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Cmc01g0023201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0023201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCysteine desulfurase
Genome locationCMiso1.1chr01:22816957..22818044
RNA-Seq ExpressionCmc01g0023201
SyntenyCmc01g0023201
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0006325 - chromatin organization (biological process)
GO:0006534 - cysteine metabolic process (biological process)
GO:0007049 - cell cycle (biological process)
GO:0016575 - histone deacetylation (biological process)
GO:0051301 - cell division (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004407 - histone deacetylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0031071 - cysteine desulfurase activity (molecular function)
InterPro domainsIPR000192 - Aminotransferase class V domain
IPR015421 - Pyridoxal phosphate-dependent transferase, major domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042103.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]2.3e-4693.33Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL
        I + + +ATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSA+IPWQPVAKRTGVVQKFVSLGEHDVPNLLNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL

Query:  SFGLL
        SFGLL
Subjt:  SFGLL

KAA0061747.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]1.1e-3583.51Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL
        I + + +ATDEYERARKKVASFINAGDAKEI FTRNATEAINLVAYSWGL NLKSEDEIIL V E HSAI+PWQ VA+RTG V KFVSLGEHDVPNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL

TYJ96087.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]1.1e-3583.51Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL
        I + + +ATDEYERARKKVASFINAGDAKEI FTRNATEAINLVAYSWGL NLKSEDEIIL V E HSAI+PWQ VA+RTG V KFVSLGEHDVPNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL

TYK18046.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]1.7e-3692.13Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSL
        I + + +ATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSA+IPWQPVAKRTGVVQKFVSL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSL

XP_008449615.1 PREDICTED: cysteine desulfurase 1, chloroplastic-like [Cucumis melo]1.1e-3583.51Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL
        I + + +ATDEYERARKKVASFINAGDAKEI FTRNATEAINLVAYSWGL NLKSEDEIIL V E HSAI+PWQ VA+RTG V KFVSLGEHDVPNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL

TrEMBL top hitse value%identityAlignment
A0A1S3BLT6 Cysteine desulfurase5.2e-3683.51Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL
        I + + +ATDEYERARKKVASFINAGDAKEI FTRNATEAINLVAYSWGL NLKSEDEIIL V E HSAI+PWQ VA+RTG V KFVSLGEHDVPNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL

A0A5A7TFV7 Cysteine desulfurase 11.1e-4693.33Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL
        I + + +ATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSA+IPWQPVAKRTGVVQKFVSLGEHDVPNLLNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL

Query:  SFGLL
        SFGLL
Subjt:  SFGLL

A0A5A7V4C2 B-like cyclin5.2e-3683.51Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL
        I + + +ATDEYERARKKVASFINAGDAKEI FTRNATEAINLVAYSWGL NLKSEDEIIL V E HSAI+PWQ VA+RTG V KFVSLGEHDVPNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL

A0A5D3BAD5 B-like cyclin5.2e-3683.51Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL
        I + + +ATDEYERARKKVASFINAGDAKEI FTRNATEAINLVAYSWGL NLKSEDEIIL V E HSAI+PWQ VA+RTG V KFVSLGEHDVPNL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNL

A0A5D3D3R7 Cysteine desulfurase 18.1e-3792.13Show/hide
Query:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSL
        I + + +ATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSA+IPWQPVAKRTGVVQKFVSL
Subjt:  IMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSL

SwissProt top hitse value%identityAlignment
O32975 Probable cysteine desulfurase 17.6e-1645.83Show/hide
Query:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNLSF
        RATD YE AR+    FI A  A+EI F R  TEAINLVAY+WG  +L+  DE+++  +E H+ I+PWQ ++ +TG + K   +   D  NLL   F
Subjt:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNLSF

Q55793 Probable cysteine desulfurase1.5e-2462.92Show/hide
Query:  TLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHD
        ++RATD YE  R KVA FINA   +EI +TRNATEAINLVAYSWG+ NLK+ DEII  V+E HS ++PWQ VA +TG V KFV L E +
Subjt:  TLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHD

Q93WX6 Cysteine desulfurase 1, chloroplastic4.6e-2967.02Show/hide
Query:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL
        +ATDE+E ARKKVA FINA D++EI FTRNATEAINLVAYSWGL NLK  DE+IL V E HS I+PWQ V+++TG V KFV+L E +VP++  L
Subjt:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL

Q9K7A0 Probable cysteine desulfurase7.6e-1653.66Show/hide
Query:  ATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSL
        ATD YE AR+K+  FI+A   +EI FTR  T AINLVA S+G  NL   DEI++  +E HS IIPWQ VAK TG    ++ L
Subjt:  ATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSL

Q9KII6 Probable cysteine desulfurase4.4e-1647Show/hide
Query:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNLSF-GLL
        RATD YE AR  VA FI A  +  I F R  TEAINLVA++WG  +L+  DEI++  +E H+ I+PWQ ++++TG + K   +   D  NLL   F GLL
Subjt:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNLSF-GLL

Arabidopsis top hitse value%identityAlignment
AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase3.2e-3067.02Show/hide
Query:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL
        +ATDE+E ARKKVA FINA D++EI FTRNATEAINLVAYSWGL NLK  DE+IL V E HS I+PWQ V+++TG V KFV+L E +VP++  L
Subjt:  RATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPNLLNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTGCAGAATTATTATGAGGCTTCCAACTCAAATGTGCATCATGGCATACACTCTTCGAGCAACTGATGAGTATGAGCGGGCAAGGAAGAAAGTTGCGTCCTTTAT
CAATGCTGGAGATGCTAAAGAGATCGATTTTACCAGGAATGCAACTGAAGCTATCAATCTAGTGGCTTATTCTTGGGGCTTAGTGAATTTGAAATCGGAAGATGAGATCA
TACTTATGGTTGTTGAACTTCATAGTGCCATTATTCCTTGGCAACCTGTAGCTAAAAGGACTGGTGTTGTTCAGAAGTTTGTAAGTTTAGGTGAACATGATGTCCCAAAC
TTACTAAATTTATCTTTTGGATTATTGTAA
mRNA sequenceShow/hide mRNA sequence
GTCTGTTTCGTTGTTATCAACACTTCATGTGGTGGTGTTAATGGTTGTATTGCTATCTGCAAGAAGTAAATGGCTCCAAGCTTGTCTACTTAGACAACGCTGCCACTTCT
CAGAAACCAATTTCTGTGTTGAATGCTTTGCAGAATTATTATGAGGCTTCCAACTCAAATGTGCATCATGGCATACACTCTTCGAGCAACTGATGAGTATGAGCGGGCAA
GGAAGAAAGTTGCGTCCTTTATCAATGCTGGAGATGCTAAAGAGATCGATTTTACCAGGAATGCAACTGAAGCTATCAATCTAGTGGCTTATTCTTGGGGCTTAGTGAAT
TTGAAATCGGAAGATGAGATCATACTTATGGTTGTTGAACTTCATAGTGCCATTATTCCTTGGCAACCTGTAGCTAAAAGGACTGGTGTTGTTCAGAAGTTTGTAAGTTT
AGGTGAACATGATGTCCCAAACTTACTAAATTTATCTTTTGGATTATTGTAA
Protein sequenceShow/hide protein sequence
MLCRIIMRLPTQMCIMAYTLRATDEYERARKKVASFINAGDAKEIDFTRNATEAINLVAYSWGLVNLKSEDEIILMVVELHSAIIPWQPVAKRTGVVQKFVSLGEHDVPN
LLNLSFGLL