CuGenDBv2

Gene ID	Cmc01g0023801
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:23864042..23866719
RNA-Seq Expression	Cmc01g0023801
Synteny	Cmc01g0023801
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.9

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDK FIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQA  FS+SSDGGL+FER LCVPSDS +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYM EIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGM PFEALY KCCRSPVC GEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FV PFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

KAA0040188.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.49

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVF+EFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLKSHEQNYPTHDLELAA++FALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITR APLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDS  K 
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTY ASKWAQLYM EIVRLHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGMAPFEALY+KCCRS VC GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FVG FEILERIGPVAYR+ALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.84

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSV KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYM EIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEF YNNSYQATIGMAPFEALY KCCRSPVC GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP F+GPFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.13

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGY+QLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SSDGGL FE RLCVPSDS  KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYM EIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSPVC GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FVGPFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.49

Show/hide

Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDS  KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYM EIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGMAPFEALY+KCCRSP+C GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FVGPFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

90.9

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDK FIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQA  FS+SSDGGL+FER LCVPSDS +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYM EIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGM PFEALY KCCRSPVC GEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FV PFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

A0A5A7TB42 Reverse transcriptase

0.0e+00

91.49

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVF+EFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLKSHEQNYPTHDLELAA++FALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITR APLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDS  K 
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTY ASKWAQLYM EIVRLHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGMAPFEALY+KCCRS VC GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FVG FEILERIGPVAYR+ALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

A0A5A7U330 Reverse transcriptase

0.0e+00

91.84

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSV KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYM EIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEF YNNSYQATIGMAPFEALY KCCRSPVC GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP F+GPFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

A0A5A7UAA8 Reverse transcriptase

0.0e+00

91.13

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSGY+QLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SSDGGL FE RLCVPSDS  KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYM EIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSPVC GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FVGPFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

A0A5A7UP94 Pol protein

0.0e+00

91.49

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDK FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLF+QLQGATVFSKIDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
        TAFRSRYGHYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDS  KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYM EIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEF GSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFLGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
        LMEFAYNNSYQATIGMAPFEALY+KCCRSP+C GEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR
        ERRGKLSP FVGPFEILERIGPVAYRLALP SLSTVHDVFH+SMLR
Subjt:  ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLR

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.0e-119

30.62

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
         AFR   G +E+++M +G++ APA F   +N +  E  ++ V+                                             V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL

Query:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT
         +P+D+     ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Subjt:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT

Query:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
         ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF
           +W  H+ L++ +YNN+  +   M PFE ++      SP+ L    ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V 
Subjt:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF

Query:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML
        +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L
Subjt:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML

P0CT35 Transposon Tf2-2 polyprotein

1.0e-119

30.62

Show/hide

Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
         AFR   G +E+++M +G++ APA F   +N +  E  ++ V+                                             V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL

Query:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT
         +P+D+     ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Subjt:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT

Query:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
         ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF
           +W  H+ L++ +YNN+  +   M PFE ++      SP+ L    ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V 
Subjt:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF

Query:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML
        +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L
Subjt:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML

P0CT36 Transposon Tf2-3 polyprotein

1.0e-119

30.62

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
         AFR   G +E+++M +G++ APA F   +N +  E  ++ V+                                             V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL

Query:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT
         +P+D+     ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Subjt:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT

Query:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
         ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF
           +W  H+ L++ +YNN+  +   M PFE ++      SP+ L    ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V 
Subjt:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF

Query:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML
        +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L
Subjt:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML

P0CT37 Transposon Tf2-4 polyprotein

1.0e-119

30.62

Show/hide

Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
         AFR   G +E+++M +G++ APA F   +N +  E  ++ V+                                             V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL

Query:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT
         +P+D+     ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Subjt:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT

Query:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
         ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF
           +W  H+ L++ +YNN+  +   M PFE ++      SP+ L    ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V 
Subjt:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF

Query:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML
        +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L
Subjt:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML

P0CT41 Transposon Tf2-12 polyprotein

1.0e-119

30.62

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Query:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG
         AFR   G +E+++M +G++ APA F   +N +  E  ++ V+                                             V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +    E   +  DG L+  + ++
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RL

Query:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT
         +P+D+     ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+ 
Subjt:  CVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT

Query:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
         ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  VIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF
           +W  H+ L++ +YNN+  +   M PFE ++      SP+ L    ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V 
Subjt:  FLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYE-KCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVF

Query:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML
        +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L
Subjt:  LKVAPMRGVVRF-ERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTV-HDVFHISML

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.7e-21

46.15

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Query:  VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS
        +++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PVL +PD  
Subjt:  VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFV
          FV
Subjt:  GSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGCGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTT
GTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACAGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTC
AACCAATTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCC
AGATATGGGCACTACGAGTTTATTTTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACT
TTTGTGATCGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCCGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGGCCTTCCACAGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCT
CCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTG
ATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTAC
CCTACACATGATTTAGAGTTGGCAGCGATGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTG
AAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAAT
GTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCG
GTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTAGTCGAGAAACGT
GGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGTGAGTAAGACA
GAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGG
GAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAG
TGGGAAAACGTATCCATGGATTTCATTACAGGACTACCGAGAACTTTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAATCAGCGCACTTC
GTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTTGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGAT
GCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGAACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGT
CTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCTAGGTAGCTGGGACTCCCATTTGCATTTGATGGAATTTGCTTATAATAACAGTTAT
CAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGAAAAATGTTGTAGATCCCCGGTTTGCTTGGGTGAAGTGGGTGAGCAAAGATTGATGGGTCCTGAG
TTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAG
TTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGGGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAGTCCCTGTTTTGTTGGGCCGTTTGAG
ATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCAACATCACTCTCGACAGTTCATGATGTGTTCCATATCTCCATGTTGAGGAATTAA

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKRFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS
RYGHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA
PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTDHKSL
KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKR
GLAEAGQAEGFSISSDGGLVFERRLCVPSDSVSKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMLEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
LNQVLEDMLRACALEFLGSWDSHLHLMEFAYNNSYQATIGMAPFEALYEKCCRSPVCLGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLE
FEVGDKVFLKVAPMRGVVRFERRGKLSPCFVGPFEILERIGPVAYRLALPTSLSTVHDVFHISMLRN

Cmc01g0023801 (gene) of Melon (Charmono) v1.1 genome