| GenBank top hits | e value | %identity | Alignment |
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| KAA0053124.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 2.5e-83 | 74.52 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+SCKGYS+ GA+KTLF+H TN+ LIVAQIYVDDIIFGGFPQDL+NNFIDIMKSEFEMSMVGE SC LGLQIKQ+SE IFISQEKY KNIVKKF LE S+
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
HK TPAA KITKDTNG I D+KLY+SII +LLYLTANRPDIAY + +CAR+Q++ +TSHLEA+KR++KY++ SDFGILY Y TSILVGYC+ DW G
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
Query: SFNDMKST
S ++ KST
Subjt: SFNDMKST
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| KAA0053137.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.9e-79 | 70.53 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+ +GYS+G +K LFIHR +++L+VAQIYVDDIIFGGFP DL+NNFI+IM+SEFEMSMVGELSCFLGLQIKQK++GIFISQEKY +N+VKKF L+ +R
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
+K TPAAT VK+TKDT GA D+KLYRSI+ +LLYLTA+RPDIAYVV +CARYQA+ + + LE +KR+LKYV+ TSDFG++YSYD TS LVGYC+ADWAG
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
Query: SFNDMKS
S +D K+
Subjt: SFNDMKS
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| KAA0068014.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.0e-81 | 83.51 | Show/hide |
Query: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
TN++LIVAQIYVDDIIFGGFPQDLV+NFIDIMKSEFEMSMVGELSCFLGLQIKQKSE IFISQEKYVKNIVKKF LE SRHK TPA TQVKITKDTNGA
Subjt: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
Query: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
AD+KLYRSIIE+LL+LTA+RPDIAY V +C RYQ + Q SHLEA+KR+LKYV+ TSDFGILYSYD TSILVGYC+ADWAGS +D K+T
Subjt: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
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| TYK18114.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.0e-81 | 83.51 | Show/hide |
Query: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
TN++LIVAQIYVDDIIFGGFPQDLV+NFIDIMKSEFEMSMVGELSCFLGLQIKQKSE IFISQEKYVKNIVKKF LE SRHK TPA TQVKITKDTNGA
Subjt: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
Query: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
AD+KLYRSIIE+LL+LTA+RPDIAY V +C RYQ + Q SHLEA+KR+LKYV+ TSDFGILYSYD TSILVGYC+ADWAGS +D K+T
Subjt: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
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| TYK28190.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-83 | 80.51 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+SCKGYS+GGA+KTLFIHRTN++LIVAQIYVDD+IFGGF QDL++NFI+IM S+FEMSMVGELSCFLGLQIKQKSEGIFISQEKY KNI+KKF LE SR
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCN
HK TP TQVKI KDTNGA AD+KLYRSII +LLYLTA+RP+IAYVV +CARYQA+ + SHLEA+KR+LKYV+ TSDFGILYSYD TSILVGYC+
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UCZ0 Putative gag-pol polyprotein | 1.2e-83 | 74.52 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+SCKGYS+ GA+KTLF+H TN+ LIVAQIYVDDIIFGGFPQDL+NNFIDIMKSEFEMSMVGE SC LGLQIKQ+SE IFISQEKY KNIVKKF LE S+
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
HK TPAA KITKDTNG I D+KLY+SII +LLYLTANRPDIAY + +CAR+Q++ +TSHLEA+KR++KY++ SDFGILY Y TSILVGYC+ DW G
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
Query: SFNDMKST
S ++ KST
Subjt: SFNDMKST
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| A0A5A7VKR7 Putative gag-pol polyprotein | 5.1e-82 | 83.51 | Show/hide |
Query: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
TN++LIVAQIYVDDIIFGGFPQDLV+NFIDIMKSEFEMSMVGELSCFLGLQIKQKSE IFISQEKYVKNIVKKF LE SRHK TPA TQVKITKDTNGA
Subjt: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
Query: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
AD+KLYRSIIE+LL+LTA+RPDIAY V +C RYQ + Q SHLEA+KR+LKYV+ TSDFGILYSYD TSILVGYC+ADWAGS +D K+T
Subjt: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
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| A0A5D3BPB3 Gag-pol polyprotein | 2.4e-79 | 70.53 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+ +GYS+G +K LFIHR +++L+VAQIYVDDIIFGGFP DL+NNFI+IM+SEFEMSMVGELSCFLGLQIKQK++GIFISQEKY +N+VKKF L+ +R
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
+K TPAAT VK+TKDT GA D+KLYRSI+ +LLYLTA+RPDIAYVV +CARYQA+ + + LE +KR+LKYV+ TSDFG++YSYD TS LVGYC+ADWAG
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
Query: SFNDMKS
S +D K+
Subjt: SFNDMKS
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| A0A5D3D3G3 Putative gag-pol polyprotein | 5.1e-82 | 83.51 | Show/hide |
Query: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
TN++LIVAQIYVDDIIFGGFPQDLV+NFIDIMKSEFEMSMVGELSCFLGLQIKQKSE IFISQEKYVKNIVKKF LE SRHK TPA TQVKITKDTNGA
Subjt: TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAI
Query: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
AD+KLYRSIIE+LL+LTA+RPDIAY V +C RYQ + Q SHLEA+KR+LKYV+ TSDFGILYSYD TSILVGYC+ADWAGS +D K+T
Subjt: ADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
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| A0A5D3DY67 Putative gag-pol polyprotein | 5.4e-84 | 80.51 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+SCKGYS+GGA+KTLFIHRTN++LIVAQIYVDD+IFGGF QDL++NFI+IM S+FEMSMVGELSCFLGLQIKQKSEGIFISQEKY KNI+KKF LE SR
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCN
HK TP TQVKI KDTNGA AD+KLYRSII +LLYLTA+RP+IAYVV +CARYQA+ + SHLEA+KR+LKYV+ TSDFGILYSYD TSILVGYC+
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.3e-20 | 30.69 | Show/hide |
Query: NKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAIAD
N+ I +YVDD++ +NNF + +F M+ + E+ F+G++I+ + + I++SQ YVK I+ KF +E TP +++ + N
Subjt: NKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAIAD
Query: NKLYRSIIENLLY-LTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDAT--SILVGYCNADWAGSFNDMKST
N RS+I L+Y + RPD+ V + +RY + + + + +KRVL+Y+ T D +++ + + ++GY ++DWAGS D KST
Subjt: NKLYRSIIENLLY-LTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDAT--SILVGYCNADWAGSFNDMKST
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-19 | 27.27 | Show/hide |
Query: DNYISCKGYSKGGAEKTLFIHR-TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQI--KQKSEGIFISQEKYVKNIVKKFE
D+++ + Y K ++ ++ R + N I+ +YVDD++ G + L+ + F+M +G LG++I ++ S +++SQEKY++ ++++F
Subjt: DNYISCKGYSKGGAEKTLFIHR-TNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQI--KQKSEGIFISQEKYVKNIVKKFE
Query: LELSRHKMTPAATQVKITKDTNGAIADNK------LYRSIIENLLY-LTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATS
++ ++ TP A +K++K + K Y S + +L+Y + RPDIA+ V + +R+ N H EA+K +L+Y+ T+ + + +
Subjt: LELSRHKMTPAATQVKITKDTNGAIADNK------LYRSIIENLLY-LTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATS
Query: ILVGYCNADWAGSFNDMKST
IL GY +AD AG ++ KS+
Subjt: ILVGYCNADWAGSFNDMKST
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.0e-19 | 32.4 | Show/hide |
Query: IYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAIADNKLYRSI
+YVDDI+ G L+N I + S F M +G + FLG+QIK G+F+SQ KY + I+ + + TP ++ + T D +RSI
Subjt: IYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSRHKMTPAATQVKITKDTNGAIADNKLYRSI
Query: IENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
+ L YLT RPDI+Y V + + + + +KRVL+YV T G+ ++ + +C++DWAG + +ST
Subjt: IENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAGSFNDMKST
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.0e-26 | 30.14 | Show/hide |
Query: NYISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELS
NY+ G+ ++ +LF+ + ++ +YVDDI+ G L++N +D + F + EL FLG++ K+ G+ +SQ +Y+ +++ + + +
Subjt: NYISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELS
Query: RHKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWA
+ TP A K++ + + D YR I+ +L YL RPDI+Y V +++ HL+A+KR+L+Y+ T + GI T L Y +ADWA
Subjt: RHKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWA
Query: GSFNDMKST
G +D ST
Subjt: GSFNDMKST
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.5e-26 | 30.77 | Show/hide |
Query: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Y+ G+ ++ +LF+ + +I +YVDDI+ G L+ + +D + F + +L FLG++ K+ +G+ +SQ +Y +++ + + ++
Subjt: YISCKGYSKGGAEKTLFIHRTNNKLIVAQIYVDDIIFGGFPQDLVNNFIDIMKSEFEMSMVGELSCFLGLQIKQKSEGIFISQEKYVKNIVKKFELELSR
Query: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
TP AT K+T + + D YR I+ +L YL RPD++Y V ++Y H A+KRVL+Y+ T D GI T L Y +ADWAG
Subjt: HKMTPAATQVKITKDTNGAIADNKLYRSIIENLLYLTANRPDIAYVVRLCARYQANSQTSHLEAIKRVLKYVYETSDFGILYSYDATSILVGYCNADWAG
Query: SFNDMKST
+D ST
Subjt: SFNDMKST
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