| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.0e-50 | 83.33 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
+VSRYQSNPG DHWT VKNILKYLRRT++YMLVY KD+ILT YTDSD Q DKDARK TSGSVFTLNGGAVVWR VKQTCIADSTMEAEYV AA E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
VWLRKFL DLEVVPNMHLPITL CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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| KAA0026146.1 gag/pol protein [Cucumis melo var. makuwa] | 4.4e-54 | 98.15 | Show/hide |
Query: RRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLRKFLIDLEVVPNMHLPITLNCDNKC
RRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGG VVWRGVKQTCIADSTMEAEYVAAYETVWLRKFLIDLEVVPNMHLPITL CDNKC
Subjt: RRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLRKFLIDLEVVPNMHLPITLNCDNKC
Query: YSCKFTKT
YSCKFTKT
Subjt: YSCKFTKT
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| KAA0053196.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-49 | 80.95 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
MVSRYQSNPG DHWT VKNILKYLRRTKDYMLVY KD+ILT YTDS+ Q DKDARK TSGSVFTLNGGAVVWR +KQ+CIADSTMEAEYV AA E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
VWL+KFL DLE+VPNMHL ITL CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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| KAA0053327.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-49 | 79.37 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
+VSRYQ+NPGCDHWT VKNILKYLRRTKDYMLVY KD+ILT YTDSD Q DK+ARK+TS SVFTLN GAVVWR +K++CIADSTMEAEYV AA E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
VWL+KFL DLEVVPNMHLPITL CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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| TYK27801.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-50 | 81.15 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLR
M+SRYQSNPG DHWTTVKNILKYL+RTKDYML+Y KD+ILT YTDS+ Q DKDARK TSGSVFTLN GAVVWR +KQ+CIADSTME EYVAA E VWLR
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLR
Query: KFLIDLEVVPNMHLPITLNCDN
KFL DLE+VPNMHL ITL CDN
Subjt: KFLIDLEVVPNMHLPITLNCDN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UFP8 Gag/pol protein | 9.2e-50 | 79.37 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
+VSRYQ+NPGCDHWT VKNILKYLRRTKDYMLVY KD+ILT YTDSD Q DK+ARK+TS SVFTLN GAVVWR +K++CIADSTMEAEYV AA E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
VWL+KFL DLEVVPNMHLPITL CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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| A0A5D3BPF9 Gag/pol protein | 7.1e-50 | 80.95 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
MVSRYQSNPG DHWT VKNILKYLRRTKDYMLVY KD+ILT YTDS+ Q DKDARK TSGSVFTLNGGAVVWR +KQ+CIADSTMEAEYV AA E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
VWL+KFL DLE+VPNMHL ITL CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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| A0A5D3CMF7 Gag/pol protein | 2.1e-54 | 98.15 | Show/hide |
Query: RRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLRKFLIDLEVVPNMHLPITLNCDNKC
RRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGG VVWRGVKQTCIADSTMEAEYVAAYETVWLRKFLIDLEVVPNMHLPITL CDNKC
Subjt: RRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLRKFLIDLEVVPNMHLPITLNCDNKC
Query: YSCKFTKT
YSCKFTKT
Subjt: YSCKFTKT
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| A0A5D3DVT2 Gag/pol protein | 1.9e-50 | 81.15 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLR
M+SRYQSNPG DHWTTVKNILKYL+RTKDYML+Y KD+ILT YTDS+ Q DKDARK TSGSVFTLN GAVVWR +KQ+CIADSTME EYVAA E VWLR
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYETVWLR
Query: KFLIDLEVVPNMHLPITLNCDN
KFL DLE+VPNMHL ITL CDN
Subjt: KFLIDLEVVPNMHLPITLNCDN
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| E2GK51 Gag/pol protein (Fragment) | 4.9e-51 | 83.33 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
+VSRYQSNPG DHWT VKNILKYLRRT++YMLVY KD+ILT YTDSD Q DKDARK TSGSVFTLNGGAVVWR VKQTCIADSTMEAEYV AA E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
VWLRKFL DLEVVPNMHLPITL CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-08 | 29.77 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIK---DMILTRYTDSDLQIDKDARKYTSGSVFTL-NGGAVVWRGVKQTCIADSTMEAEYVAAYET
++SRY S + W +K +L+YL+ T D L++ + + Y DSD + RK T+G +F + + + W +Q +A S+ EAEY+A +E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIK---DMILTRYTDSDLQIDKDARKYTSGSVFTL-NGGAVVWRGVKQTCIADSTMEAEYVAAYET
Query: V----WLRKFLIDLEVVPNMHLPITLNCDNK
V WL+ L + + + PI + DN+
Subjt: V----WLRKFLIDLEVVPNMHLPITLNCDNK
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| P0CV72 Secreted RxLR effector protein 161 | 1.5e-12 | 39.42 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMI-LTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYE
++S++ S+P HW +K +L+YL+ T+ Y L + L Y+D+D D ++R+ TSG +F LNGG V WR KQ +A S+ E EY+ A E
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMI-LTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYV----AAYE
Query: TVWL
VWL
Subjt: TVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.9e-21 | 48.18 | Show/hide |
Query: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYET----
+VSR+ NPG +HW VK IL+YLR T L + D IL YTD+D+ D D RK ++G +FT +GGA+ W+ Q C+A ST EAEY+AA ET
Subjt: MVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVAAYET----
Query: VWLRKFLIDL
+WL++FL +L
Subjt: VWLRKFLIDL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-07 | 29.37 | Show/hide |
Query: VSRYQSNPGCDHWTTVKNILKYLRRTKDY-MLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVA----AYET
+S+Y P DHW +K +L+YL T D+ + + + L Y+D+D D D T+G + L + W KQ + S+ EAEY + + E
Subjt: VSRYQSNPGCDHWTTVKNILKYLRRTKDY-MLVYDIKDMILTRYTDSDLQIDKDARKYTSGSVFTLNGGAVVWRGVKQTCIADSTMEAEYVA----AYET
Query: VWLRKFLIDLEVVPNMHLPITLNCDN
W+ L +L + + P + CDN
Subjt: VWLRKFLIDLEVVPNMHLPITLNCDN
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