Query:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDKV
        MARTSSSTSQMSQLASTV+KLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSN TLHKFSNPFLVKKDKV
Subjt:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDKV

KAA0042094.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-1074.58Show/hide
Query:  MSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK
        MSQLAS VSK ESKGKLPSQ +VANVSA T C GKVVDTPSS+TTL K + P   KKDK
Subjt:  MSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK

TYK18034.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-2597.1Show/hide
Query:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK
        MARTSSSTSQMSQLASTV+KLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSN TLHKFSNPFLVKKDK
Subjt:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK

XP_011076836.1 uncharacterized protein LOC105160986 [Sesamum indicum]1.5e-0648.84Show/hide
Query:  NLEDILTKMVNNNLTFQQ----TMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLESKGKLPSQSEV---ANVSAFTPCTGK
        +LEDI+  +V N   FQQ      Q FQ+ T  FQQ+      +  SQ+SQLAS++ KLES+GKLPSQS +    NVSA T C+GK
Subjt:  NLEDILTKMVNNNLTFQQ----TMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLESKGKLPSQSEV---ANVSAFTPCTGK

XP_031127585.1 uncharacterized protein LOC116029679 [Ipomoea triloba]5.0e-0751.61Show/hide
Query:  MNLEDILTKMVNNNLTFQQTMQDFQKDTLAFQQ-----EKMARTSSS--TSQMSQLASTVSKLESKGKLPSQSEV---ANVSAFTPCTGKVVD
        M+LEDI+  +  N   FQQ  Q FQ+DT  FQQ     ++  RTS     SQMSQLASTVS+LES+GKLPSQ+ V    NVS FT  +GK ++
Subjt:  MNLEDILTKMVNNNLTFQQTMQDFQKDTLAFQQ-----EKMARTSSS--TSQMSQLASTVSKLESKGKLPSQSEV---ANVSAFTPCTGKVVD

TrEMBL top hitse value%identityAlignment
A0A5A7TKJ9 Retrotransposon gag protein3.0e-2697.14Show/hide
Query:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDKV
        MARTSSSTSQMSQLASTV+KLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSN TLHKFSNPFLVKKDKV
Subjt:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDKV

A0A5D3D2A3 Retrotransposon gag protein8.1e-1174.58Show/hide
Query:  MSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK
        MSQLAS VSK ESKGKLPSQ +VANVSA T C GKVVDTPSS+TTL K + P   KKDK
Subjt:  MSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK

A0A5D3D3D6 Retrotransposon gag protein8.9e-2697.1Show/hide
Query:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK
        MARTSSSTSQMSQLASTV+KLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSN TLHKFSNPFLVKKDK
Subjt:  MARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDK

A0A6I9T1U5 uncharacterized protein LOC1051609867.1e-0748.84Show/hide
Query:  NLEDILTKMVNNNLTFQQ----TMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLESKGKLPSQSEV---ANVSAFTPCTGK
        +LEDI+  +V N   FQQ      Q FQ+ T  FQQ+      +  SQ+SQLAS++ KLES+GKLPSQS +    NVSA T C+GK
Subjt:  NLEDILTKMVNNNLTFQQ----TMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLESKGKLPSQSEV---ANVSAFTPCTGK

A0A6P6WYK5 uncharacterized protein LOC1137374841.9e-0447.78Show/hide
Query:  MNLEDILTKMVNNNLTFQQTMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLES--KGKLPSQSEV--ANVSAFTPCTGKVVDTPS
        M+LED++  + +N + FQQ       DT A  QE  AR  +  +QMSQLAS V++L+S  KGKLPSQ EV   NVSA T  +GK V+ P+
Subjt:  MNLEDILTKMVNNNLTFQQTMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLES--KGKLPSQSEV--ANVSAFTPCTGKVVDTPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTAGAGGACATTTTAACCAAAATGGTTAACAACAATTTGACATTTCAACAAACAATGCAAGATTTTCAAAAAGATACCTTAGCTTTTCAACAAGAAAAAATGGC
TAGAACTTCTAGTTCAACTAGCCAAATGTCTCAACTTGCTTCAACGGTGAGTAAACTTGAGTCTAAGGGTAAGCTTCCTTCACAATCCGAAGTTGCAAATGTAAGTGCCT
TTACTCCTTGTACTGGTAAAGTTGTAGACACTCCTAGTTCAAACACTACTTTGCATAAGTTTAGCAACCCCTTTCTTGTTAAAAAGGATAAGGTAGATCTACACTTGGTT
GCCATAAAGGTCTTGAAGTGCTTCATTCAGACTTTTTTAACTTTTCGGTAA
mRNA sequenceShow/hide mRNA sequence
CTTCGTTCTGTCCCTTCTTCCATTTTTATAAGAAAAACAATCCATCTTCTCACTCATTTCAAATTTTGGGGTCTTTCTTCTTTAACGACAACTCTTTCTTCTCTCCGTCT
CTCTCGCTCTCTTGTCTTCTTCATCTTCACTCTTCCTATCTCTCAATTTCCATTTCTGTAAAATTAAGCATTTTATGTAGCCAAGAAACCCTATATTGCGAGAAACCCAT
CTCGCCGATCCACTGCCATCTACTTCTCCTTGCCCAAACGGCACCGAAATCAAGGGCAACAAACCCCCTCGGAAACCCAAGTCGTCTTCCAAAGAAAATGCTCCACCATT
AGATCCCAGCTCCATGGTTCTCGATTCCAAACCCTCGCTTGCTAGGTTGAAGACCGTTCCTGAGAATTCCATCTTGGGTTGTTCGATTCTTGAGTGAAGTCAGTTGGTAT
CAGGTTTCTCTCATCCACAGGAATAAAGGGAAATGAAGTATAACCAAACTTGGAACCTTTGCAAGCAAGCTTCCATGAAGAACTAGATTACAAGGAGAGGTTTTCTATTC
CCTTTCTCGTTTTTCCATCCTTAGAATCTTGCTTGAAATGCTTTAAGGACAAAGAAAATTTTTAAGTGAGGTGGGTGGGGTTGTAGCCTTGCATGTTCAATGTCCTTTGA
AAAATTTTCATTTTTCCAAAAATCCCTAAATTTTAAAATTTTTTCAAATGCTCTATTCTTAGAATAATTACCATGTCTACTTTGCTTTCTAGCTTAGAAAAGCATGTCTG
CCCAACCTTTGAGCACAGAGCTCGGGTTTGTGATTGTATTTGTTATTTGAATATCTTAAATATGTCAAAAAATTCATACTTTGATAGCTTAGAAATGGGTAGAACACATG
CTGTCCATTTTCTGAATATAGTGAATTATGTACATACTTAATAATATGAGCTGAAAACATATGTTGCTGTCTTTTTTATATTTATACCCCTCTTTTGGCCATACCCACTT
GTATATGATTGTTTGGATGCCAAGTATGATTGTTAGTGAATGCTTGATTGCTTGTATAAAATAATTAATGCATGGATGCCTTTTCTTAGCTAGTCTTCTTTGTTGCTTAA
CTAGGACATGCCTATGATTCACTTGGTTGCTATATGTAAAAAAAAGTGAGGTTATCTTTGAGCACACACACAAAAAAAAAAAAAAAAAACAAAAAGAATACAAATGCAAT
ATGCATAATAGGTCATGATAAAAATAAAAGAGTTAAGTCGGCTAGGTTAGAATGAGTTGAGTTCCCTCAGTATCAAAGCTTGTGTAAGGAACTCTTCACTTTTGGCCTAT
GCAAAACCAGACTTGTCTAGTTCTTAAAGTTCTTAACCTAGCATCTTGTTGATCAAGGGCTTAGAAAAAAGAAGGAATCCTTCTCGATCCACAATAGGGAAAAAAAGTCT
AAGGCGTTTTTAACTCTTTCTGAGCATGTCTAGAGTCAGAGTAGCAAAACTTGAGTGCATACTAAACATTGTTTTCATAGGGCAATTGTAGTTAAAACTTGTCTCCAACC
GATAGCTAGCTTTCTTTGAATGATCAAATGAAAGTTAGAATAGCTTTAGATTGATTGTTGAGGCATAGAGTTAAGTTACTTAGTTGACTTGTTAAGAAGGCATCAAAGTT
ATACTTGCATGATTGTTTGAGATTTTACACTTAAGTTTGCTGTGTGCTTCTTACGCATGCTGCATGATTGACTGATCCTTATTAGAATTACTTTGTCGTGACAAGCAATA
AGTGGGGGTGTTTGATGGGGCAATATTTTCATTTTGCATATTGTAAAAGAAAAAAGTTTGCATATTCTTGCCTTTTGAATTCATATTTTTCTTAAGTGGTACCATTAAGG
ATAGAAAATATAAAAACATTGAATGATCTATTTTCCTCTTCTTGCTTATAGTATATTAATGATCTTTACTCTACTTGCTTTTTGATGTATCTCTTCTTCTCTAAATAACA
TAGAAACCTTTGAAGACATAGGATTAATAGAAATAAGATTAAGAAGAGAGAGGAAAGAAAGAAACTTAGAAGAAAACACTTTAGGGTCAGACAACCATCAAGAAGATCCA
CCGGCGGTGGGAAATGCACTTAGTAAAAAACCCAAACTGAGGCTAGGGCATTAATTGCTAGAACGGCGAAAAATACTCAAACCTTTGGGAGTAGGACCGAGAATTCAAAT
TCTTCCTCTAGTGAGGTAAGTGAGCTTAAAAATCAAATGAGCTAGCTTATAAGCATGGTTAGAGGAGATAACAAACAATTGATGATTTGTGGGGTATATGGAAAAACCAG
ACACTTTAATGATCAATGCCCACAAGTAAAAGATGTCGACCTAGCTAATGGGTTTAGGAGATATGAACCACCAAGTTCCAACTTTTACAATCCTTCACAGAAGGATCACC
CAAACCTTAAGTGGGGATCTCAAGAACCTAGACAAACATACCCATCAAATCCTTCTTCCTGAACAAACAATGTAAGATTTTCGAAAAGATACCTTAGCTTTTCTCATCGT
ATATCTCTCTTGTACTTTGAGTTTCTATTACTAATAAAGAAGTTTATCTCCATTTCAAAAAAAAAAAAAAAATACCTTAGCTTTTCAACATGAAACAAGGCTGGAATTTC
TAGTTTAACTAGCCAAATATGTCAACTTGCTTCAACGATGAGTAAACTTGAGTCTAAGGGTAAGCTTCCTTCACGACCCGATTTTGCAAATGTAAGTGCCCTTACTTTTC
ATACTGATAAAGTTGTAGAAACTTCTAGTTTAAACTCTACTTTGCATTAGTCTAGCAACCCCTTTCTTGTTAAAAAGGATAAGGTAGATTCACATTCAGCTTCTTCTTCT
TCAATTTGTACTTCTTCTTGTTCAAAACCTTTGAACAATGTTGCTAATGCTCCTTTTCCTTCCAAGTTAAATCCACCAGGGAAGGACAAAGCCAAAGATGAAGAACTTCT
TCAAATCTTGAAGGTGATGGAGAGAAACTTTCCTTTACTTAGTGCGGTGCAACAAATTTCCAAGTATGCAAGTTTCTCAAGGAGCTTTATACAAAGAAGATAAGATATTC
AGTCAAAGAAAACATCATTGTAAGTCAAAATGTTTCTGAATTAATCAAGAAAGATATTCCAAAGAAAAGCTTGGATCCAGTGTGCATGAGCTTCGCTACCTAGAAAAAGT
TGATAAAAAGCATGAGTTAGAAGATGAAAATGCAAGCTTGGAGCAAAATGCAAGAACCAACTTCCTCCATCAATAGTCAACCAAAGCTTGGAAGGTCTTCAAGAATCACA
TAAAGAGGAAAGAAACTCTTGGTCATTGATTCGGGTTGAAGAGGGAGAATACGGTCGAATAAAGGGAAATGAAGTATAACCAAACTTGGAACCTTTGCAAGCAAGCTTCC
ATGAAGAACTAGATTACAAGGGAAAGTTTTATGTTCCCCTTCTCATTTTTCCATCCTTAGAATCTTGCTTAAAATGCTTTGAGGACAAAGAAAATTTTTAAGTGGGGGGT
GGATGGGGTTGTAGTCTTGTATGTTCAATGTCCTTTGGAAAATTTTCATTTTGCAAAAGATGCCCAAACTTTAACATTTTTTCAAATGTTACATTCTTAGAATAAATACC
ATGTCTACTTTGCTTTCTAGCTTAGAAAAGCCTGCCTTCCCAACCCTTGAGCACGGAGCTCAGGTTTGTGATTGTGTTTATTATTTGAATATCATAAATATGTTGAAAAT
GCATACTTTGATAACTTAGAAATGAGGAGAACACATGCTGGCCATTTTCTGAATATAGTGAATTTTGTACATACTTAATAATATGGGCTGAAAACATATATTGTTGCCTT
TTTTATATTAATACCCCTCTTTTGGCCATACCCACTTGTATATGATTGTTTGAATGCCAAGTATGATTGTTAGTGAATGCTTGATTGCTTGTATAAAAGAATGAATGCAT
GGATGCCTTTTCTTAGCTAGTTTTCTTTGTTGCTTAACTAGGACATGCTTATGATGCACTTGTCTAAATCTTGTCTGGGGTAGTTTTTGAAAATGATAGGAAAGCTTTTT
AGAAGTTAAAGACGGTCATAACTTTTTTGTCCAGTTAAACCATGAGTTAGGAATCTCTTGTCTAGCCATAATGGAACTAGAAGTCTTACCCCCTTAAATAGAGATTTTGT
TGATGCGGCGGCGGGAGGTGCACTTAGTGATAAAACCCCAACTGAGGCTAGAGCATTAATTGCTAAAATAGCAAAAAATACTCAAACCTTTGAGAGTAGGATCGGGAGCT
CAAATTCTTCCTCTGGTGAGATATGTGAGCTTAAAAATCAAATGATACTTTAATGATCAATGCCCACAAGTAAAAGTTGTCAACCTAACTAATGAGAGATATGAACCACC
AAGTTCCAACTTTTACAATCCTTCATGGAAGGATCACCAAAACTTTAAGTGGAGATTTCAAGAACCTAGACAAACATATCCATCACATCCTTCTTCCTCAACTAGCATGA
ACTTAGAGGACATTTTAACCAAAATGGTTAACAACAATTTGACATTTCAACAAACAATGCAAGATTTTCAAAAAGATACCTTAGCTTTTCAACAAGAAAAAATGGCTAGA
ACTTCTAGTTCAACTAGCCAAATGTCTCAACTTGCTTCAACGGTGAGTAAACTTGAGTCTAAGGGTAAGCTTCCTTCACAATCCGAAGTTGCAAATGTAAGTGCCTTTAC
TCCTTGTACTGGTAAAGTTGTAGACACTCCTAGTTCAAACACTACTTTGCATAAGTTTAGCAACCCCTTTCTTGTTAAAAAGGATAAGGTAGATCTACACTTGGTTGCCA
TAAAGGTCTTGAAGTGCTTCATTCAGACTTTTTTAACTTTTCGGTAAGTCGTGAGTTGCGAACTTACACTGAAGTTTTGTCAAGTTGCTTTCAGATTTAAAGTGATACTT
ACACACGTTTTCAACACTATTTAAGTTGGTGTGAGACTAAGTTTGTTGAACTTACACACTCGATTACCATTTTGAGTTTTAAAGTGCTTTTTTCACACTTTTTTGAACTT
TTCGTAGTTAGGAGTTACGAATTTACGCTTAAGCATTGTTAGGTCGTTTTGAAAGTTCAAGTGATATTTAAAGAGGTTTTCAACACTTCTTAGGTTTGTTTGAAACAAAG
TTAATTGCCTTTACACACTTGGTTGCCATTTTGGATCTTAAAGTGCCTTTTTTCTCCATTTTTGTACTTTTTGGTAGGTTATGAGTTATGAACTTATACTTAAGCATTGT
TAGATCATTTTGATAGTTTAGACACCTTTTGAAATGCTTTTATGTTTTTTTGAAACTATGTTTGTTGCACATACACACTTGGGGTCCATTTTAGGTCCTTTTGAAATCCT
TAGATAATGCTTGCACCTCGTTGTAGGTGTATTCTTGGTGTGCTTGTTCGTGGCCACACAAGAGATCTTGCGATTGCTTCTTACTTGGTAGAAGGTTTTAGTTGGAATTG
ACGATATGTCGGGCCCC
Protein sequenceShow/hide protein sequence
MNLEDILTKMVNNNLTFQQTMQDFQKDTLAFQQEKMARTSSSTSQMSQLASTVSKLESKGKLPSQSEVANVSAFTPCTGKVVDTPSSNTTLHKFSNPFLVKKDKVDLHLV
AIKVLKCFIQTFLTFR