| GenBank top hits | e value | %identity | Alignment |
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| KAA0025802.1 pol protein [Cucumis melo var. makuwa] | 3.3e-47 | 70.12 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLRIRDSDI KTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FVIV +
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
Query: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
+ S +R+ +R RL+ S +L KKVSFLGHVVSSEGV VDPAKIE
Subjt: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
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| KAA0026249.1 pol protein [Cucumis melo var. makuwa] | 1.6e-65 | 79.1 | Show/hide |
Query: MDRCAFVLITELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDT
MDRCAFVLITELNKVT KNRYPLPRIDDLFDLLQGATIFSKIDL LGYHQLRIRDSDISKTAFRSRYGHYEFIVM FGLT+ALA
Subjt: MDRCAFVLITELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDT
Query: FVIVLSMISWFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHL
RLSMR FCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDP KIELLLVGLDHL
Subjt: FVIVLSMISWFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHL
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| KAA0045284.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-47 | 62.84 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLR+RDSDI KTAFRSRYG+YEFIVMSFGLTNA AVFMDLMN VFKDFLD+F+IV + I
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
Query: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHLQSAKFIVFWV
++ + L +R +L+ S +L KKV+FLGHVVSSEGV VDPAKIE + L+ A+F+V WV
Subjt: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHLQSAKFIVFWV
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| KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa] | 9.6e-47 | 68.9 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLRIRDSDI KTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLD+FVIV + I
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
Query: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
++ + L +R +L+ S +L KKV+FLGHVVSS+GV VDPAKIE
Subjt: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
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| TYK09653.1 pol protein [Cucumis melo var. makuwa] | 3.3e-47 | 70.12 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLRIRDSDI KTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FVIV +
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
Query: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
+ S +R+ +R RL+ S +L KKVSFLGHVVSSEGV VDPAKIE
Subjt: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SKZ1 Pol protein | 1.6e-47 | 70.12 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLRIRDSDI KTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FVIV +
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
Query: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
+ S +R+ +R RL+ S +L KKVSFLGHVVSSEGV VDPAKIE
Subjt: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
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| A0A5A7TQ85 Reverse transcriptase | 1.6e-47 | 62.84 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLR+RDSDI KTAFRSRYG+YEFIVMSFGLTNA AVFMDLMN VFKDFLD+F+IV + I
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
Query: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHLQSAKFIVFWV
++ + L +R +L+ S +L KKV+FLGHVVSSEGV VDPAKIE + L+ A+F+V WV
Subjt: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHLQSAKFIVFWV
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| A0A5A7VK60 Reverse transcriptase | 4.6e-47 | 68.9 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLRIRDSDI KTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLD+FVIV + I
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
Query: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
++ + L +R +L+ S +L KKV+FLGHVVSS+GV VDPAKIE
Subjt: WFTP-----RQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
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| A0A5D3CCS5 Pol protein | 1.6e-47 | 70.12 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
ELNKVT KNRYPLPRIDDLFD LQGAT+FSKIDL GYHQLRIRDSDI KTAFRSRYGHYEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FVIV +
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV----LS
Query: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
+ S +R+ +R RL+ S +L KKVSFLGHVVSSEGV VDPAKIE
Subjt: MISWFTPRQRLSMRRF--CIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIE
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| A0A5D3E3Q8 Pol protein | 7.6e-66 | 79.1 | Show/hide |
Query: MDRCAFVLITELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDT
MDRCAFVLITELNKVT KNRYPLPRIDDLFDLLQGATIFSKIDL LGYHQLRIRDSDISKTAFRSRYGHYEFIVM FGLT+ALA
Subjt: MDRCAFVLITELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDT
Query: FVIVLSMISWFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHL
RLSMR FCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDP KIELLLVGLDHL
Subjt: FVIVLSMISWFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLLVGLDHL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.2e-17 | 32.3 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
+LN++T +R+P+P +D++ L F+ IDL G+HQ+ + +SKTAF +++GHYE++ M FGL NA A F MN + + L+ +V L I
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
Query: WFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELL
F+ ++ + F +L + L ++ +FLGHV++ +G+ +P KIE +
Subjt: WFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.1e-18 | 32.72 | Show/hide |
Query: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
+LN++T +RYP+P +D++ L F+ IDL G+HQ+ + + ISKTAF ++ GHYE++ M FGL NA A F MN + + L+ +V L I
Subjt: ELNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV-LSMIS
Query: WFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLL
F+ + + F +L + L K+ +FLGH+V+ +G+ +P K++ ++
Subjt: WFTPRQRLSMRRFCIRFWRLFELISYTLSFLRRVLAKKVSFLGHVVSSEGVLVDPAKIELLL
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| P31843 RNA-directed DNA polymerase homolog | 2.6e-23 | 59.14 | Show/hide |
Query: LNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV
L KVT KN+YP+PR+DDLFD L AT F+K+DL GY Q+RI D KT +RYG +EF VM FGLTNALA F +LMN V ++LD FV+V
Subjt: LNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDTFVIV
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.7e-14 | 47.06 | Show/hide |
Query: LNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKD
LNK T + +PLPRID+L + A IF+ +DLH GYHQ+ + D KTAF + G YE+ VM FGL NA + F M F+D
Subjt: LNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKD
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.7e-14 | 47.06 | Show/hide |
Query: LNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKD
LNK T + +PLPRID+L + A IF+ +DLH GYHQ+ + D KTAF + G YE+ VM FGL NA + F M F+D
Subjt: LNKVTDKNRYPLPRIDDLFDLLQGATIFSKIDLHLGYHQLRIRDSDISKTAFRSRYGHYEFIVMSFGLTNALAVFMDLMNRVFKD
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