; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0023331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0023331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr01:23051435..23052136
RNA-Seq ExpressionCmc01g0023331
SyntenyCmc01g0023331
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042128.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-12797.84Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEM GLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLK T
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQRDMQRIFD MLHKHIECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.0e-12294.4Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKH+ECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]7.8e-12394.83Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKHIECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

TYK16275.1 uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa]1.0e-12294.4Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKH+ECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.0e-12294.4Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKH+ECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

TrEMBL top hitse value%identityAlignment
A0A5A7TH26 Ty3-gypsy retrotransposon protein5.1e-12897.84Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEM GLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLK T
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQRDMQRIFD MLHKHIECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

A0A5A7TZU9 Ribonuclease H5.0e-12394.4Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKH+ECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

A0A5D3BIH8 Uncharacterized protein3.8e-12394.83Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKHIECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

A0A5D3CXS1 Uncharacterized protein5.0e-12394.4Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKH+ECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

A0A5D3D1E5 Ribonuclease H5.0e-12394.4Show/hide
Query:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR
        IDELKEVNLGTKEEPRPTFISTQLS+NDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEH PVKQAQRRFRPELISQIEEEVNKLIEAGFIR
Subjt:  IDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIR

Query:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT
        EVKYPTWIANIVPVR+KNGQLRV VDFRDLNNAC KD+FPLPIMEIMIDATA HEALSFMDGSSGYNQIRMAL+DEEKTAFRT KGIYCYKVMPFGLKN 
Subjt:  EVKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNT

Query:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK
        GATYQR MQRIFDDMLHKH+ECYVD+LVVKSK
Subjt:  GATYQRDMQRIFDDMLHKHIECYVDNLVVKSK

SwissProt top hitse value%identityAlignment
P0CT41 Transposon Tf2-12 polyprotein3.4e-2028.02Show/hide
Query:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV
        E E  ++ K +KD+ A +  E      K     + +  E++ +        P  +  + +E+N+ +++G IRE K      N  PV    +K G LR+ V
Subjt:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV

Query:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD
        D++ LN   + + +PLP++E ++         + +D  S Y+ IR+   DE K AFR  +G++ Y VMP+G+    A +Q  +  I  +    H+ CY+D
Subjt:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD

Query:  NLVVKSK
        ++++ SK
Subjt:  NLVVKSK

P0CT42 Transposon Tf2-7 polyprotein1.2e-2028.5Show/hide
Query:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV
        E E  ++ K +KD+ A +  E      K     + +  E++ +        P  +  + +E+N+ +++G IRE K      N  PV    +K G LR+ V
Subjt:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV

Query:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD
        D++ LN   + + +PLP++E ++         + +D  S Y+ IR+   DE K AFR  +G++ Y VMP+G+    A +Q  +  I  ++   H+ CY+D
Subjt:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD

Query:  NLVVKSK
        N+++ SK
Subjt:  NLVVKSK

P0CT43 Transposon Tf2-8 polyprotein1.2e-2028.5Show/hide
Query:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV
        E E  ++ K +KD+ A +  E      K     + +  E++ +        P  +  + +E+N+ +++G IRE K      N  PV    +K G LR+ V
Subjt:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV

Query:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD
        D++ LN   + + +PLP++E ++         + +D  S Y+ IR+   DE K AFR  +G++ Y VMP+G+    A +Q  +  I  ++   H+ CY+D
Subjt:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD

Query:  NLVVKSK
        N+++ SK
Subjt:  NLVVKSK

P20825 Retrovirus-related Pol polyprotein from transposon 2975.3e-2131.25Show/hide
Query:  HRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIRE----VKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHE
        H   I  + +P+ Q           ++E +V +++  G IRE       PTW+    P      + RV +D+R LN     D +P+P M+ ++    + +
Subjt:  HRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIRE----VKYPTWIANIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHE

Query:  ALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVDNLVVKS
          + +D + G++QI M  +   KTAF T  G Y Y  MPFGL+N  AT+QR M  I   +L+KH   Y+D++++ S
Subjt:  ALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVDNLVVKS

Q9UR07 Transposon Tf2-11 polyprotein1.2e-2028.5Show/hide
Query:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV
        E E  ++ K +KD+ A +  E      K     + +  E++ +        P  +  + +E+N+ +++G IRE K      N  PV    +K G LR+ V
Subjt:  ENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIANIVPVR---EKNGQLRVYV

Query:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD
        D++ LN   + + +PLP++E ++         + +D  S Y+ IR+   DE K AFR  +G++ Y VMP+G+    A +Q  +  I  ++   H+ CY+D
Subjt:  DFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKHIECYVD

Query:  NLVVKSK
        N+++ SK
Subjt:  NLVVKSK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGACGAGTTAAAAGAAGTCAATCTTGGTACGAAAGAAGAACCTCGTCCAACCTTCATAAGCACCCAACTTTCTAACAATGATGAAAATGAGTATGTAAACTTACT
CAAAGCATATAAAGATGTCTTTGCATGGTCATATAAGGAAATGCCTGGACTCGATCCAAAGGTGGCCGTTCATCGCTTAGCGATCAAACCAGAGCATTGGCCAGTCAAGC
AAGCCCAACGACGATTTCGACCAGAACTCATTTCTCAAATCGAGGAAGAGGTAAATAAGCTCATTGAGGCTGGATTTATTCGTGAAGTCAAGTACCCAACATGGATAGCT
AATATTGTTCCCGTAAGGGAGAAGAATGGCCAACTACGTGTTTATGTCGATTTTCGCGACCTAAATAACGCATGCCAAAAAGATAACTTTCCTTTGCCTATCATGGAAAT
CATGATAGATGCAACTGCACGGCATGAAGCTTTATCTTTCATGGATGGGTCGTCAGGATATAATCAGATTAGAATGGCTCTAGATGACGAGGAGAAAACAGCATTTCGAA
CTCTAAAAGGTATATACTGTTATAAGGTAATGCCTTTCGGATTGAAAAATACAGGTGCTACATACCAGCGCGATATGCAAAGGATTTTTGATGATATGCTGCATAAACAC
ATTGAATGTTATGTTGACAATCTCGTAGTCAAGTCCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGACGAGTTAAAAGAAGTCAATCTTGGTACGAAAGAAGAACCTCGTCCAACCTTCATAAGCACCCAACTTTCTAACAATGATGAAAATGAGTATGTAAACTTACT
CAAAGCATATAAAGATGTCTTTGCATGGTCATATAAGGAAATGCCTGGACTCGATCCAAAGGTGGCCGTTCATCGCTTAGCGATCAAACCAGAGCATTGGCCAGTCAAGC
AAGCCCAACGACGATTTCGACCAGAACTCATTTCTCAAATCGAGGAAGAGGTAAATAAGCTCATTGAGGCTGGATTTATTCGTGAAGTCAAGTACCCAACATGGATAGCT
AATATTGTTCCCGTAAGGGAGAAGAATGGCCAACTACGTGTTTATGTCGATTTTCGCGACCTAAATAACGCATGCCAAAAAGATAACTTTCCTTTGCCTATCATGGAAAT
CATGATAGATGCAACTGCACGGCATGAAGCTTTATCTTTCATGGATGGGTCGTCAGGATATAATCAGATTAGAATGGCTCTAGATGACGAGGAGAAAACAGCATTTCGAA
CTCTAAAAGGTATATACTGTTATAAGGTAATGCCTTTCGGATTGAAAAATACAGGTGCTACATACCAGCGCGATATGCAAAGGATTTTTGATGATATGCTGCATAAACAC
ATTGAATGTTATGTTGACAATCTCGTAGTCAAGTCCAAGTAG
Protein sequenceShow/hide protein sequence
MIDELKEVNLGTKEEPRPTFISTQLSNNDENEYVNLLKAYKDVFAWSYKEMPGLDPKVAVHRLAIKPEHWPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA
NIVPVREKNGQLRVYVDFRDLNNACQKDNFPLPIMEIMIDATARHEALSFMDGSSGYNQIRMALDDEEKTAFRTLKGIYCYKVMPFGLKNTGATYQRDMQRIFDDMLHKH
IECYVDNLVVKSK