| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046059.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.0e-80 | 88.44 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKVTVKNKYPLPRIDDLFDQLQGA VFSKI+LQSGYHQLRIKD D+ KT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSF+GHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| KAA0057631.1 pol protein [Cucumis melo var. makuwa] | 8.0e-80 | 87.86 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKV+VKN+YPLPRIDDLFDQLQGA VFSKIDL+SGYHQLRIKD D+LKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR F FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK+E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSFLGHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| KAA0067899.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.0e-80 | 88.95 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKVTVKN+YPLPRIDDLFDQLQGA VFSKIDL+SGYHQLRIKD D+ KT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
IVFIDDILIYSK E EHEEHLRMVL+TLR K Y+KFSKCEFWLKQVSFLGHVVSKA VSMDPAKIEAVTSW
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
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| TYK11938.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.0e-80 | 88.44 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKVTVKNKYPLPRIDDLFDQLQGA VFSKI+LQSGYHQLRIKD D+ KT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSF+GHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| TYK16001.1 pol protein [Cucumis melo var. makuwa] | 8.0e-80 | 87.86 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKV+VKN+YPLPRIDDLFDQLQGA VFSKIDL+SGYHQLRIKD D+LKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR F FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK+E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSFLGHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TXT7 Ty3-gypsy retrotransposon protein | 3.9e-80 | 88.44 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKVTVKNKYPLPRIDDLFDQLQGA VFSKI+LQSGYHQLRIKD D+ KT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSF+GHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| A0A5A7UVU1 Pol protein | 3.9e-80 | 87.86 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKV+VKN+YPLPRIDDLFDQLQGA VFSKIDL+SGYHQLRIKD D+LKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR F FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK+E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSFLGHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| A0A5A7VRW0 Ty3-gypsy retrotransposon protein | 3.9e-80 | 88.95 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKVTVKN+YPLPRIDDLFDQLQGA VFSKIDL+SGYHQLRIKD D+ KT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
IVFIDDILIYSK E EHEEHLRMVL+TLR K Y+KFSKCEFWLKQVSFLGHVVSKA VSMDPAKIEAVTSW
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
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| A0A5D3CLB5 Ty3-gypsy retrotransposon protein | 3.9e-80 | 88.44 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKVTVKNKYPLPRIDDLFDQLQGA VFSKI+LQSGYHQLRIKD D+ KT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSF+GHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| A0A5D3CVS0 Pol protein | 3.9e-80 | 87.86 | Show/hide |
Query: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
M LCI+YRELNKV+VKN+YPLPRIDDLFDQLQGA VFSKIDL+SGYHQLRIKD D+LKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR F FLDTFV
Subjt: MCLCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFV
Query: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
IVFIDDILIYSK+E EHEEHLRMVL+TLR KLY+KFSKCEFWLKQVSFLGHVVSKA VS+DPAKIEAVTSW+
Subjt: IVFIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSWS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.4e-31 | 37.06 | Show/hide |
Query: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
+ I+YR+LN++TV +++P+P +D++ +L F+ IDL G+HQ+ + + KT F +++GHYE++ M FGL NAPA F MN + L+ +V
Subjt: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
Query: FIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
++DDI+++S EH + L +V E L L + KCEF ++ +FLGHV++ + +P KIEA+ +
Subjt: FIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
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| P0CT34 Transposon Tf2-1 polyprotein | 1.7e-29 | 37.06 | Show/hide |
Query: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
+ ++Y+ LNK N YPLP I+ L ++QG+ +F+K+DL+S YH +R++ D K FR G +E++VM +G++ APA F +N + ++ V+
Subjt: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
Query: FIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
++DDILI+SK E EH +H++ VL+ L+ L +KCEF QV F+G+ +S+ + I+ V W
Subjt: FIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
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| P0CT41 Transposon Tf2-12 polyprotein | 1.7e-29 | 37.06 | Show/hide |
Query: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
+ ++Y+ LNK N YPLP I+ L ++QG+ +F+K+DL+S YH +R++ D K FR G +E++VM +G++ APA F +N + ++ V+
Subjt: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
Query: FIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
++DDILI+SK E EH +H++ VL+ L+ L +KCEF QV F+G+ +S+ + I+ V W
Subjt: FIDDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.8e-32 | 37.5 | Show/hide |
Query: INYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIVFI
I+YR+LN++T+ ++YP+P +D++ +L F+ IDL G+HQ+ + + I KT F ++ GHYE++ M FGL NAPA F MN + L+ +V++
Subjt: INYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIVFI
Query: DDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
DDI+I+S EH +++V L L + KCEF K+ +FLGH+V+ + +P K++A+ S+
Subjt: DDILIYSKIEPEHEEHLRMVLETLRAYKLYSKFSKCEFWLKQVSFLGHVVSKASVSMDPAKIEAVTSW
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| P31843 RNA-directed DNA polymerase homolog | 5.8e-33 | 53.38 | Show/hide |
Query: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
+CI+YR L KVT+KNKYP+PR+DDLFD+L A F+K+DL+SGY Q+RI D KT +RYG +EF VM FGLTNA A F +LMN V + +LD FV+V
Subjt: LCINYRELNKVTVKNKYPLPRIDDLFDQLQGAIVFSKIDLQSGYHQLRIKDSDILKTNFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFWGFLDTFVIV
Query: FIDDIL---IYSKIEPEHEEHLRMVLETLRAYK
++DD++ IYS EH +HLR+V E+ ++
Subjt: FIDDIL---IYSKIEPEHEEHLRMVLETLRAYK
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