; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0024331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0024331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr01:24806986..24808452
RNA-Seq ExpressionCmc01g0024331
SyntenyCmc01g0024331
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-22076.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

KAA0037582.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-22076.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-22076.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

KAA0062270.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-22076.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-22076.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase8.3e-22176.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

A0A5A7T3K4 Reverse transcriptase8.3e-22176.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

A0A5A7U2V7 Reverse transcriptase8.3e-22176.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

A0A5A7UUL6 Reverse transcriptase8.3e-22176.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

A0A5D3BHI1 Reverse transcriptase8.3e-22176.56Show/hide
Query:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD
        Q  K + ED+PVV++F DVF DDL GLPP+REIEF+I+L+PGT PISQ PYRMAP ELKELK QLQELVDKGYI+PSVSPWGAP LFVKKKDGTLRLC+D
Subjt:  QGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVD

Query:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD
        YRQLNKVTIRNKYPLPRI+DLFDQL+GA++F K+DL SGYHQL ++E D+ K AFRTRYGHYEF VMPFGLTNA AVFMDLMNRIFH +LDQ VIVFIDD
Subjt:  YRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDD

Query:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT
        IL+YS   + H EHLRIVLQTL + +LYAK+SKC+FWL++V+FLGHVVSA+G+ VD QK+EA+VNWE+P + TEVRSFLGL GYYRRF+E+FS+LA+PLT
Subjt:  ILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLT

Query:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG
         LT+K+ KFEW++KCEQSFQELKKRLV++PIL LP  G  + IYCDAS  GLGCVLMQ+G V+AYASRQLK HE NYPTHDLELAAV+LALKIWRHYLFG
Subjt:  NLTKKDSKFEWTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFG

Query:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV
        EKCHI T+HKSLKYIFDQKELNLRQRRWLELI+DYDCTIEYHPGKANVVADALSRKSR  K++L  I   LL +L+ + AVV
Subjt:  EKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVV

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.8e-8538.71Show/hide
Query:  KELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGT-----LRLCVDYRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKI
        +E+++Q+Q+++++G I+ S SP+ +P   V KK         R+ +DYR+LN++T+ +++P+P ++++  +L   + F  +DL  G+HQ+ +    V K 
Subjt:  KELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGT-----LRLCVDYRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKI

Query:  AFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGI
        AF T++GHYE+L MPFGL NA A F   MN I  P L++  +V++DDI+++S S D+H++ L +V + L    L  +  KC+F      FLGHV++ +GI
Subjt:  AFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGI

Query:  YVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFEWTN-KCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGL
          + +KIEAI  +  P+   E+++FLGLTGYYR+F+  F+ +A P+T   KK+ K + TN + + +F++LK  +   PIL +P     F +  DAS   L
Subjt:  YVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFEWTN-KCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGL

Query:  GCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADA
        G VL Q+G  ++Y SR L  HE NY T + EL A++ A K +RHYL G    I+++H+ L +++  K+ N +  RW   + ++D  I+Y  GK N VADA
Subjt:  GCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADA

Query:  LSR
        LSR
Subjt:  LSR

P20825 Retrovirus-related Pol polyprotein from transposon 2971.1e-8438.66Show/hide
Query:  TPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKD-----GTLRLCVDYRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHS
        +PI    Y +A     E++ Q+QE++++G I+ S SP+ +P   V KK         R+ +DYR+LN++TI ++YP+P ++++  +L     F  +DL  
Subjt:  TPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKD-----GTLRLCVDYRQLNKVTIRNKYPLPRINDLFDQLKGASVFLKVDLHS

Query:  GYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWL
        G+HQ+ + E  + K AF T+ GHYE+L MPFGL NA A F   MN I  P L++  +V++DDI+I+S S  +H+  +++V   L D  L  +  KC+F  
Subjt:  GYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDKHVEHLRIVLQTLHDWKLYAKYSKCDFWL

Query:  DRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFEWTNKCE--QSFQELKKRLVSSPILTLPT
            FLGH+V+ +GI  +  K++AIV++  P+   E+R+FLGLTGYYR+F+  ++ +A P+T+  KK +K + T K E  ++F++LK  ++  PIL LP 
Subjt:  DRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFEWTNKCE--QSFQELKKRLVSSPILTLPT

Query:  PGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYD
            F +  DAS+  LG VL Q G  +++ SR L  HE NY   + EL A++ A K +RHYL G +  I ++H+ L+++ + KE   +  RW   + +Y 
Subjt:  PGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYD

Query:  CTIEYHPGKANVVADALSR
          I+Y  GK N VADALSR
Subjt:  CTIEYHPGKANVVADALSR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.5e-8138.36Show/hide
Query:  QDFSDVFSDDLHGLPP---NREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVDYRQLNKVTIR
        Q + ++  +DL   P    N  ++  I++ PG       PY +  K  +E+   +Q+L+D  +I PS SP  +P + V KKDGT RLCVDYR LNK TI 
Subjt:  QDFSDVFSDDLHGLPP---NREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVDYRQLNKVTIR

Query:  NKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDK
        + +PLPRI++L  ++  A +F  +DLHSGYHQ+ ++  D  K AF T  G YE+ VMPFGL NA + F   M   F     + V V++DDILI+S S ++
Subjt:  NKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDK

Query:  HVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFE
        H +HL  VL+ L +  L  K  KC F  +   FLG+ +  + I     K  AI ++  P TV + + FLG+  YYRRF+   SK+A P+        K +
Subjt:  HVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFE

Query:  WTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGK------VVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCH
        WT K +++ ++LK  L +SP+L        + +  DAS  G+G VL +         VV Y S+ L++ + NYP  +LEL  +I AL  +R+ L G+   
Subjt:  WTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGK------VVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCH

Query:  INTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSR
        + T+H SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR
Subjt:  INTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus4.7e-8037.66Show/hide
Query:  DFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKK-----DGTLRLCVDYRQLNKVTI
        +F  +F   L G+     ++  I       PI    Y        E++ Q+ EL+  G I+PS SP+ +P   V KK     +   R+ VD+++LN VTI
Subjt:  DFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKK-----DGTLRLCVDYRQLNKVTI

Query:  RNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSED
         + YP+P IN     L  A  F  +DL SG+HQ+++KE D+PK AF T  G YEFL +PFGL NA A+F  +++ I    + ++  V+IDDI+++S   D
Subjt:  RNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSED

Query:  KHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTK-----
         H ++LR+VL +L    L     K  F   +V FLG++V+A+GI  D +K+ AI     P++V E++ FLG+T YYR+F+++++K+A PLTNLT+     
Subjt:  KHVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTK-----

Query:  ----KDSKFEWT--NKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQE----GKVVAYASRQLKTHEYNYPTHDLELAAVILALKIW
            + SK   T      QSF +LK  L SS IL  P     F +  DAS+  +G VL Q+     + +AY SR L   E NY T + E+ A+I +L   
Subjt:  ----KDSKFEWT--NKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQE----GKVVAYASRQLKTHEYNYPTHDLELAAVILALKIW

Query:  RHYLFGE-KCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTIL
        R YL+G     + T+H+ L +    +  N + +RW   I +Y+C + Y PGK+NVVADALSR   Q    LN +ST L
Subjt:  RHYLFGE-KCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSRKSRQSKASLNAISTIL

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.5e-8138.36Show/hide
Query:  QDFSDVFSDDLHGLPP---NREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVDYRQLNKVTIR
        Q + ++  +DL   P    N  ++  I++ PG       PY +  K  +E+   +Q+L+D  +I PS SP  +P + V KKDGT RLCVDYR LNK TI 
Subjt:  QDFSDVFSDDLHGLPP---NREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVDYRQLNKVTIR

Query:  NKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDK
        + +PLPRI++L  ++  A +F  +DLHSGYHQ+ ++  D  K AF T  G YE+ VMPFGL NA + F   M   F     + V V++DDILI+S S ++
Subjt:  NKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDK

Query:  HVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFE
        H +HL  VL+ L +  L  K  KC F  +   FLG+ +  + I     K  AI ++  P TV + + FLG+  YYRRF+   SK+A P+        K +
Subjt:  HVEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFE

Query:  WTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGK------VVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCH
        WT K +++  +LK  L +SP+L        + +  DAS  G+G VL +         VV Y S+ L++ + NYP  +LEL  +I AL  +R+ L G+   
Subjt:  WTNKCEQSFQELKKRLVSSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGK------VVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCH

Query:  INTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSR
        + T+H SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR
Subjt:  INTNHKSLKYIFDQKELNLRQRRWLELIRDYDCTIEYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.6e-2543.65Show/hide
Query:  VEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLG--HVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKF
        + HL +VLQ     + YA   KC F   ++ +LG  H++S EG+  D  K+EA+V W +P   TE+R FLGLTGYYRRFV+ + K+  PLT L KK+S  
Subjt:  VEHLRIVLQTLHDWKLYAKYSKCDFWLDRVIFLG--HVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKF

Query:  EWTNKCEQSFQELKKRLVSSPILTLP
        +WT     +F+ LK  + + P+L LP
Subjt:  EWTNKCEQSFQELKKRLVSSPILTLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACACAAGGGAGTAAACCAAGATTGGAAGATATTCCAGTTGTGCAAGATTTTTCAGATGTGTTTTCGGATGATTTACATGGTTTACCTCCAAATAGAGAGATTGA
ATTTTCAATTGATCTAATTCCTGGAACAACACCAATATCACAACCTCCATACAGAATGGCACCTAAAGAGCTGAAAGAATTGAAGACGCAGTTACAAGAGTTGGTAGACA
AGGGTTATATCCAACCGAGTGTATCACCATGGGGTGCACCACCGCTGTTTGTGAAAAAGAAGGATGGCACCTTGAGATTGTGTGTTGATTACAGACAATTGAACAAGGTG
ACTATACGCAATAAATATCCATTGCCTCGAATAAATGATTTATTCGATCAGCTTAAAGGTGCCTCAGTATTTTTAAAAGTTGATCTACATTCAGGATATCATCAACTTAA
TATAAAGGAAGTAGATGTTCCAAAAATAGCATTCAGAACACGATATGGTCATTACGAATTCTTAGTGATGCCTTTTGGACTAACTAATGCACGAGCAGTATTTATGGATC
TCATGAACAGAATATTCCATCCATTCTTAGATCAGTTGGTAATTGTATTTATTGATGATATACTCATTTATTCGTGCAGCGAGGACAAACATGTTGAACATCTTAGAATC
GTGTTGCAAACATTGCATGATTGGAAGTTATATGCTAAATATAGTAAGTGTGACTTTTGGCTGGATCGAGTGATCTTTTTGGGTCATGTAGTTTCAGCTGAAGGTATATA
TGTTGATCTGCAAAAGATTGAAGCAATCGTCAATTGGGAACAACCAAGCACAGTCACAGAAGTCCGTAGTTTTCTTGGTCTAACGGGATATTATCGTCGTTTTGTGGAAG
AGTTTTCGAAATTGGCAATTCCGCTTACTAATTTGACAAAGAAGGACTCTAAATTTGAATGGACGAACAAATGTGAACAAAGTTTTCAGGAATTGAAGAAGAGGTTGGTG
TCATCTCCAATTTTAACACTTCCAACACCTGGTGTGGGATTTGAGATTTACTGTGATGCTTCCCACCAAGGTCTTGGTTGTGTTTTAATGCAAGAAGGGAAGGTGGTAGC
TTATGCATCGAGACAATTGAAGACGCATGAGTACAACTATCCAACGCATGACCTTGAGTTAGCAGCTGTAATTTTGGCATTGAAGATATGGAGACATTACTTGTTTGGTG
AAAAATGTCACATTAACACCAATCATAAGAGCTTGAAATATATTTTTGATCAGAAAGAGTTGAATTTGAGACAAAGAAGATGGTTGGAATTAATTAGAGATTACGATTGC
ACAATAGAGTATCATCCAGGAAAAGCAAATGTTGTAGCGGATGCATTGAGTAGGAAGTCTAGACAATCAAAGGCTTCACTTAATGCTATTAGTACAATTTTGCTAAGAGA
CCTGAAGATTACTAATGCGGTGGTTGCTGTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACACAAGGGAGTAAACCAAGATTGGAAGATATTCCAGTTGTGCAAGATTTTTCAGATGTGTTTTCGGATGATTTACATGGTTTACCTCCAAATAGAGAGATTGA
ATTTTCAATTGATCTAATTCCTGGAACAACACCAATATCACAACCTCCATACAGAATGGCACCTAAAGAGCTGAAAGAATTGAAGACGCAGTTACAAGAGTTGGTAGACA
AGGGTTATATCCAACCGAGTGTATCACCATGGGGTGCACCACCGCTGTTTGTGAAAAAGAAGGATGGCACCTTGAGATTGTGTGTTGATTACAGACAATTGAACAAGGTG
ACTATACGCAATAAATATCCATTGCCTCGAATAAATGATTTATTCGATCAGCTTAAAGGTGCCTCAGTATTTTTAAAAGTTGATCTACATTCAGGATATCATCAACTTAA
TATAAAGGAAGTAGATGTTCCAAAAATAGCATTCAGAACACGATATGGTCATTACGAATTCTTAGTGATGCCTTTTGGACTAACTAATGCACGAGCAGTATTTATGGATC
TCATGAACAGAATATTCCATCCATTCTTAGATCAGTTGGTAATTGTATTTATTGATGATATACTCATTTATTCGTGCAGCGAGGACAAACATGTTGAACATCTTAGAATC
GTGTTGCAAACATTGCATGATTGGAAGTTATATGCTAAATATAGTAAGTGTGACTTTTGGCTGGATCGAGTGATCTTTTTGGGTCATGTAGTTTCAGCTGAAGGTATATA
TGTTGATCTGCAAAAGATTGAAGCAATCGTCAATTGGGAACAACCAAGCACAGTCACAGAAGTCCGTAGTTTTCTTGGTCTAACGGGATATTATCGTCGTTTTGTGGAAG
AGTTTTCGAAATTGGCAATTCCGCTTACTAATTTGACAAAGAAGGACTCTAAATTTGAATGGACGAACAAATGTGAACAAAGTTTTCAGGAATTGAAGAAGAGGTTGGTG
TCATCTCCAATTTTAACACTTCCAACACCTGGTGTGGGATTTGAGATTTACTGTGATGCTTCCCACCAAGGTCTTGGTTGTGTTTTAATGCAAGAAGGGAAGGTGGTAGC
TTATGCATCGAGACAATTGAAGACGCATGAGTACAACTATCCAACGCATGACCTTGAGTTAGCAGCTGTAATTTTGGCATTGAAGATATGGAGACATTACTTGTTTGGTG
AAAAATGTCACATTAACACCAATCATAAGAGCTTGAAATATATTTTTGATCAGAAAGAGTTGAATTTGAGACAAAGAAGATGGTTGGAATTAATTAGAGATTACGATTGC
ACAATAGAGTATCATCCAGGAAAAGCAAATGTTGTAGCGGATGCATTGAGTAGGAAGTCTAGACAATCAAAGGCTTCACTTAATGCTATTAGTACAATTTTGCTAAGAGA
CCTGAAGATTACTAATGCGGTGGTTGCTGTAAATTAG
Protein sequenceShow/hide protein sequence
MDTQGSKPRLEDIPVVQDFSDVFSDDLHGLPPNREIEFSIDLIPGTTPISQPPYRMAPKELKELKTQLQELVDKGYIQPSVSPWGAPPLFVKKKDGTLRLCVDYRQLNKV
TIRNKYPLPRINDLFDQLKGASVFLKVDLHSGYHQLNIKEVDVPKIAFRTRYGHYEFLVMPFGLTNARAVFMDLMNRIFHPFLDQLVIVFIDDILIYSCSEDKHVEHLRI
VLQTLHDWKLYAKYSKCDFWLDRVIFLGHVVSAEGIYVDLQKIEAIVNWEQPSTVTEVRSFLGLTGYYRRFVEEFSKLAIPLTNLTKKDSKFEWTNKCEQSFQELKKRLV
SSPILTLPTPGVGFEIYCDASHQGLGCVLMQEGKVVAYASRQLKTHEYNYPTHDLELAAVILALKIWRHYLFGEKCHINTNHKSLKYIFDQKELNLRQRRWLELIRDYDC
TIEYHPGKANVVADALSRKSRQSKASLNAISTILLRDLKITNAVVAVN