| GenBank top hits | e value | %identity | Alignment |
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| KAA0036466.1 putative Polyprotein [Cucumis melo var. makuwa] | 1.3e-70 | 83.95 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
VKTAFLNGDLE EIYMEQ GFI+HDQESKVCKLDKFLYGLKQAPKQW EKFDNL+M KGFKVNESDKCIYYKTE RLC II LYVDDMLI GSNL+VIN
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+VKSM S NFD+KDL EA+VILGIKI RIEN ISLDQ HYIEKILKKYNYF+ KPAC P+ S
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 2.9e-70 | 78.21 | Show/hide |
Query: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
+LISIV LNNLLIHQ+ VKT FLNGDLE EIYMEQPEGFI+ QESKVCKLDK LYGLKQAPK+W +KFDNL+M KGFKVNES+KCIYYKT+ RLC II
Subjt: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
Query: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
LYVDDMLI GSNL++IN+VKSMLS NFD+KDL EA+VIL IKI R ENGI LDQ HYIEKILKKYNYF+SK A P+ S
Subjt: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| KAA0060459.1 hypothetical protein E6C27_scaffold22G002870 [Cucumis melo var. makuwa] | 1.3e-70 | 83.33 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
VKTAFLNGDLE EIYMEQPEGFI+H+QESKVCKLDK LYGLKQAPKQW EKFDNL+M KGFKVNESDKCIYYKTE RLC II LYVDDMLI GSNL+VIN
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+VKSMLS NFD+KDL EA+VILGIKI R ENGI LDQ HYIEK LKKYNYF+SKP C P+ S
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| KAA0066068.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.3e-70 | 82.1 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
VKTAFLNGDLE E YMEQPEGFI++DQESKVCKL K LYGLKQAPKQW EKFDNL+M KGFKVNESDKCIYYKTE RLC II LYVDDMLI GSNL++IN
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+VKSMLS NFD+KDL EA+VILGI+IIR ENGISL Q HYIEKILKKYNYF+SKP C P+ S
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| TYK11906.1 putative Polyprotein [Cucumis melo var. makuwa] | 2.9e-70 | 79.33 | Show/hide |
Query: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
+LISI ALNNLLIHQ+ VKTAFLN DLE EIYM+Q EGFI+H QESKVCKLDK LYGLKQA KQW EKFDNL M KGFKVNESDKCIYYK E RLC II
Subjt: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
Query: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
LYVDDMLI GSNL+V+N+VKSM S N D+KDL EANVILGIKI R ENGI LDQ HYIEKILKKYNYF+SKPA P+ S
Subjt: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass | 1.4e-70 | 78.21 | Show/hide |
Query: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
+LISIV LNNLLIHQ+ VKT FLNGDLE EIYMEQPEGFI+ QESKVCKLDK LYGLKQAPK+W +KFDNL+M KGFKVNES+KCIYYKT+ RLC II
Subjt: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
Query: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
LYVDDMLI GSNL++IN+VKSMLS NFD+KDL EA+VIL IKI R ENGI LDQ HYIEKILKKYNYF+SK A P+ S
Subjt: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| A0A5D3BJM0 Putative Polyprotein | 6.2e-71 | 83.95 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
VKTAFLNGDLE EIYMEQ GFI+HDQESKVCKLDKFLYGLKQAPKQW EKFDNL+M KGFKVNESDKCIYYKTE RLC II LYVDDMLI GSNL+VIN
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+VKSM S NFD+KDL EA+VILGIKI RIEN ISLDQ HYIEKILKKYNYF+ KPAC P+ S
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| A0A5D3BLH3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.0e-70 | 82.1 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
VKTAFLNGDLE E YMEQPEGFI++DQESKVCKL K LYGLKQAPKQW EKFDNL+M KGFKVNESDKCIYYKTE RLC II LYVDDMLI GSNL++IN
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+VKSMLS NFD+KDL EA+VILGI+IIR ENGISL Q HYIEKILKKYNYF+SKP C P+ S
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| A0A5D3CNA1 Putative Polyprotein | 1.4e-70 | 79.33 | Show/hide |
Query: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
+LISI ALNNLLIHQ+ VKTAFLN DLE EIYM+Q EGFI+H QESKVCKLDK LYGLKQA KQW EKFDNL M KGFKVNESDKCIYYK E RLC II
Subjt: MLISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIR
Query: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
LYVDDMLI GSNL+V+N+VKSM S N D+KDL EANVILGIKI R ENGI LDQ HYIEKILKKYNYF+SKPA P+ S
Subjt: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| A0A5D3D4T4 Reverse transcriptase Ty1/copia-type domain-containing protein | 6.2e-71 | 83.33 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
VKTAFLNGDLE EIYMEQPEGFI+H+QESKVCKLDK LYGLKQAPKQW EKFDNL+M KGFKVNESDKCIYYKTE RLC II LYVDDMLI GSNL+VIN
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+VKSMLS NFD+KDL EA+VILGIKI R ENGI LDQ HYIEK LKKYNYF+SKP C P+ S
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.5e-24 | 38.89 | Show/hide |
Query: LISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRL--CTII
++S+V NL +HQ+ VKTAFLNG L+ EIYM P+G I VCKL+K +YGLKQA + W E F+ + F + D+CIY + + +
Subjt: LISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRL--CTII
Query: RLYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
LYVDD++I+ ++ +NN K L F + DL E +GI+I E+ I L Q Y++KIL K+N P S
Subjt: RLYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-35 | 45.16 | Show/hide |
Query: LISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKT-EDRLCTIIR
++S+ A +L + Q+ VKTAFL+GDLE EIYMEQPEGF + ++ VCKL+K LYGLKQAP+QW KFD+ + + + SD C+Y+K + I+
Subjt: LISIVALNNLLIHQI-VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKT-EDRLCTIIR
Query: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKII--RIENGISLDQFHYIEKILKKYNYFESKPACAPFGSILDIA
LYVDDMLI G + +I +K LS +FD+KDL A ILG+KI+ R + L Q YIE++L+++N +KP P L ++
Subjt: LYVDDMLISGSNLYVINNVKSMLSGNFDIKDLREANVILGIKII--RIENGISLDQFHYIEKILKKYNYFESKPACAPFGSILDIA
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.5e-16 | 34.72 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
V TAFLN ++ IY++QP GF+ V +L +YGLKQAP W E +N + GF +E + +Y+++ I +YVDD+L++ + + +
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENG-ISLDQFHYIEK
VK L+ + +KDL + + LG+ I + NG I+L YI K
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENG-ISLDQFHYIEK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.9e-26 | 38.36 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
V AFL G L ++YM QP GFI D+ + VCKL K LYGLKQAP+ W + N ++ GF + SD ++ + + +YVDD+LI+G++ +++
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAP
N LS F +KD E + LGI+ R+ G+ L Q YI +L + N +KP P
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-23 | 33.95 | Show/hide |
Query: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
V AFL G L E+YM QP GF+ D+ VC+L K +YGLKQAP+ W + ++ GF + SD ++ R + +YVDD+LI+G++ ++
Subjt: VKTAFLNGDLEGEIYMEQPEGFIIHDQESKVCKLDKFLYGLKQAPKQWREKFDNLIMFKGFKVNESDKCIYYKTEDRLCTIIRLYVDDMLISGSNLYVIN
Query: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
+ LS F +K+ + + LGI+ R+ G+ L Q Y +L + N +KP P +
Subjt: NVKSMLSGNFDIKDLREANVILGIKIIRIENGISLDQFHYIEKILKKYNYFESKPACAPFGS
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