CuGenDBv2

Gene ID	Cmc01g0023281
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:22938569..22940731
RNA-Seq Expression	Cmc01g0023281
Synteny	Cmc01g0023281
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031931.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.72

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        +RA+KLLSQGTW ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE+EF IELEPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPS+S
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSM LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKT FRSRYGHYEFI+MSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HL +V+QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFSRIA PLTQLTRK APFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF                            LK+HEQNYPT
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEILYHPSK NVV DALSRKVSHSAALITR APLHRD ERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVT QLAQLTVQ TLRQ+IIDAQG+DPYL EKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR
        YWW NMKREV +FVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWEN+SMDFITGLPRTLR F VIWVVVDRLTKSAHF+PGKSTYTASKWAQLYM EIVR
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR

Query:  LHGVPVSIVSDRDARFTSKF
        LHGVPVSIV DRDARFTSKF
Subjt:  LHGVPVSIVSDRDARFTSKF

KAA0042118.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.42

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        MRANKLLSQGTWSILASVVDTREVDVS SSE VVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPY+MAP ELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSMHLCIDY+ELNKVTIKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTVFRSRYGHYEFIM+SFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI+SKTEAEHEGHL +VMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFS IATPLTQLTRK APFVWSKACED+FQNLKQKLVTALVLT+PDGSGSF                            LKNHEQNY T
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSK NVVVDALSR VSHSAALITRHAPLHRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYL EKRGLAEAGQ VEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK
        YWWCNMKREVT+FVSKCLVCQQVKAPRQK AGLLQPLSVPEWKWENVSMDFITG           L RTLR FTVIWVVV+RLTKSAHFIPGKSTYTASK
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK

Query:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF
        WAQLYM EIVRLHGV VSIVSD+DARFTSKF
Subjt:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.44

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Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        +RA+KLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EF IELEPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSM LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKT FRSRYGHYEFI+MSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HL +V+QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF                            LK+HEQNYPT
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEILYHP K NVV DALSRKVSHSAALITR APLHRD ERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQ+IIDAQ +DPYL EKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR
        YWW NMKREV +FVS+CLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMDFITGLPRTLR FTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYM EIVR
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR

Query:  LHGVPVSIVSDRDARFTSKF
        LHGVPVSIVSDRDARFTSKF
Subjt:  LHGVPVSIVSDRDARFTSKF

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.58

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        +RA+KLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EF IELEPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSM LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKT FRSRYGHYEFI+MSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HL +V+QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQ LKQKLVTA VLTVPDGSGSF                            LK+HEQNYPT
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEILYHP K NVV DALSRKVSHSAALITR APLHRD ERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQ+IIDAQ +DPYL EKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR
        YWW NMKREV +FVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMDFITGLPRTLR FTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYM EIVR
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR

Query:  LHGVPVSIVSDRDARFTSKF
        LHGVPVSIVSDRDARFTSKF
Subjt:  LHGVPVSIVSDRDARFTSKF

TYK18061.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.42

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        MRANKLLSQGTWSILASVVDTREVDVS SSE VVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPY+MAP ELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSMHLCIDY+ELNKVTIKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTVFRSRYGHYEFIM+SFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI+SKTEAEHEGHL +VMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFS IATPLTQLTRK APFVWSKACED+FQNLKQKLVTALVLT+PDGSGSF                            LKNHEQNY T
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSK NVVVDALSR VSHSAALITRHAPLHRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYL EKRGLAEAGQ VEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK
        YWWCNMKREVT+FVSKCLVCQQVKAPRQK AGLLQPLSVPEWKWENVSMDFITG           L RTLR FTVIWVVV+RLTKSAHFIPGKSTYTASK
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK

Query:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF
        WAQLYM EIVRLHGV VSIVSD+DARFTSKF
Subjt:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

0.0e+00

89.72

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        +RA+KLLSQGTW ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE+EF IELEPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPS+S
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSM LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKT FRSRYGHYEFI+MSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HL +V+QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFSRIA PLTQLTRK APFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF                            LK+HEQNYPT
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEILYHPSK NVV DALSRKVSHSAALITR APLHRD ERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVT QLAQLTVQ TLRQ+IIDAQG+DPYL EKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR
        YWW NMKREV +FVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWEN+SMDFITGLPRTLR F VIWVVVDRLTKSAHF+PGKSTYTASKWAQLYM EIVR
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR

Query:  LHGVPVSIVSDRDARFTSKF
        LHGVPVSIV DRDARFTSKF
Subjt:  LHGVPVSIVSDRDARFTSKF

A0A5A7TH12 Reverse transcriptase

0.0e+00

90.42

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        MRANKLLSQGTWSILASVVDTREVDVS SSE VVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPY+MAP ELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSMHLCIDY+ELNKVTIKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTVFRSRYGHYEFIM+SFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI+SKTEAEHEGHL +VMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFS IATPLTQLTRK APFVWSKACED+FQNLKQKLVTALVLT+PDGSGSF                            LKNHEQNY T
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSK NVVVDALSR VSHSAALITRHAPLHRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYL EKRGLAEAGQ VEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK
        YWWCNMKREVT+FVSKCLVCQQVKAPRQK AGLLQPLSVPEWKWENVSMDFITG           L RTLR FTVIWVVV+RLTKSAHFIPGKSTYTASK
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK

Query:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF
        WAQLYM EIVRLHGV VSIVSD+DARFTSKF
Subjt:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF

A0A5A7U330 Reverse transcriptase

0.0e+00

89.44

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        +RA+KLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EF IELEPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSM LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKT FRSRYGHYEFI+MSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HL +V+QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF                            LK+HEQNYPT
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEILYHP K NVV DALSRKVSHSAALITR APLHRD ERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQ+IIDAQ +DPYL EKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR
        YWW NMKREV +FVS+CLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMDFITGLPRTLR FTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYM EIVR
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR

Query:  LHGVPVSIVSDRDARFTSKF
        LHGVPVSIVSDRDARFTSKF
Subjt:  LHGVPVSIVSDRDARFTSKF

A0A5D3BPI1 Reverse transcriptase

0.0e+00

89.58

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        +RA+KLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EF IELEPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSM LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKT FRSRYGHYEFI+MSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HL +V+QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFSRIATPLTQLTRK APFVWSKACEDSFQ LKQKLVTA VLTVPDGSGSF                            LK+HEQNYPT
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEILYHP K NVV DALSRKVSHSAALITR APLHRD ERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQ+IIDAQ +DPYL EKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR
        YWW NMKREV +FVSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSMDFITGLPRTLR FTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYM EIVR
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVR

Query:  LHGVPVSIVSDRDARFTSKF
        LHGVPVSIVSDRDARFTSKF
Subjt:  LHGVPVSIVSDRDARFTSKF

A0A5D3D1D7 Reverse transcriptase

0.0e+00

90.42

Show/hide

Query:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS
        MRANKLLSQGTWSILASVVDTREVDVS SSE VVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPY+MAP ELKELKVQLQELLDKGFIRPSVS
Subjt:  MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM
        PWGAPVLFVKKKDGSMHLCIDY+ELNKVTIKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTVFRSRYGHYEFIM+SFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILI+SKTEAEHEGHL +VMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFL

Query:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT
        GLA YYRRFVENFS IATPLTQLTRK APFVWSKACED+FQNLKQKLVTALVLT+PDGSGSF                            LKNHEQNY T
Subjt:  GLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF----------------------------LKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI
        HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSK NVVVDALSR VSHSAALITRHAPLHRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEI

Query:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYL EKRGLAEAGQ VEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV

Query:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK
        YWWCNMKREVT+FVSKCLVCQQVKAPRQK AGLLQPLSVPEWKWENVSMDFITG           L RTLR FTVIWVVV+RLTKSAHFIPGKSTYTASK
Subjt:  YWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITG-----------LPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASK

Query:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF
        WAQLYM EIVRLHGV VSIVSD+DARFTSKF
Subjt:  WAQLYMFEIVRLHGVPVSIVSDRDARFTSKF

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.6e-97

30.67

Show/hide

Query:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT
          ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E+++M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH  H+  V+Q 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     ID V  W +P    E+R FLG  +Y R+F+   S++  PL  L +K+  + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN

Query:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY
        +KQ LV+  VL   D S   L               + H+                   NY   D E+ A++ +LK WRHYL    +  +I TDH++L  
Subjt:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY
          T +    N R  RW   ++D++ EI Y P   N + DALSR       ++    P+ +D E   I          + Q+++    + +++    +D  
Subjt:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY

Query:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA
        L     L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK
        G LQP+   E  WE++SMDFIT LP +   +  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK

P0CT35 Transposon Tf2-2 polyprotein

1.6e-97

30.67

Show/hide

Query:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT
          ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E+++M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH  H+  V+Q 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     ID V  W +P    E+R FLG  +Y R+F+   S++  PL  L +K+  + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN

Query:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY
        +KQ LV+  VL   D S   L               + H+                   NY   D E+ A++ +LK WRHYL    +  +I TDH++L  
Subjt:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY
          T +    N R  RW   ++D++ EI Y P   N + DALSR       ++    P+ +D E   I          + Q+++    + +++    +D  
Subjt:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY

Query:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA
        L     L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK
        G LQP+   E  WE++SMDFIT LP +   +  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK

P0CT36 Transposon Tf2-3 polyprotein

1.6e-97

30.67

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Query:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT
          ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E+++M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH  H+  V+Q 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     ID V  W +P    E+R FLG  +Y R+F+   S++  PL  L +K+  + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN

Query:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY
        +KQ LV+  VL   D S   L               + H+                   NY   D E+ A++ +LK WRHYL    +  +I TDH++L  
Subjt:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY
          T +    N R  RW   ++D++ EI Y P   N + DALSR       ++    P+ +D E   I          + Q+++    + +++    +D  
Subjt:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY

Query:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA
        L     L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK
        G LQP+   E  WE++SMDFIT LP +   +  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK

P0CT37 Transposon Tf2-4 polyprotein

1.6e-97

30.67

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Query:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT
          ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E+++M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH  H+  V+Q 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     ID V  W +P    E+R FLG  +Y R+F+   S++  PL  L +K+  + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN

Query:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY
        +KQ LV+  VL   D S   L               + H+                   NY   D E+ A++ +LK WRHYL    +  +I TDH++L  
Subjt:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY
          T +    N R  RW   ++D++ EI Y P   N + DALSR       ++    P+ +D E   I          + Q+++    + +++    +D  
Subjt:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY

Query:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA
        L     L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK
        G LQP+   E  WE++SMDFIT LP +   +  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK

P0CT41 Transposon Tf2-12 polyprotein

1.6e-97

30.67

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Query:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT
          ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E+++M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH  H+  V+Q 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEGHLCLVMQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     ID V  W +P    E+R FLG  +Y R+F+   S++  PL  L +K+  + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVWSKACEDSFQN

Query:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY
        +KQ LV+  VL   D S   L               + H+                   NY   D E+ A++ +LK WRHYL    +  +I TDH++L  
Subjt:  LKQKLVTALVLTVPDGSGSFL---------------KNHEQ------------------NYPTHDLELAAVVFALKIWRHYLYG--KKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY
          T +    N R  RW   ++D++ EI Y P   N + DALSR       ++    P+ +D E   I          + Q+++    + +++    +D  
Subjt:  FFTQKE--LNMRQRRWLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPY

Query:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA
        L     L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK
        G LQP+   E  WE++SMDFIT LP +   +  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FTS+
Subjt:  GLLQPLSVPEWKWENVSMDFITGLPRTLRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.8e-24

42.4

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Query:  HLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVW
        HL +V+Q    ++ YA   KC F   Q+++LG  H++S  GVS DPAK++A+  WP P   +E+R FLGL  YYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSRIATPLTQLTRKEAPFVW

Query:  SKACEDSFQNLKQKLVTALVLTVPD
        ++    +F+ LK  + T  VL +PD
Subjt:  SKACEDSFQNLKQKLVTALVLTVPD

Sequences

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CDS sequence

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ATGAGGGCCAACAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGATGTATCCCTGTCATCAGAACCAGTGGTAAGG
GACTATCCAGATGTTTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGTCATAGAGCTGGAGCCAGGTACGGTTCCTATATCCAGAGCT
CCATACAAAATGGCCCCAGCAGAATTGAAAGAGCTGAAAGTGCAGTTACAGGAGTTGCTCGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCA
GTTTTATTTGTTAAGAAGAAGGATGGATCGATGCACCTATGCATTGACTATCGGGAGTTGAATAAGGTAACCATTAAGAACAGATATCCCTTGCCTAGGATCGAC
GATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGAGATACCATCAGCTGAGGATTAAGGACGGTGATGTACCGAAGACAGTC
TTTCGTTCCAGATACGGACACTATGAGTTTATTATGATGTCTTTTGGTTTGACGAATGCTCCGGTAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTC
CTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACAGAGGCTGAGCATGAGGGGCATTTATGTTTGGTTATGCAAACCCTTCGGGAT
AATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTCTAGGTCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAG
ATAGATGCAGTCACCAGTTGGCCCCGACCTTCCACGGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCCAGTTATTATCGACGATTTGTGGAGAACTTTTCCCGT
ATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGAAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTTCAGAACCTTAAACAGAAGCTAGTTACTGCA
CTAGTTCTTACGGTACCTGATGGTTCAGGGAGTTTTTTGAAGAATCATGAGCAGAATTACCCTACACATGATTTAGAGTTGGCAGCAGTAGTTTTTGCATTGAAG
ATATGGAGGCACTACTTGTATGGAAAAAAGATACAAATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGA
TGGCTTCAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAAGCAAGACGAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTATCGCATTCAGCAGCA
CTTATTACCCGACATGCCCCTTTGCATCGAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACCATGCAGTTAGCCCAGTTGACGGTACAGCCG
ACTTTGAGGCAGAAGATCATTGATGCTCAGGGTCACGATCCTTATTTGGCAGAGAAGCGTGGCCTAGCAGAAGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCT
GATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTGTTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCG
GGTAGCACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGTGTAATATGAAGAGAGAGGTGACGAAGTTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTT
AAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCGTACCAGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACGGGACTGCCTAGAACT
CTGAGGGATTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCACACTTCATTCCGGGTAAATCGACCTATACTGCTAGTAAGTGGGCACAGTTG
TACATGTTTGAGATAGTGAGACTTCATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGGTTCACTTCCAAATTCTAG

mRNA sequence

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Protein sequence

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MRANKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFVIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAP
VLFVKKKDGSMHLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTVFRSRYGHYEFIMMSFGLTNAPVVFMDLMNRVFREF
LDTFVIVFIDDILIYSKTEAEHEGHLCLVMQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIDAVTSWPRPSTVSEVRSFLGLASYYRRFVENFSR
IATPLTQLTRKEAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFLKNHEQNYPTHDLELAAVVFALKIWRHYLYGKKIQIFTDHKSLKYFFTQKELNMRQRR
WLQLVKDYDCEILYHPSKTNVVVDALSRKVSHSAALITRHAPLHRDFERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQGHDPYLAEKRGLAEAGQAVEFSISS
DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVTKFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRT
LRDFTVIWVVVDRLTKSAHFIPGKSTYTASKWAQLYMFEIVRLHGVPVSIVSDRDARFTSKF

Cmc01g0023281 (gene) of Melon (Charmono) v1.1 genome