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Cmc01g0023871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0023871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPHD domain-containing protein
Genome locationCMiso1.1chr01:24037549..24037953
RNA-Seq ExpressionCmc01g0023871
SyntenyCmc01g0023871
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043959.1 increased DNA methylation 1-like isoform X2 [Cucumis melo var. makuwa]7.2e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

KAE8651056.1 hypothetical protein Csa_002370 [Cucumis sativus]7.2e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

XP_008457981.1 PREDICTED: uncharacterized protein LOC103497541 [Cucumis melo]1.9e-44100Show/hide
Query:  MSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        MSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
Subjt:  MSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

XP_016899721.1 PREDICTED: uncharacterized protein LOC103486532 [Cucumis melo]7.2e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

XP_031738686.1 uncharacterized protein LOC101203549 isoform X1 [Cucumis sativus]7.2e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

TrEMBL top hitse value%identityAlignment
A0A0A0LB69 PHD-type domain-containing protein3.5e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

A0A1S3C7D9 uncharacterized protein LOC1034975419.1e-45100Show/hide
Query:  MSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        MSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
Subjt:  MSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

A0A1S4DUR3 uncharacterized protein LOC1034865323.5e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

A0A5A7TRX0 Increased DNA methylation 1-like isoform X23.5e-2090.91Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIV+NIET LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

A0A6A6KM28 Pectinesterase5.0e-1989.09Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR
        F +NMF+REKFVEHNVNAVAAGRV GVDPIEQITKRCIRIVKNIE  LSGCVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLCR

SwissProt top hitse value%identityAlignment
Q9FGK4 Cytochrome b561 and DOMON domain-containing protein At5g475303.5e-0942.65Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGIL
        Q FA+ LRP  +HKYR+YWNI HH++GY VII++++N + +G+  L      +N   Y   ++V+GI+
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGIL

Q9FKH6 Cytochrome b561 and DOMON domain-containing protein At5g357351.7e-0861.36Show/hide
Query:  LFPFLK-QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN
        LF F   Q FALL+RP  DHKYR YWN+ HH++GY  II+SI+N
Subjt:  LFPFLK-QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN

Q9LSE7 Cytochrome b561 and DOMON domain-containing protein At3g252901.0e-0864.86Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN
        Q FA+LLRP KDHKYR YWNI HH +GY ++ + IIN
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN

Q9LYS9 Cytochrome b561 and DOMON domain-containing protein At3g590705.0e-0836.04Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHV------FLMVIGILNFAKN----MFEREKFVEHNVNAVAA
        Q  +L  RPNKDHKYR YWN  HH++GY VI++SI N + +G+S LQ   S+  + +  +      F +V+ IL F K      F++ K VE +   V+ 
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHV------FLMVIGILNFAKN----MFEREKFVEHNVNAVAA

Query:  GRVHGVDPIEQ
          +   +  E+
Subjt:  GRVHGVDPIEQ

Q9SV71 Cytochrome b561 and DOMON domain-containing protein At4g129806.5e-0862.16Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN
        Q FA+LLRP KDHK+R  WNI HH +GY ++I+ IIN
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN

Arabidopsis top hitse value%identityAlignment
AT2G27980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain5.3e-1364.29Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHL-SGCVLCR
        +  NM EREKFV+ N+NA+AAGRV GVD I +IT RCIRIV +  T L S CVLCR
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHL-SGCVLCR

AT2G36720.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain5.0e-1150Show/hide
Query:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLC
        + +N F  E   E+NVN+ A G++ GVDP++Q+  RCIR+VKN+E   +GCVLC
Subjt:  FAKNMFEREKFVEHNVNAVAAGRVHGVDPIEQITKRCIRIVKNIETHLSGCVLC

AT3G25290.1 Auxin-responsive family protein7.2e-1064.86Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN
        Q FA+LLRP KDHKYR YWNI HH +GY ++ + IIN
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN

AT3G25290.2 Auxin-responsive family protein7.2e-1064.86Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN
        Q FA+LLRP KDHKYR YWNI HH +GY ++ + IIN
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIIN

AT5G47530.1 Auxin-responsive family protein2.5e-1042.65Show/hide
Query:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGIL
        Q FA+ LRP  +HKYR+YWNI HH++GY VII++++N + +G+  L      +N   Y   ++V+GI+
Subjt:  QDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGGATTTGTTTCCTTTTTTAAAACAGGATTTTGCTTTGCTTTTGAGGCCAAACAAGGATCATAAGTACAGAATTTATTGGAATATTGACCATCATTCC
ATAGGATATGGTGTGATAATTATGAGTATCATCAATAGGCTTGAACAAGGAGTTTCTGATTTGCAGTTCCATTCGTCTGTGCAGAATGTGCATCATTATCATGTA
TTCCTCATGGTGATTGGTATTTTAAATTTTGCCAAAAATATGTTCGAGAGAGAAAAGTTTGTTGAGCATAATGTCAATGCTGTTGCAGCGGGAAGGGTGCATGGA
GTTGACCCTATTGAGCAGATAACTAAAAGATGCATTCGAATTGTTAAGAACATAGAAACACATCTTAGTGGATGTGTGCTATGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGGATTTGTTTCCTTTTTTAAAACAGGATTTTGCTTTGCTTTTGAGGCCAAACAAGGATCATAAGTACAGAATTTATTGGAATATTGACCATCATTCC
ATAGGATATGGTGTGATAATTATGAGTATCATCAATAGGCTTGAACAAGGAGTTTCTGATTTGCAGTTCCATTCGTCTGTGCAGAATGTGCATCATTATCATGTA
TTCCTCATGGTGATTGGTATTTTAAATTTTGCCAAAAATATGTTCGAGAGAGAAAAGTTTGTTGAGCATAATGTCAATGCTGTTGCAGCGGGAAGGGTGCATGGA
GTTGACCCTATTGAGCAGATAACTAAAAGATGCATTCGAATTGTTAAGAACATAGAAACACATCTTAGTGGATGTGTGCTATGTCGGTAA
Protein sequenceShow/hide protein sequence
MVLDLFPFLKQDFALLLRPNKDHKYRIYWNIDHHSIGYGVIIMSIINRLEQGVSDLQFHSSVQNVHHYHVFLMVIGILNFAKNMFEREKFVEHNVNAVAAGRVHG
VDPIEQITKRCIRIVKNIETHLSGCVLCR