CuGenDBv2

Gene ID	Cmc01g0024281
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr01:24677513..24680155
RNA-Seq Expression	Cmc01g0024281
Synteny	Cmc01g0024281
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.92

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQ+LLDKGFIR SVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSGYHQLRIKDG   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQ NDPYLVEKR LAEAGQAVEFS+SSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0037901.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.56

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKN+YPLPRID LFDQLQGATVFSKIDLRSGYHQLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSA LITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCV SDSAVKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFA NNSYQATIGM PFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.39

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSGYHQLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEF YNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.8

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRP+VSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSGY+QLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.15

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSG HQLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFAYNNSYQATIGM PFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

92.92

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQ+LLDKGFIR SVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSGYHQLRIKDG   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQ NDPYLVEKR LAEAGQAVEFS+SSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7T8G8 Reverse transcriptase

0.0e+00

92.56

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKN+YPLPRID LFDQLQGATVFSKIDLRSGYHQLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSA LITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCV SDSAVKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFA NNSYQATIGM PFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

93.39

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Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSGYHQLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEF YNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

92.8

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRP+VSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSGY+QLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UP94 Pol protein

0.0e+00

93.15

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKK GSMRLCIDYRELNKVTVKNRYPLPRID LFDQLQGATVFSKIDLRSG HQLRIKD    K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F          V   G T+              EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  QRF----------VPDMGTTS------------LLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ+AQLTVQPTLR+RIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDS LH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLH

Query:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
         MEFAYNNSYQATIGM PFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF
Subjt:  FMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.2e-129

32.71

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        + P +++ +  ++ + L  G IR S +    PV+FV KK G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ G   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F    G                       T L E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +ILTDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR V  +         + +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W   +  ++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
         +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

3.2e-129

32.71

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        + P +++ +  ++ + L  G IR S +    PV+FV KK G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ G   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F    G                       T L E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +ILTDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR V  +         + +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W   +  ++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
         +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

3.2e-129

32.71

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        + P +++ +  ++ + L  G IR S +    PV+FV KK G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ G   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F    G                       T L E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +ILTDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR V  +         + +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W   +  ++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
         +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

3.2e-129

32.71

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        + P +++ +  ++ + L  G IR S +    PV+FV KK G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ G   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F    G                       T L E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +ILTDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR V  +         + +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W   +  ++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
         +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

3.2e-129

32.71

Show/hide

Query:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK
        + P +++ +  ++ + L  G IR S +    PV+FV KK G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ G   K
Subjt:  MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRK

Query:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
          F    G                       T L E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  QRFVPDMG----------------------TTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +ILTDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQILTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR V  +         + +D E   I          + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLTVQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W   +  ++ +YNN+  +   MTPFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
         +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  FLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.7e-27

45.04

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Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSDSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSDSFV

Sequences

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CDS sequence

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ATGGCCCCCGCAGAGCTGAAAGAACTGAAGTTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTT
GTTAAGAAGAAGGGTGGATCGATGCGTCTATGCATCGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGTTCTATTT
GACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGATGTACCGAAAACAGCGTTTCGTTCCA
GATATGGGCACTACGAGTTTATTGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCAT
TTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCT
AAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTGGCAGGTTAT
TATCGACGGTTTGTGGAGAATTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTC
CAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGACAGTTTTGTGATCTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGT
GTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTT
GCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCCTTACGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGA
CAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACAT
TCAGCAGCACTTATTACCCGACAGGCCCTATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCGGTGGGGGCAGTCACTATGCAGATAGCCCAGTTGACG
GTACAGCCGACTTTGAGGGAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCCGAGGCTGGACAAGCGGTTGAGTTCTCC
ATATCCTCTGATGGGGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGACAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCATAGTTCCCCATTTTCC
ATGCACCCGGGTAGTACGAAGATGTATCAGGATCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGT
CAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTG
CCGAGGACTCTGAGGGGTTTTACAGTGATTTGGGTTGTAGTGGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGG
GCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAG
ACGGCTATGGGAACGAGGTTAGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGT
GCATTGGAATTTCCAGGTAGCTGGGACTCCGACTTACATTTTATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGACACCATTTGAGGCCTTG
TACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAAGTGGGTGAGCAAAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATT
AGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCA
CCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTG
GCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTCTCCATGTTGAGGAAGTGA

mRNA sequence

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Protein sequence

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MAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKGGSMRLCIDYRELNKVTVKNRYPLPRIDVLFDQLQGATVFSKIDLRSGYHQLRIKDGMYRKQRFVP
DMGTTSLLEFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGY
YRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF
ALKIWRHYLYGEKIQILTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQALLHRDLERAEIAVSVGAVTMQIAQLT
VQPTLRERIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ
TAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSDLHFMEFAYNNSYQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKI
RSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

Cmc01g0024281 (gene) of Melon (Charmono) v1.1 genome