CuGenDBv2

Gene ID	Cmc01g0024251
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:24643429..24645547
RNA-Seq Expression	Cmc01g0024251
Synteny	Cmc01g0024251
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

87.65

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEA QAVEFS+SSDGGLLFER LCVPSDSA K 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF S+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYTASKWAQ+YMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.09

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA QAVEFS+SSDGGLLFERRLCVPSDS VK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF SRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYTASKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

87.5

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA QAVEFS+SSDGGLLFERRLCVPSDSAVK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELL++AHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYT SKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGT LDFSTAFHPQTDGQTERLN+VL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

KAA0062112.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

87.79

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHE HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK G
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSD SKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA QAVEFS+SSDGGLLFERRLCVPSDSAVK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF SRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYT+SKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQT+MGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.09

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA Q  EFS+SSDGGLLFERRLCVPSDSAVK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYTASKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

87.65

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEA QAVEFS+SSDGGLLFER LCVPSDSA K 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF S+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYTASKWAQ+YMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

A0A5A7U330 Reverse transcriptase

0.0e+00

88.09

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA QAVEFS+SSDGGLLFERRLCVPSDS VK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF SRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYTASKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

A0A5A7UP94 Pol protein

0.0e+00

87.5

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA QAVEFS+SSDGGLLFERRLCVPSDSAVK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELL++AHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYT SKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGT LDFSTAFHPQTDGQTERLN+VL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

A0A5A7V1N3 Reverse transcriptase

0.0e+00

87.79

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHE HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK G
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD SGSFVIYSD SKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA QAVEFS+SSDGGLLFERRLCVPSDSAVK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF SRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYT+SKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQT+MGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

A0A5D3BPI1 Reverse transcriptase

0.0e+00

88.09

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI LRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRS                             REFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRS-----------------------------REFLDTFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD SGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA                               +KELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA-------------------------------KKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
        LSRKVSHSAALITRQAPLHR+LERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEA Q  EFS+SSDGGLLFERRLCVPSDSAVK 
Subjt:  LSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK

Query:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT
        ELLS+AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLT
Subjt:  ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
        KSAHFVPGKSTYTASKWAQ+YMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGT LDFSTAFHPQTDGQTERLNQVL
Subjt:  KSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

5.5e-97

30.82

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+ L+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR                      + F++T L        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A                                    +  N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ ++ E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF
        + +P+D+ + + ++ K H     +HPG   +   + R + W+ +++++ E+   C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Subjt:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
          ++VVVDR +K A  VP   + TA + A+M+   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

P0CT35 Transposon Tf2-2 polyprotein

5.5e-97

30.82

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+ L+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR                      + F++T L        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A                                    +  N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ ++ E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF
        + +P+D+ + + ++ K H     +HPG   +   + R + W+ +++++ E+   C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Subjt:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
          ++VVVDR +K A  VP   + TA + A+M+   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

P0CT36 Transposon Tf2-3 polyprotein

5.5e-97

30.82

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+ L+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR                      + F++T L        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A                                    +  N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ ++ E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF
        + +P+D+ + + ++ K H     +HPG   +   + R + W+ +++++ E+   C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Subjt:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
          ++VVVDR +K A  VP   + TA + A+M+   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

P0CT37 Transposon Tf2-4 polyprotein

5.5e-97

30.82

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+ L+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR                      + F++T L        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A                                    +  N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ ++ E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF
        + +P+D+ + + ++ K H     +HPG   +   + R + W+ +++++ E+   C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Subjt:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
          ++VVVDR +K A  VP   + TA + A+M+   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

P0CT41 Transposon Tf2-12 polyprotein

5.5e-97

30.82

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+ L+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPK

Query:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR                      + F++T L        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRS---------------------REFLDTFL--------IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A                                    +  N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAA-----------------------------------KKELNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ ++ E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF
        + +P+D+ + + ++ K H     +HPG   +   + R + W+ +++++ E+   C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Subjt:  LCVPSDSAVKKELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL
          ++VVVDR +K A  VP   + TA + A+M+   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVL

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.1e-27

45.04

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Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDASGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDASGSFV

Sequences

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CDS sequence

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ATGGCCCCGGCAGAGCTGAAAGAACTTAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTCATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGGAGTTCCTAGAT
ACTTTTTTGATCGTGTTTATTGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTA
TGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCG
GTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAG
TTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGCTTC
GGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGC
AGAACTACCCTACACATGATTTAGAGTTGGCAGCAAAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCAT
CCAGGCAAGGCAAATGTTGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACTCGACAGGCCCCATTGCATCGAGAGCTTGAGCGGGCTGAGAT
TGCAGTGTCCGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGACAAAGGATCATTGATGCTCAGTGTAACGATCCTTATTTGGTTGAGA
AACGTGGCCTAGCAGAGGCAGCGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGAAA
GAATTATTATCTAAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGT
AGCAGAATTTTTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACG
TGTCCATGGATTTCATTACAGGACTGTCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCC
ACCTATACTGCTAGTAAGTGGGCACAGATGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATT
CTGGAAGGGTTTGCAGACTGCTATGGGCACGGGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGGGATATGTT
GCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGA

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIHLRSGYHQLRIKDGDVPKTAFRSREFLD
TFLIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQ
LTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDASGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAKKELNMRQRRWLELVKDYDCEILYH
PGKANVVADALSRKVSHSAALITRQAPLHRELERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQCNDPYLVEKRGLAEAAQAVEFSISSDGGLLFERRLCVPSDSAVKK
ELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLRGFTVIWVVVDRLTKSAHFVPGKS
TYTASKWAQMYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTGLDFSTAFHPQTDGQTERLNQVLGICCERVHWNFQVAGTPTCI

Cmc01g0024251 (gene) of Melon (Charmono) v1.1 genome