CuGenDBv2

Gene ID	Cmc01g0023461
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:23299409..23301441
RNA-Seq Expression	Cmc01g0023461
Synteny	Cmc01g0023461
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.91

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSDASKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS +KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQ AMGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.47

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSDASKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSA+KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

KAA0059062.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.98

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQIEAVTGWTRPST
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSK      +IEAVTGWT PST
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQIEAVTGWTRPST

Query:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK
        VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK
Subjt:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK

Query:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV-------------------APLH
        SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV                   APLH
Subjt:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV-------------------APLH

Query:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTK
        RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTK
Subjt:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTK

Query:  MYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQ
        MYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA+
Subjt:  MYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQ

Query:  LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ A GTRLDFSTAFHPQTDGQTERLN
Subjt:  LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

KAA0062112.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.91

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSD SKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSA+KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYT+SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ +MGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.91

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+ LKQKLVTAPVLTVPDG GSFVIYSDASKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSA+KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U330 Reverse transcriptase

0.0e+00

92.91

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSDASKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS +KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQ AMGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

A0A5A7UP94 Pol protein

0.0e+00

92.47

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSDASKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSA+KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

A0A5A7UT37 Reverse transcriptase

0.0e+00

94.98

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQIEAVTGWTRPST
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSK      +IEAVTGWT PST
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQIEAVTGWTRPST

Query:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK
        VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK
Subjt:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK

Query:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV-------------------APLH
        SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV                   APLH
Subjt:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV-------------------APLH

Query:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTK
        RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTK
Subjt:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTK

Query:  MYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQ
        MYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA+
Subjt:  MYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQ

Query:  LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ A GTRLDFSTAFHPQTDGQTERLN
Subjt:  LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

A0A5A7V1N3 Reverse transcriptase

0.0e+00

92.91

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDG GSFVIYSD SKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSA+KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYT+SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ +MGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

A0A5D3BPI1 Reverse transcriptase

0.0e+00

92.91

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQ            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF+ LKQKLVTAPVLTVPDG GSFVIYSDASKKGL
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV    
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANV----

Query:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT
                       APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSA+KT
Subjt:  ---------------APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDGQTERLN
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.1e-108

32.75

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   Q            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D     ++ +DAS   +
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS
        G AN              P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+
Subjt:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS

Query:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV
         +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVV
Subjt:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV

Query:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        DR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Subjt:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

P0CT35 Transposon Tf2-2 polyprotein

3.1e-108

32.75

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   Q            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D     ++ +DAS   +
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS
        G AN              P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+
Subjt:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS

Query:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV
         +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVV
Subjt:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV

Query:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        DR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Subjt:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

P0CT36 Transposon Tf2-3 polyprotein

3.1e-108

32.75

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   Q            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D     ++ +DAS   +
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS
        G AN              P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+
Subjt:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS

Query:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV
         +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVV
Subjt:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV

Query:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        DR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Subjt:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

P0CT37 Transposon Tf2-4 polyprotein

3.1e-108

32.75

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   Q            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D     ++ +DAS   +
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS
        G AN              P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+
Subjt:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS

Query:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV
         +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVV
Subjt:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV

Query:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        DR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Subjt:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

P0CT41 Transposon Tf2-12 polyprotein

3.1e-108

32.75

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   Q            
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQ------------

Query:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL
               I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D     ++ +DAS   +
Subjt:  -------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFADHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS
        G AN              P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+
Subjt:  GKAN------------VAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDS

Query:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV
         +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVV
Subjt:  AIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVV

Query:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN
        DR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Subjt:  DRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.1e-18

39.2

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQI---------------------EAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   QI                     EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQI---------------------EAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFKNLKQKLVTAPVLTVPD
        ++    +FK LK  + T PVL +PD
Subjt:  SKACEDSFKNLKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTCGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATACGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGAAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGT
TTTGGCTGAAGCAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACTGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAAC
TTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCAAGAACCTTAAACAGAAGCTAGTTAC
CGCACCGGTTCTTACTGTACCTGATGGTTTTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTT
ATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAA
AAGATACAGATCTTCGCGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGA
GATACTGTATCATCCAGGCAAGGCAAATGTGGCCCCTTTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGA
CAGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTA
TCCTCGGATGGTGGACTTTTGTTTGAGAGACGCCTCTGCGTGCCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCC
AGGTAGCACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGG
CACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCAGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGT
TTTACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGAT
AGTGAGGTTGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGGCTGCTATGGGCACGAGGTTGGACTTTA
GTACGGCTTTCCATCCACAGACGGACGGTCAGACTGAGCGTCTGAACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN
FSRIATPLTQLTRKGAPFVWSKACEDSFKNLKQKLVTAPVLTVPDGFGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE
KIQIFADHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSL
SSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRG
FTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLN

Cmc01g0023461 (gene) of Melon (Charmono) v1.1 genome